Array 1 467372-477235 **** Predicted by CRISPRDetect 2.4 *** >NZ_VMKN01000001.1 Litoribacter sp. XAAS-A1 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 467372 30 100.0 35 .............................. CGATGTCCCGACAGTCGGGTTTTTGATCTTTCATC 467437 30 100.0 36 .............................. ACGCAGGTGGAACTGCCTATGCAGCACTCCCCGAGG 467503 30 100.0 36 .............................. TAGTCGAAGCCAACCATTCCGTGGAAATCATGAACC 467569 30 100.0 36 .............................. ATTGTTACTGCTTTAATTTTTGCCATGATAATGGGT 467635 30 100.0 36 .............................. TTGCAAGGTTCGGGCATCCTTTTAACCAATACTGAA 467701 30 100.0 36 .............................. ATAAGCACCGACTCAAACCCAAGGCTATTATAAAAC 467767 30 100.0 35 .............................. TGGCTTTTCCAGTGATTCACGATGTCTCGACAGTC 467832 30 100.0 36 .............................. CAGACAGTTCTTTGGACTTCGATTTGGAAGGCACAA 467898 30 100.0 35 .............................. TCAGAGTATCAGAAGGACATAAATACATACGCTGA 467963 30 100.0 36 .............................. TTAAAGACGACCGTTTTTTAGGGGTTCAGATTTTCC 468029 30 100.0 35 .............................. AAAATGGGTTATACAATTTATGTCTCAGCACATGG 468094 30 100.0 34 .............................. AACAGAGCCAAAGGAAGAGCGAACGGTGAATTAC 468158 30 100.0 34 .............................. AGCTGTATGGGTGGTTTCAACTGTGTGCATTCAA 468222 30 100.0 36 .............................. AGGGTAGAATATACCTCGATAAAACCTTTGCCCTCT 468288 30 100.0 35 .............................. TTGCCGAGTGGGGTGCCCGTTTCACCAATGAGGGT 468353 30 100.0 35 .............................. ATTGTTATCGACCACTCCCTCTTGAAAAGTCATAT 468418 30 100.0 35 .............................. TTGATCACCTCGACCTCGGCAGGCTCTTTGGCAAA 468483 30 100.0 35 .............................. CGGGAGAGAGCAAACAGGACGGCAGCTATCTGCAC 468548 30 100.0 36 .............................. CGCGTTACCGTAATGTATAAAGACGCGATTAACCGA 468614 30 100.0 35 .............................. AATTAGGGATAACGCCAAATATTAAGGGAGATATT 468679 30 100.0 37 .............................. GTGGATAACAGTTATGGGACAAACAGTATTATTTATG 468746 30 100.0 35 .............................. ACGGAATTAGAGAATACAACGGCGAAGGATCCGTT 468811 30 100.0 35 .............................. AATTTCAGAATTTGCACAGGAACAGAAGGACCTAA 468876 30 100.0 36 .............................. AAGAAAAGGCAGAAGGGTATGCGGATTGGCTCCACC 468942 30 100.0 36 .............................. TTTTTCTTCCGTAGAAATCAACTGAAAAATCCCCAG 469008 30 100.0 36 .............................. ATGCTGAGCTTGATGCCAGATCTGCCAAGGTAACTG 469074 30 100.0 35 .............................. TTTATGTGTGGCATGGTGGTCTGCATTCCCATACA 469139 30 100.0 36 .............................. TTGTTTCGTTCATGGCTATTTGTGTTTTGCTTGTAT 469205 30 100.0 36 .............................. GCCACAATTTCCCCTATCCGTGAGTTATGTGCCATT 469271 30 100.0 36 .............................. AAATGCTAGGCTGGCAGGATGAGGGTTTTTACGCCT 469337 30 100.0 36 .............................. CAGCTCTGTCCAGCATATAAGACAGCCCCAGATAAC 469403 30 100.0 36 .............................. CAGTATCCAGGCATTACACCCTACAATACAAGGAAA 469469 30 100.0 36 .............................. TGAACCAGGTCTTCAAACCGCACTACAAAATACAGG 469535 30 100.0 36 .............................. AGGTTAATCGCTTGTTTTACGATTGCTGAAGTGAAT 469601 30 100.0 36 .............................. AGGTCCAAAAAGATAAAAACGACAACTGACAATCCA 469667 30 100.0 36 .............................. ATAACTAAAACTCCACAATACTCTTCATTTATCATC 469733 30 100.0 36 .............................. CAACTATTTCACCTCTACCCAAGACGGAATCGACAA 469799 30 100.0 36 .............................. AACCTATGAAGCGGCCAGACCAGCTTAAGGTCGAGG 469865 30 100.0 36 .............................. TCTATCACATCATTGTCCGTCTGCTCGGCATAGGAG 469931 30 100.0 36 .............................. AGGTATTCCTCCTTAGTAGGAGGTTCTAACCCGTCT 469997 30 100.0 35 .............................. AGTGAAGGTTCGGTGGAAAGACTTTGGAACTCTTG 470062 30 100.0 36 .............................. TCTATTGCACGGGTGGGTCTGACGCCATGAACATTG 470128 30 100.0 35 .............................. TTTTATTTTTTCCTGCCATTCCCCTCGGGAATCCT 470193 30 100.0 35 .............................. AAATCCGTAAACACGTAGCGGTAGCGGTCTTCCTT 470258 30 100.0 35 .............................. TAGGTTACTTTAAAATTACCGCCTTCGTTCTGATT 470323 30 100.0 36 .............................. ATAAAAAATGCTTATCATAAGCCTTTAACCAAAACT 470389 30 100.0 36 .............................. TGGCATCTTTTGTGGCCTGAGCTGCTTCGAAATCTT 470455 30 100.0 36 .............................. CCAGATCAATACTGTACTTAAAATCCCTGAGGTACT 470521 30 100.0 36 .............................. TAAAATGAGGCCCAATCCGTTTCCTTGAATTTTTCA 470587 30 100.0 35 .............................. AACTGCACCTCGAAGGTGGTTCCCCTTCGGTCTCC 470652 30 100.0 36 .............................. TCAAAACCCAGCAATTGCGTTAAAAATTGCTACAAA 470718 30 100.0 35 .............................. TTCTGTAACAGAATCGAAAAGAGTCCCAGAACTTG 470783 30 100.0 35 .............................. TTTAGCTCTCCTAAATTACTCATTTTTCGGCAGTA 470848 30 100.0 35 .............................. TTGAAGTTGGTCTGGTTGATCGGCCCCCCTTCAAA 470913 30 100.0 35 .............................. TAGGTATTGGTGACCGTTTTGCGCTCCAAACGCTC 470978 30 100.0 36 .............................. ATGATAGCGCAGGGGAGAGAGGTTATGGAGCACTTG 471044 30 100.0 35 .............................. ATGGAGTTTACTATTTCATCTTTCAGATCTTCTTC 471109 30 100.0 35 .............................. TTTTGGATATAAGGCAGGTGGGATTATGCCATACT 471174 30 100.0 35 .............................. GCTGATTCCGGAAGGCCTCCTCGACAAGGAGATTG 471239 30 100.0 36 .............................. TCCACAGATGAGTACCCCATATTCATGTGGGACGAA 471305 30 100.0 35 .............................. TCGGTCTTGGCCACCCAGCCCTTGCTGAGTATCCA 471370 30 100.0 35 .............................. ATGAAGGTGCAATCCAGAACTGCTCCGACTCCTCT 471435 30 100.0 36 .............................. ATTTTATTGTCAGTGCAAACACAGCATGAAATTCCT 471501 30 100.0 36 .............................. TATAAAGCTCAGGAGGCAACTTGTCAGCTTCTGGCT 471567 30 100.0 36 .............................. ATTTATCACAGGCCCATAAAGACCGCTATTTCTTGG 471633 30 100.0 36 .............................. CGGTTAATAAGGCTTCTTCCGCTAGTGATAAAGGGT 471699 30 100.0 36 .............................. ATAACTGTGGGATTCTCTGTCCTATGTACCATGCCC 471765 30 100.0 36 .............................. TTGATTGAAATAATTATAAACGTTTTCAACAAAGGA 471831 30 100.0 36 .............................. TTGGTTCCGGCTAGCTTTTCAATTGCTGATGCCATA 471897 30 100.0 36 .............................. ATGAAAAGGTTTAGAATAGGTGAAATTTTGAAGAAA 471963 30 100.0 35 .............................. GCATAGAATAATGAGGGTATCAAAGATCGCTTCAG 472028 30 100.0 36 .............................. CCAAAAAAGAAAACAATCAAAGGGTGTCATTCGATG 472094 30 100.0 36 .............................. TTAGAAAATACTATTTCCGTGCATAAGCTGACCATT 472160 30 100.0 35 .............................. CCTACTCTGCCTACGAATCTTATTTTGAATCCTTA 472225 30 100.0 36 .............................. CAATTTCCTTTAATGAGGATGTTTAAATCCTCCTCA 472291 30 100.0 35 .............................. TAGGCTTTGTCTGATAATTGCAGGATGCCACAAAA 472356 30 100.0 34 .............................. TGGTTAAGGAAAGACAAATGTCCCACAGGAACGG 472420 30 100.0 34 .............................. AAAGCTCCGGTATCGACAAACTGACCGGACGGTG 472484 30 100.0 36 .............................. CCGCTTACCCATTTGTCTTCCAGTATAGAGAGCAAG 472550 30 100.0 35 .............................. TTGATTTGACTTTGTTTACTATATCATCAATTTTT 472615 30 100.0 35 .............................. TTACGACAGAGGGTTTTTTAAACCGTGTATATGTT 472680 30 96.7 35 ..........T................... GGAAAAACATAAGTGTCATCAAAATGGCAACCCTA 472745 30 100.0 36 .............................. CAAACTGAATAGCCGTATGAAACGCGCAGAAGAGGA 472811 30 100.0 36 .............................. TCGCCACTACCTATAAAGTACTTGCCGAGAAACTCC 472877 30 100.0 35 .............................. CCACCTTTCTTTCTGCTCTCATCATAAGTGACAAA 472942 30 100.0 35 .............................. ATGATTAAGATTCCTGCCTGTATCTTAGAGGCAAG 473007 30 100.0 35 .............................. AATAGAAATTATAAATGGGATAATTCCCGTCAAAA 473072 30 100.0 35 .............................. ACATAATATGGCTGATTTTGCTCTGATTGTAGTTT 473137 30 100.0 35 .............................. TGAAATTTTACAAGGGCTATGAGTTGGGTTTTAGC 473202 30 100.0 35 .............................. CCGAAAACCCGCACATCTACGATCGGGTCAGTGAG 473267 30 100.0 35 .............................. GGGCTTCGATGTAGATCGACTCCTCTGCTGACAGT 473332 30 100.0 37 .............................. CCTCTTTGGTGCAGCAGTTCTCTCCAAAGTGGACACC 473399 30 100.0 36 .............................. ATTTCTTCGAGATCACTCAATCTCACTATTCGCATT 473465 30 100.0 36 .............................. GTAGAATCTCCATCAGAATTGTCGTGTCTCGCAATT 473531 30 100.0 37 .............................. TAGGGGAAATAAAATACAGGCCTTTTCTGCATGCCGA 473598 30 100.0 36 .............................. ATGTGAGGTTCTGGGGAATAAAGTGAGCAAAAGCGA 473664 30 100.0 36 .............................. GCGTAAATAAGACGTCCGGAGGTGGTATTTACCAAG 473730 30 100.0 36 .............................. AAGACCACCCCACGACCTATCCCAACCCCACAGAGC 473796 30 100.0 36 .............................. TCACTATGGTAATTCAAGGGGTGCATACTTGGTAGG 473862 30 100.0 35 .............................. ACGTTTTTTCTGTCTTTAATTTCAAATTCGGAAAC 473927 30 100.0 35 .............................. ATGTAATTCTTTGTTTCAGTTGGCATCTGTTTTTT 473992 30 100.0 36 .............................. TTTTTAGGTATAATGGTATTTGTTTGGGCTGATGAA 474058 30 100.0 36 .............................. CACTAAGCAATCAAGCAAAAGATTGGTACCAATCGC 474124 30 100.0 34 .............................. TGAATAACATACCCCTCATTAGCAAAGCCACGAA 474188 30 100.0 36 .............................. TCGTAAAAGAACACATCTACATAATTGGATTTACTG 474254 30 100.0 36 .............................. GATCGAAAGAAAGTCCATCCAGTTTGGAAAGAAGAT 474320 30 100.0 35 .............................. AAGCTCACCCAGCTCTTGCAGCATACCAACAAGCA 474385 30 100.0 36 .............................. GAGGTTTGTAAGTTTCGCCAAGCTGAACGAACTAGG 474451 30 100.0 36 .............................. AGTTATACCAGGCAACCTAGGATATGAAAAAGGTAC 474517 30 100.0 36 .............................. TTGGCTGCGATGTAGGTGCCTACCGTGATGGTCTTG 474583 30 100.0 35 .............................. TGATGGGTCTTGCGGACTTTTGGTTCCTCGCTCTG 474648 30 100.0 35 .............................. CAGGCTTAACATGATTAGACTAAAGCACATGGAAA 474713 30 100.0 35 .............................. CCTTTAAAACATCAGAGGTCTTTATCCTGGACTCG 474778 30 100.0 36 .............................. TCGTTAACCGCAAGATTGTTTATGGTTCCGTCAAAA 474844 30 100.0 36 .............................. ACAATTCCATCAACCTCAAGTACCACATCGAATACC 474910 30 100.0 35 .............................. CGTAGGTCCAGTCGCTTAGCCTCCATCCAAGGATC 474975 30 96.7 36 .........................A.... GCGCCTCCTGGTACTTGGGGTGAGCAGTTGCCAACC 475041 30 100.0 36 .............................. TGATAAACGCACTCATTTCCAATACCCTCCAAAATA 475107 30 100.0 36 .............................. TTGCAAAGTCACACTGGCTCGTTTTACGCTGCGGTA 475173 30 100.0 36 .............................. TTACGGAAGGTTTCGATTTTCCAGACCTTGAATTCG 475239 30 100.0 36 .............................. ATGAGTTTAAGCCCTTCGACCTCTTTCGCGTTGAAT 475305 30 100.0 35 .............................. AGATAATGATTACGATGTAGAGTATGGACGCGAAG 475370 30 93.3 36 ...A......T................... AATTTAATTCGCTTGTCAGGGACTTACCAAAAGATA 475436 30 100.0 35 .............................. AAGAAAAATGGAATACGTATATCAATTGTCTGGGA 475501 30 96.7 35 ...T.......................... CTAGGAATGCTCCCGGTGTCTCAGGGTCTTGGATG 475566 30 96.7 35 ...T.......................... GGGAAAATACCCCGATGGAGCCAAGCACGTTCTTT 475631 30 96.7 36 ...T.......................... GCTTTTCCAGGCTGTTGATAAAGTCCGTCCTGCTTC 475697 30 100.0 36 .............................. TTTCCTTAATTTTTTCCTCATAGGTCTGAGTGCCCA 475763 30 100.0 36 .............................. TTGTAATCCAGCAGGGTAATGGTTCGGGTAGGGTGG 475829 30 100.0 36 .............................. ATTTTAATCGTTTCCCAATCCATATGGGGATTTTCG 475895 30 100.0 37 .............................. ATGCTAGGCTTACCAGCTTTTCACGCATATCAGCAGT 475962 30 100.0 36 .............................. GCGGAAAGCTTTACGATTGCGTTGTTGACCTCATTG 476028 30 100.0 36 .............................. TCGGTAAGGAAGGCGGGATTGAAGACGGGGCGGGAG 476094 30 100.0 35 .............................. ACTATTTCGGTATCAATTTCATCCACCCCTTCTAG 476159 30 100.0 35 .............................. ATCAGGAATTGCAGAAAGCTACCGGTGCACTTTCA 476224 30 100.0 35 .............................. ATATCAAACAAGCGCCTAGCAGATGGATCGCATGT 476289 30 100.0 36 .............................. GGTGAAGCTGCCTGCTCATCTCCGCAGTGATGGTAA 476355 30 100.0 36 .............................. ACGACTATGAAAAATCTAAAAGGAAACCGTGACCTG 476421 30 100.0 35 .............................. TCATCTAGCATGTATGGGGTGATTTCGGGCTGAAG 476486 30 100.0 36 .............................. TTGCAAGGTCACACTGGCTCGTTTTACGCTGCGGTA 476552 30 100.0 36 .............................. TCCTCATCCACGGGGCCAACTACGTGCACCAGCTTC 476618 30 96.7 36 ...T.......................... TTGTCTAAATTCATTTTTGTGTTTGTTAAAATTGAA 476684 30 96.7 36 ...T.......................... CTAACTACTGCACTACCCTGGAGGTGGTGCACTAAA 476750 30 96.7 35 ...T.......................... CTGAAATCTCTCCGTGTGCCTGAGCTACCACACAC 476815 30 96.7 36 ...T.......................... AGAAGAAAGACCTGGCTACCTACGAGCTGATCAAGT 476881 29 93.3 36 ...T........-................. GGGTTTAAGGTCATTTCCATGGGTTGAACATTGGCA 476946 30 96.7 33 ...T.......................... AGGTGAATAGCCTGGATAAATATTTCATCAACA 477009 30 93.3 36 ...T............G............. AGGCAAAACCCTGGACAATCAAGAGGTGAACTTTAA 477075 30 90.0 35 .C.T............G............. AAGGCTCCAAGGTAGCAATAGCCAAAGACCCCAAG 477140 30 93.3 36 ...T............G............. AACGGCTTTTCCCATAACTTTGCATAAGTTACTATA 477206 30 93.3 0 ...T............G............. | ========== ====== ====== ====== ============================== ===================================== ================== 151 30 99.5 36 CTTCTAATCGCACCATATAGGAATTGAAAT # Left flank : TTCAAGGTCTGGTGGTAAAAGAGAGAAGCTATGTATGTAATATTGGTATATGACATTGGTCAAAAGCGAGTTGGCAAGATGCTCAAGCTTTGTCGCCGTTACCTCAACTGGATACAGAACTCTGTCTTTGAGGGGGAGATCACGCCTGTAAAGCTGAAGGAACTAAAAGCAGAGGCAAACCAATTGATGAAGAAAGGGGAGGATAGTATGATTATCTTTAAGAGCAGGGAAAAAAAATGGCTTGAAAAGGAGGTAATTGGTGAAGAGAAGAATAATCTAGATACTTTTTTGTAGTTGTCGGAGGAGTCCTTAGCAGTGAAAGCATAGGTAAGATTTTCTCTGATTTTTGTGGAAAAGTTCAAATAGGACAGGCATTGCAGGTTGTCGAACACTAGGGGAAAATCGGGTACTGCCGATCGACGAAAATCTTATCATTTTTATTAACTTTGAAAGGGTCCTTGAAGATAGTAGACGGTCTTTTTGCCCTCTCAAACCAACGG # Right flank : TACCGCAAGGCCTCCGAGACATCGTGGCTTTTTTGGGTTTTTGAAGACCAAGTGCTAATATACTAAACACTCCACTGCAGCTCCATCTCCGGAATCTCATCATACGTCCTGCCATTGAGCTCCCTTCCTGCCTTCTTTTTGTTTTTACCGCCCCACTGCTTGAAGAAGAATGCTACCCCGGACTGCTCCCTGTTCCGGTTTAAACTGTGCCGGCATTGGTCGAAGAACCGGTTAATCCGCTTTATTTTCCAAAGCCCGGATCATAAATTTTTCCATCGACTATCTGTCATCCCCTATTTCTCAACAAAAAAATCCAAGTAAAGCATAACTATTCAATTTAAAAATTGGCTTTTTTACTAATCTTCTTGCAAAATACCCCAATCACGGTATTGTGGGGGGAGGGGGAATGAGGTAGTTTTAGGCCAATAATGAAAAAAATAAGATTAACCAAGGATGCTGAATAAAAATGGATTTGTGTACTGGGTTGGTTATTTACGAGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTAATCGCACCATATAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 760456-763265 **** Predicted by CRISPRDetect 2.4 *** >NZ_VMKN01000001.1 Litoribacter sp. XAAS-A1 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 760456 37 100.0 36 ..................................... CTAGAAAAATCTAGGAGATCTGGATCCTGTTTTTTA 760529 37 100.0 36 ..................................... TTTGGAAGGAGCGAAAGCACCAAATACAAAGGAATT 760602 37 100.0 36 ..................................... GGTAGTCCCTGACGGTGTTCAGGGTGTGGTCTTCAC 760675 37 100.0 36 ..................................... TTATACCCTGGCAAGGCCAAAAGAAATCCAGCTCCT 760748 37 100.0 36 ..................................... TAGCCATCAAAGCAGAGGTATGCAGGGAAAACATCA 760821 37 100.0 37 ..................................... AGGATATCTATCCCGTTTTTGATACTGTCCGGCCCTT 760895 37 100.0 37 ..................................... AAATTACAATGTCCTATGTAAACTTTAAATTATCCGA 760969 37 100.0 36 ..................................... TCTATTGAAGTTAGATTTTGATTTTTCGGGAGTTGG 761042 37 100.0 35 ..................................... TAGCCTAGCTCCTTGCAGGCCCTCAGCCTCATGTT 761114 37 100.0 37 ..................................... AAGACAAGAAAAATTAAGAAGTAACGCAAAGAGAATT 761188 37 100.0 36 ..................................... AAATGCCTGATTTGCCCCGTCTGGCGTCCTTTTCCG 761261 37 100.0 36 ..................................... AACACTTCATCAAATGACAAAAAAAATAATTATTAG 761334 37 100.0 36 ..................................... ATTTGTCTGGTAGCTCCATGAGCTCCCCGCTCTACA 761407 37 100.0 37 ..................................... TACCATCAAGAAAGCTAAACGACACGGGTATGACAAT 761481 37 100.0 37 ..................................... CCAATTGGATAGGCAAGTACACGGACTTTCAGGACAA 761555 37 100.0 36 ..................................... GTATTTATTTTTTCTTGTTTGCATTTTTCGCCTTCA 761628 37 100.0 36 ..................................... TATGAAACCGTATAGGGTACTTTCCTTAGACCCTGA 761701 37 100.0 38 ..................................... GTGGCTAGATAGAGGTCGACGGCTCCGGTATGCTTCCA 761776 37 100.0 38 ..................................... AAAATATCCACTGAGGTGAGCAGGTGTTCGGTACACTG 761851 37 100.0 36 ..................................... TTCATATGCCAAACATAAAGTCCTCTTCTCTTCCGC 761924 37 100.0 36 ..................................... CCCACATGGATTTAATAACCCTGCTGGATGTGCTGG 761997 37 100.0 18 ..................................... ACTATTCCGTTTAATGCA Deletion [762052] 762052 37 100.0 37 ..................................... ATGGTTCACAAGTAACAAGTTCAATCCAATGTTAGAA 762126 37 100.0 36 ..................................... GATTTTTAGCTTGAGATATTAATAGGATCATTCTGA 762199 37 100.0 37 ..................................... AGTCGAGGTTTATTGCATTAAGTTCAAATACATTAAA 762273 37 100.0 36 ..................................... TACGCTTGCTGCTGCATGTTTTTCTAATTTCTTGAT 762346 37 100.0 37 ..................................... TCGAAGAGGAACCTTACGGGCTTCTGGGGTGATCCCC 762420 37 100.0 36 ..................................... TTGAATGGAGCCAAAGAGGGTTCCTGGGACTTCCTG 762493 37 100.0 36 ..................................... TAATCCAAAGTGTTTCTTGTGTACTGCATTGTCGTA 762566 37 100.0 36 ..................................... ACCCATTACACCATGCCAGGAGGTAGACCAAGACAG 762639 37 100.0 39 ..................................... ACCCTCTAATCCCAGCACTATGAACCATTTGATGATCGA 762715 37 100.0 37 ..................................... AAAGTTAATCCCTTATTGTTTTACTAAGGTAGTAATA 762789 37 100.0 36 ..................................... TCAAAAACGGTACCGGTGGAGATGGCGGTTCTGGTG 762862 37 100.0 36 ..................................... TTGAAAACAGAACCTCATTTTTGGGTTTGGCCAAAG 762935 37 100.0 37 ..................................... CACCGATGCCGAGCTCGGTATTTTGAAGGAGCTTGAA 763009 37 100.0 36 ..................................... TTAATTTTGAAGTGTTAGAATTGAATTAGCCCTTTT 763082 37 100.0 36 ..................................... CCGACAGCAGGGGGGAGCGGCACGAGTCACCCAGGT 763155 37 100.0 37 ..................................... TTACGTGCACGCCAGTCCACCCTTAAAAACAAGGTCA 763229 37 97.3 0 ...................................G. | ========== ====== ====== ====== ===================================== ======================================= ================== 39 37 99.9 36 CTTCCAGAGCCTATTCCATCATAAGAAGGATTGAAAC # Left flank : CACCCCTGGATTACAAATTTGCTCAGTATAAAGAGAAAATATATGATACCTATAGGACTCAGTTGATCTGCTATGCCCTGCTTATTGAGGAAAACTTTGGGAAGGAAGTTCATAAGGGCTTTCTAGTTTATACCCGCAGCAAACACAAATTGGTGGAGGTTTCGATAGATCCAGTAGATAAAGAAAAAGTAGTGAATGCTGCAGAAGATATATTTGCCATAATCCAGGAAAACAGGTTTCCCAACGCTACCAAATTTAAGAGAAGATGTGTAGATTGCACCTATCGGAATATCTGTATAAAATAAGGGTGCTCCGGGTTCAAATTTATTTTGATAGTATAAGGAATTGACCGTAATTGCCTGATTGTCAGTTGTTTTTTAGTTCGGAAAATTGGTTAAAATTATGGGAAAAAGTTCTTTGACATACTGTAAAAATAAAAAAAGAACGTTTGGGATTGTTTGTCAAAAGGCTAATATACAAGGGGTTATAGTGCTGGGCGA # Right flank : CGAAGTTGGCGAGAGTCGAACTCGTCTGCTGTGATTCCTATCCTAAGATAGCTAGTTGAAAGCAGTTCACGCCTGCAAACCTCACCAAATTTTGCCTTACGATACAATTTGTTTTAGTATAATTATCCCTAAATTGCATGGAAATAAAATCAACACCATGGCTTTTTCAAACATTCAAATTGAAGTAATAAAAAAGGCTGGAGAAGCCTTTTTACTCTCATGTGAATCGCCCGAGGATCTCAGGGGGCAGGTGGAGGTGACCTATCGGGTGGAGGGGAATAGTGTGCTCCTCCATGAAGGCGCCCCAAGTGGGATAAGCCGGCTGAAACCTCTGAAATGCCTGTGGCCAAAGCCACCTTCGTCAAGACCCACTCCCACTGGAAAGTGTACTGGATGGGTGGAAACCTTAAATGGCAAAGCTATTCGCCCAACCCTATTGTCGAATCAGTTGAAGGGTTTTTTGATCTGGTAATACAGGATGATTTTGCCTGCTTTTTTGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCAGAGCCTATTCCATCATAAGAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.10,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //