Array 1 60401-67476 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPOI01000011.1 Eggerthella lenta strain MRI-F 37 MRIF37_contig_011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 60401 33 100.0 34 ................................. TGCTGTGACCAATCTGCTGCGGCGAACTGGTACG 60468 33 100.0 33 ................................. TGAACGAAACGTGCAGGAACCACCGTAACCATG 60534 33 100.0 33 ................................. TTGAAGTCCTCAAACGTCATCTTGTACAGCTGC 60600 33 100.0 34 ................................. GTGTACAATTGTCAAGTGGTAAATGATGCTTTAT 60667 33 100.0 35 ................................. CCCTTTATTACAGGTACATAAACACCGACCGCGAT 60735 33 100.0 33 ................................. TCATCACCTATCGCAACCTTTCTGATGTACCCT 60801 33 100.0 35 ................................. CTAAAATCCCAGATAGTCGAACACGTTGTTGAAGA 60869 33 100.0 33 ................................. CTCGATGCTGCCAGAAACAGGCGCTTCTGGCGT 60935 33 100.0 34 ................................. AATCTCTGGTACACGGTGTTGTAGCGATTCCTGT 61002 33 100.0 35 ................................. CCGTGAAGCTGCAAGCCCCTCTTGAAACTGTCGAA 61070 33 100.0 34 ................................. ATGATCATGCCCTACTACAACCAAATGTATTTGT 61137 33 100.0 35 ................................. CTGCCGATACTGTTCGATCTGCGCATTGTAATTAC 61205 33 100.0 36 ................................. ATCAACAAGCAGATCGCGCTGAAAGACCTGTTCGTC 61274 33 100.0 34 ................................. ATCACGCGCGCAGAGTACAAGACGGCCAACACGG 61341 33 100.0 34 ................................. CTACGAAAGGCTGAACAGGTACTACAAGAACTAT 61408 33 100.0 35 ................................. ATTTATTACCGCTCACCAGAGACATAATAGCGATA 61476 33 100.0 36 ................................. CCCTGATGGAGCACAATGGTCAGCGGCTCATACGTC 61545 33 100.0 33 ................................. AAGTATTCTTGCTGATCTACGATATTCGCGCCG 61611 33 100.0 34 ................................. CTGCATGACGAGGATATCGCGCTCGACCCGATCC 61678 33 100.0 33 ................................. GATCATCAACTGGATCGATGCGAACCTGCAGTG 61744 33 100.0 34 ................................. ATGACGATATGGTAAGGAGGAGCGCATGAACCAG 61811 33 100.0 34 ................................. ATTCCCTTTGGGAACGGCCAGTGGAGTTCGCCGG 61878 33 100.0 33 ................................. ACGTCCAGGTTGCCCGCGTATCCGGGCACCTGC 61944 33 100.0 34 ................................. TCGAACATGACGTGCGGGATGCCGATCAACCGGA 62011 33 100.0 34 ................................. CTGCAGCGCGGACATTGGGCGGTTGCGAATAGCG 62078 33 100.0 35 ................................. ACCGTCTCGCTCGTTGCCTTGGTAGCCGTGTTCTC 62146 33 100.0 33 ................................. CAGCATATGGAATTTGACATTTTGACGTTCGGG 62212 33 100.0 32 ................................. CCGGGTAATCCGATCTGATATCGCGGCGCTTG 62277 33 100.0 35 ................................. ACTGTTCCGGGCTGTACGCGTAGGCGATCCACGAG 62345 33 100.0 36 ................................. GGGCTCCGCCTGGAGAATATAGAAGAGTACTGGAAA 62414 33 100.0 34 ................................. AACCAAGGGGGCGTCGATCAGAACTGCATGCGCT 62481 33 100.0 36 ................................. TGAAAGCCGCGAGCAACTTGCGCGAGCAGGCGCAGC 62550 33 100.0 35 ................................. ACGTCCTCCGCCCGGGAATAGCGCGTGAGCTTCGC 62618 33 100.0 34 ................................. GAGGATGCGCGCTATCCCATCGACGGTTGCGGCG 62685 33 100.0 33 ................................. AACACGCAGTTAGAGTAAGTCATGCAGTCGCAC 62751 33 100.0 33 ................................. CTGCCGATACTGTTCGATCTTCGCCGAGACTTC 62817 33 100.0 33 ................................. AAGCCCGCGATATCGTCCTTGTTCTGCGTCACC 62883 33 100.0 34 ................................. ACGCAGCTCGGTATGCTGAATTCGTCTAGCGCCG 62950 33 100.0 34 ................................. TGAAAGCCGCGAGCAACTTGCGCGAGCAGGCGCA 63017 33 100.0 35 ................................. CGCATCAAGGTCGATGCGGGCGCGTCCAAGAAGGA 63085 33 100.0 34 ................................. ACGTCTTTTCTAAAGTCGATGCAAGAGTATTTTT 63152 33 100.0 33 ................................. ATAATCTCGGTTTCGACATGCACGCGGTCGCGG 63218 33 100.0 34 ................................. ATCAGCACCAACGCGTGCTGCTCTGGGTTGCGCT 63285 33 100.0 34 ................................. CCATGCCCATTGCCCACCACAGAACCGGGTCATT 63352 33 100.0 33 ................................. CGGTTTGATCTCCGGCATCTCGAATCCCTCCAT 63418 33 100.0 33 ................................. TGTCCCGGGACAGCGAGTACAGCGAGAAGATGG 63484 33 100.0 34 ................................. AAGTACTCCTGCTGATCGACGATATTCGCGCCGA 63551 33 100.0 33 ................................. CTTATTGGCGATCTCAACACCAACCGGCACGAA 63617 33 100.0 33 ................................. CTCCATACCGTCACGCCCCCGAATAATAGCATC 63683 33 100.0 33 ................................. TCGAAATACCCTTGCTCGAATTCCGGCAATTCG 63749 33 100.0 33 ................................. TGATACCACATGCCCCCGTATTGCATGGCGTGC 63815 33 100.0 35 ................................. CGAAACGATCGACGTAAGTACGGCTGTTGAGCGTG 63883 33 100.0 35 ................................. TCGTCGAGGGCCATGTCGCGTTTCGCCTCGTTGGT 63951 33 100.0 35 ................................. TACAAAGCGAAGGACGCTATAAAGCATATCCGCCA 64019 33 100.0 34 ................................. CGTCAACTACGAGGAAAAGATCCCGTGGGACATG 64086 33 100.0 34 ................................. CATTCGGAAGATAAACCGCCGCGCGAGCAACACA 64153 33 100.0 36 ................................. GCGCGTATGCGGAGCTTTTCAACGTCACCGAAGCGG 64222 33 100.0 32 ................................. ACGATCAGCCCGCCGTCTATCCGATGGCGCAG 64287 33 100.0 36 ................................. GAGCGGGACTGCGCCGAGGCTGTCTACGACGCCAAC 64356 33 100.0 36 ................................. TCGCTCGCAGCAGTGATGCTATGCGTGCCCGAACTC 64425 33 100.0 32 ................................. CCAAGCAACAGGTCTCCCAAGCCGAGATCGAC 64490 33 100.0 36 ................................. CAGCGGCGCTGGCATGGATTATTGCGACTTGGGCAC 64559 33 100.0 34 ................................. CCGTTTTGTCTGCCCTGGGACTTGGTGGAGCTTG 64626 33 100.0 33 ................................. CGAGGAGTTTCGCCCCTATCGCGATCCGTCCGC 64692 33 100.0 35 ................................. TTCCTGCACGCAGAGGGCGGGCCGCGCACGTGGTG 64760 33 100.0 33 ................................. TGCACACCCTTGCCGAAGATGCTCAGCATCGGG 64826 33 100.0 35 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATTC 64894 33 100.0 34 ................................. TCGGCAAATCTGGGACGCTGGAAGCCGCTGAGGC 64961 33 100.0 34 ................................. GAGCTCGCCTGTGTACCCGTCGTTGGTGACGATG 65028 33 100.0 34 ................................. ACGTTGCCCGGATCGAGCTTGAGCGCGCGCTCGA 65095 33 100.0 34 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATT 65162 33 100.0 32 ................................. AGCCCTCGCTCGCAGCCTCGTAGCGAAGCCTG 65227 33 100.0 34 ................................. AGCATCTCGAATTTCGCGGCGAGCGATTCGTTGC 65294 33 100.0 35 ................................. AAGGCCGCCAACGCCAAGTACAGCCTGGAGGAGAC 65362 33 97.0 33 ........T........................ AAAGCAGTCATCACAACGAGAGAAAGGGGCATC 65428 33 100.0 33 ................................. AGGTACGCGCGCGCCCTTCTCGGTCTTGTAGTC 65494 33 100.0 35 ................................. TCGACGACGGCCCTCACGTCGTCGATGGTGCGGCC 65562 33 100.0 34 ................................. TATCACATGGAGCGGACGAGGTTCTCCGCGCGAG 65629 33 100.0 34 ................................. ATCTTGGGCGTGCCGGGAGCGGGCAAGAGCTTCA 65696 33 100.0 34 ................................. ATGGCGAGTACTTGGACGTAGTTGACGGTCGCCG 65763 33 100.0 35 ................................. GACTTGGCGTCGGCCGCGGCGCCGGACAGCGCCTC 65831 33 100.0 33 ................................. GACAACGCGATGGCCAAGGTATCGACCATCGCG 65897 33 100.0 35 ................................. CGCTCGCAGCATAACGAAACGTTGGCTACAGCCGC 65965 33 100.0 35 ................................. ACGCACTCGTAGACGTCGGCCGGGGTGTAGCAGTC 66033 33 100.0 36 ................................. AATGAATCGATCAAGCGCGCCAACGGCGAACTCACC 66102 33 100.0 34 ................................. GAAACCGTGCGCGACGGCGGAAGCAAGCTGGACG 66169 33 100.0 33 ................................. CGCGCCACAGAAGGCGCACCTTGCGGGTATCGG 66235 33 100.0 33 ................................. GGAGAAACATATAAAAAGGACGGTGTAATCTCG 66301 33 100.0 35 ................................. CAGTTGATGTCTTTTCGCAGGTCGATGGCGCACGC 66369 33 100.0 34 ................................. AAGCCGACGAATACGCCGGCGAACGCCATTCAGC 66436 33 100.0 25 ................................. AGGCCCTGTCGGCCCGGTCGGCCCT Deletion [66494] 66494 33 90.9 34 ...GGC........................... ATGTCGGCCTTGGTGAACTCGGACAGGTCGAAGC 66561 33 100.0 33 ................................. ATGCTACTAGACGATTTTTTTGTTCCGAAATTG 66627 33 100.0 35 ................................. ATGATGACCACCGACTCGTCCGCGGTTCCGTAGAA 66695 33 100.0 35 ................................. TAACAGACCGAAGCCCGTCCGGGCGGGTCGAATAC 66763 33 100.0 35 ................................. CATGTGTTGCGTCCTACCGCGTCACTGATGATGCC 66831 33 100.0 34 ................................. ATCGTGTGCGGGACGAACGACGACAAGCTGGACG 66898 33 100.0 34 ................................. GAGGACGGTGTGGATCCATTACGACATCACCGGG 66965 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 67035 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 67104 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 67170 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 67236 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 67307 33 90.9 36 ..T...T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 67376 32 93.9 34 ..............-.................C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 67442 33 75.8 0 .....GTT.A..T.....C.C..........G. | T,C [67446,67458] ========== ====== ====== ====== ================================= ====================================== ================== 106 33 99.5 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : TTGCGCGGCGATCTAGATGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCGGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTAATGACACTATATGTTGATCGAAGCAGTAAATTTGCACATAATATTGC # Right flank : TCGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCCCTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //