Array 1 122945-121277 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADQTV010000005.1 Corynebacterium diphtheriae bv. mitis strain 07-19 NODE_5_length_149866_cov_53.048665, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 122944 28 75.0 25 TCA..CA.................TC.. GGCGGTCCAGTTCTCAAAGTCCCTG A [122925] Deletion [122892] 122890 28 85.7 33 ..........C...GAC........... CAATACATGAGGATTGACAGTGCTGATTATGAC 122829 28 96.4 33 ..........C................. ATACTGGGTGTGTCTCGTGGATCCGTTAACAAC 122768 28 96.4 33 ..........C................. AAGGGTAGCGTGCAGTCACGACAAAACCAAGGC 122707 28 96.4 33 ..........C................. GCTGGGGGAGATCAAAACCGCAGGGACGAACGG 122646 28 96.4 33 ..........C................. CCGGCGTCGGCTTTTCCAGCTCTGGCCTTGAGG 122585 28 96.4 33 ..........C................. CATGATGCCTAGCAACCGATCTTGATTAGTCTG 122524 28 100.0 33 ............................ CACAAGAAGAGCTAAAAAGGGCAATCCGGCAGG 122463 28 100.0 33 ............................ CACCCCACAAAATTCGGCACCGCTATGCCACTG 122402 28 100.0 33 ............................ CGTACATGTGGACAGGTCAAGATGACCAAATGG 122341 28 100.0 33 ............................ GCCCGCGTTCGAGTGATCGCGGAAAAGCTTCAC 122280 28 100.0 33 ............................ ATGTGGTGGGATGCGGTATGAACTGTTTCTCGG 122219 28 100.0 33 ............................ GGAACAACAACGAGACTTTGATACAACCCTTGC 122158 28 100.0 33 ............................ GACCGCTATAACGACCTCATGGCAGACCGGTAC 122097 28 100.0 33 ............................ TAGATTTTGCACGCCTATTGGAACATGTAATCA 122036 28 100.0 33 ............................ GATGAGGCGTATGAGCTGACCGCCACCAACGAG 121975 28 100.0 33 ............................ GGGTGGTCGTTCCCTCATGCACCGTTTACGGAC 121914 28 100.0 33 ............................ TGGATGGTCTTACTATTGCCGGTGTGCAGGGTC 121853 28 100.0 33 ............................ GTGTTGGGCGAAGAGGATGGTTTTTTGGGTTAG 121792 28 100.0 33 ............................ CTGAATCCACCGTGAAGCGCGCCGTAAAAGAGC 121731 28 100.0 33 ............................ TGCGGCGCGATCACATCTGTCACATCGTGTTCC 121670 28 100.0 33 ............................ GCGACGCCGGCTCAACGTGGTTTCACAATCTTG 121609 28 100.0 33 ............................ CCCAGTGGGATAAGTCCATGGGTGGCCGTCCCG 121548 28 100.0 33 ............................ TTATCGCCGTGGAACGTAACGGCCTGCGGAAAG 121487 28 100.0 33 ............................ CCCAGTGGGATAAGTCCATGGGTGGCCGTCCCG 121426 28 100.0 33 ............................ GTCCTGATGTTGATCCCGACGATCTCGACGCGG 121365 28 100.0 33 ............................ TGACCTGCGCGGCGGTCGCATACCCTACCGGCG 121304 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 28 28 98.0 33 GGCTCATCCCTGCTAGTGCGGGGAAAAC # Left flank : TACATCAAAAAGCTCGAAGCGATCAGCGTAACGATCCAAATAGTCTAGGACGACCTGATCTTTCCCTTTTCGAGCAAGACGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCACGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATAGCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCCGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCATCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTTCCACAGAATACACTCTATAGATATTAAAAGTTAGTTTTTTCAAAATTTTTTAGTAGAGCCATCATTTACTGATTTCTCTGAATGAAAAACACAGATTCCAAAACCCGTTCTTCAACAAAGAT # Right flank : ACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTCTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTATGCGTCTTCCTTTGGGCAGACTTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTACACGAGCCTCTCCTCTTTCGTCGAAAAGCAACGCAACTTGGCCTTTAATCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGAATCTCTACGTGTCATTCGGGTTGGCAGGCGCACTGTGTTTCCAGCCAATGCCTCAGTTTCTTTCCAAGTAAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCTGCTAGTGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //