Array 1 39556-40704 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027432.2 Caminibacter pacificus strain TB6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 39556 30 100.0 36 .............................. TATACAAATTATACAGCTAAATGCATAACAGTATAT 39622 30 100.0 35 .............................. AAAGCAATCATCCACGCCGTAGCTTCTTTTACTTT 39687 30 100.0 36 .............................. AGGAATTCGGTGTTAGTTTTAGAACTATACAAAGAA 39753 30 100.0 36 .............................. CTTAATTCTTTTATTACTTTTTTCATTTTACTCTCC 39819 30 100.0 37 .............................. GCTAAAAAATTCGTAGACGGAATCGACTTTTCTAAAA 39886 30 100.0 36 .............................. TCGAGCCAATCAGGAGAAAAAATGCCGTCGCCTTCT 39952 30 100.0 36 .............................. AGCGTTGAAGTAATTGTTTTGAATATCGATAGCCCG 40018 30 100.0 37 .............................. TTTCCTTAACTTCCGAGCTTAATACTTTACCGACAAT 40085 30 100.0 37 .............................. ACGCTATTTTTGACGCAAAAAATGAGTATGAAAATGA 40152 30 100.0 36 .............................. CTGCTTTAATTAAGTTTTGAGCTTTTTTTAGCTTTT 40218 30 100.0 35 .............................. ATAGCGATGATGAGAGAGTGGAGAAGAGAGAGGGT 40283 30 100.0 35 .............................. ATAGCGATGATGAGAGAGTGGAGAAGAGAGAGGGT 40348 30 100.0 35 .............................. GCCCTGTTTCACGAAACGGTTATTTTCAAGCCCTT 40413 30 100.0 37 .............................. AAAGCGATATAATCTTAAATCTCTTATTCTTATACTC 40480 30 100.0 36 .............................. TCTGTTACGGGGTCGTTTTCGATGTTCGGAGTTGTT 40546 30 96.7 35 .............................C AAATCTATATCTCTGCTAAGAATAGGCGTTTTATA 40611 30 96.7 35 .........................A.... ATTTTAAATCGCTTTTAAAGCTCACGCACATATGC 40676 29 83.3 0 ..T...........TT.......-....T. | ========== ====== ====== ====== ============================== ===================================== ================== 18 30 98.7 36 ATAACACCGACACACCTGGAGTATTGAAAT # Left flank : CGCAATAGAGTGCAGAATCTTAGCCGAAGACCCGGAAAAATTCATCCCAAGCCCCGGAAAAATCCAAAAACTATATATCCCTGGAGGAAAAGACGTAAGAGTCGATACTCATATTTACGCAGGATATATTATTCCTCAATATTACGACAGCTTGATAGCCAAAGTAATCACATGGGGAAGAGACAGAAACGAAGCTATCGAGATTATGAAAGAAGCTCTTAGAGAATTCAAAGTCAGCGGAATAAAAACGACTATTCCTTTCCACCTAAAAATGCTTGAAAACGAAGACTTCCTAAACAACAACTACGATACGAAATACTTGGAAACAAAAGGGATGGCATAATCCCTTTTTTCCAACCTCAATTATTGACAACTCTCTAAATTCTTCGATATAATCGGGTAATAAAAAGATGTTTGAGAATTTTTTGTTTTTTTGAAAAAAGATTGGAAAAACCCTAAAAAACGGGACGAAAGTATAAAACTTCCCCGAAAAATAATGC # Right flank : TTGTGGAGTAATGTGTATAGCATAATACACATTAGGGGGTGAGGAGTGGTTTTTTGGAAGTGGATTTTAAGAGGATTTTAGTATCGAAATAGTAAAAATAGTTAAAAATATAATTTTTTATTAAAAAAATAATATTTACTATTAAAAAAATATAAAAGGATTATAAAAAATTATAGAAAAATTATATTTCTTATTAAGAAAATTATAAATAAATTATAAAATAATATAAAAAAATTATATTTATTATTGGATTTTTAATATTTTTGACGGAATGTTTTATATTTTTTGTAGTTGCAACCGATTATATTTTTGAATATAATATTTTTAGCACTATTAAGGAGTTAAAAATGTATGAAAAAAACGAAACTTTAGAAATCCTCGACAAACAAAACAAGGAAATAGTATCAGAAAATCAAAAAATCCTCCAAAAGCTCGATGAACTTGCAGAGGAAAACAAACAACTCAAAAGCGAACTTGAAGAGGTAAAAGAACAACAACAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAACACCGACACACCTGGAGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 2 167777-168138 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027432.2 Caminibacter pacificus strain TB6 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 167777 30 100.0 37 .............................. TAAAATTTCAAGCTGCTTTTTAGTAAAGCAGTGTTTG 167844 30 100.0 36 .............................. GTCTTTTAAAGACTCGGCAAAAGCGCCTGGTTTTAA 167910 30 100.0 36 .............................. ATTTCAAAAGCCTCCGTAAACTCTTGCCCGTCTTTT 167976 30 100.0 37 .............................. ACTATAAAACTCATATACACCCCTTAATCAAGGTCAA 168043 30 100.0 36 .............................. ACGAACACATCGACGAAATAAAAGGCGCTCTTAAAA 168109 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 100.0 37 ACCAACCAATTACACAAGATGTTTTGAAAC # Left flank : TCGTGCAAAAACTCGCATAATTCGTACATTTTTTTGCTAACTTCAAGTTCTTGAGAGCGAATCGTAGAAGTGCACGAGCTGCTTGGAGATACGATATATTCGTAATCTTTAAAGATTTCGTTAAATTGCTCGGGCAAGGTTGTAGGCTGCCCGGAATTAATAAAAGGCTGTCCGCAGCACGTCTGGTTTTTAGGGACGCTTACATTTAATCCGAAATGCCTGAGAATTAAAAGAGTTTTTCGGGCAATTTCGGGGTTTAGCTCATTTATGTAACACGGAACGTGAAGGGCTATTTTCATCTACCGCCTTTTTGGGAAATTATAAAATATTTACAAAAAAAGAGCAATTTGTCCTGGTGAGTAAATATTGCAAATAATAAAAAAATGCGCTATAATCGGGAAGATAAAAAGATTTTTGACAGTTTTTTGTTAATTTTAAAAATCACTGGGCACGTACCGTAAATGCGGTATCGGAAATTTAAAAAGCCCGAAATTTAATGT # Right flank : CAAAAAGAAAGTGCTAAGAGAGCAGCAGCATCAAAAGAAAAAGTTATAAACGCAGTTAATTTATTAAAACTTCAAGGAGAAGAAATAACACCATACAAAGTAGCAAAAACCGCTGGGATTAGTTATAACACAGCTAAAAATAGCTTTTTTATTGAATGGACGCACCTTTTTGGAGATAAAGAAGAATTATAAATTATAAGATAAACAAAAATAACTAAAGTTATTTTTGTTTGTTTACTTTCTTCCCATCCTTAAATACACTCTCACTACCATTAGGATTTGTTCTTATCACTATTTTTTCACCTTTTTCATTTTCATATGTTCTCCAAGTTCCGCCTTGTTTATCTGTTCTTTCATGTTTTTTATTCCATCCCATGTCTTCTCCTTATCATTAGTGTTTACAATTTAAATTTATTAATAAGGTTCATATCCACAATTAGGACACCATACTAAATTTTCTTCTCTGATTAAATAAATTCCACATATCGGACATCTATTAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACCAACCAATTACACAAGATGTTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 3 811243-813114 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027432.2 Caminibacter pacificus strain TB6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 811243 30 100.0 37 .............................. CCAATTCTTGCATTACGAGGTATTGCTATATCTTTAT 811310 30 100.0 36 .............................. GCTGTAAGGTTTTCGACTTTGTCTGTTGCGGTTGTA 811376 30 100.0 38 .............................. TTTTTTATAAGTTTTTCCGTGTCTTTGTTCCCGAGCAA 811444 30 100.0 37 .............................. AGATTATGTTTAAACTCTTTCTCAAAAGTCTGCTCGG 811511 30 100.0 37 .............................. ATATTCCCTAACGGGGGTTGAGCCTGAACTTGAAGGC 811578 30 100.0 37 .............................. TTTCGTATTTTAATTTTTCCAATTTAACTCCTTTTAA 811645 30 100.0 34 .............................. AAAGCAACAGCGTCAAGCTCACTCAAATCAATCG 811709 30 100.0 34 .............................. TCTTAGAATAGGCAGTTTTAACGTACTTTTTAAG 811773 30 100.0 36 .............................. TTATAATCTAAAGACTTAGTTAAATACTTAGTAACA 811839 30 100.0 38 .............................. TAGTCAAATCTCCAGCTCTTTACATCTTCTTGTGTTAT 811907 30 100.0 34 .............................. TTTAGAAATGCTTGGACTTGACGAAGAGGGTCGG 811971 30 100.0 34 .............................. TTTGAAGAGAGCTACGAACAAATTTCTTCCCTAT 812035 30 100.0 34 .............................. GTTTTAAGCGTTTCATTTTCTTTTTGCTTATTTA 812099 30 100.0 37 .............................. AGGAAGGAGAAGTCGAGATAATTAATGCAGGAGAAAA 812166 30 100.0 38 .............................. CCAAAAAGAGATTAAGCACCCTGAATTTCCCGTTGTGG 812234 30 100.0 35 .............................. TACGCCTGTCTTTCGACTTCTTCTTTCTCAACCAC 812299 30 100.0 35 .............................. TAAACGCATATGCTAAAAGAAGTAATGCCCTTTCC 812364 30 100.0 38 .............................. AGATTATAAAAAGCAAAATCAAAATTATCATTAAAAAT 812432 30 100.0 34 .............................. AATTTTTTACCATATGTAAAGTTATTTTTAAAAA 812496 30 100.0 34 .............................. TCGTTTTAAGTATGTTACACTTCCTTCTGGTAAA 812560 30 100.0 36 .............................. TTTGCATTTAGTGCTTTTTGTTAATACTAAAAATAC 812626 30 100.0 34 .............................. TTTGAAGAGAGCTACGAACAAATTTCTTCCCTAT 812690 30 100.0 34 .............................. GTTTTAAGCGTTTCATTTTCTTTTTGCTTATTTA 812754 30 100.0 37 .............................. AATAACTTGGATTCCGAACGGTAATTTAGATTGTCTA 812821 30 100.0 36 .............................. TCTTTAGCCAAAAAATTATGACACTCATCTAGAACA 812887 30 100.0 36 .............................. ATAGCCCTTAGTGCGTCATTTTCATACTCATTTTTT 812953 30 100.0 36 .............................. AACACGGCAAGGGATTTGCCGCTATTTGTGTATTTA 813019 30 100.0 36 .............................. AAAGAAATTGTAAGAGAAAAAATTGAGGAGGTGCTA 813085 30 96.7 0 ..................T........... | ========== ====== ====== ====== ============================== ====================================== ================== 29 30 99.9 36 ATAACACCGATACATTTGGAGTATTGAAAT # Left flank : CCTGCTGGAAAATAGAGAGTTTGTTCCTTTTTTGATTAAGGAGAAAAAATGAAAAAAGATTATAAGATTAATTATGTGTTTTTGATGTATGACATTGCTGATGAAGAGAGTGAAGCTGGAAAAAGAAGAGTAAACAAAGTTTTTAAAATCTGTAAAAAATATCTAACTCATCATCAAAAATCGGTTTTTAGAGGTGAAATCACTCCAAGCCGCCTTTTAAAACTACAAAAAGAATTAAAAGATGTAATAGATGAAGAACTGGATTTTATTACAATTATAAAACTTAAAAACAAAGAAAGCTTTTTGGAAGATACAATTGGCAAAAAAGAAAACGATATGTTTATTTAATTTTCCAACCTCTTTTTATTGACAATCTTTTAAAAACTTCGATATAATCGTAAAAATAAAAATTTTTTTGACAATTTAATGTTATAATTGTTTTGGTTGGAAAAAGGCGATAAAATCGCATTTTATATATAAAAAATCCCAAAATTCAATGT # Right flank : TGTTAGAGTCAGAGAGCTATTTCTAAAAAAATAGACTTTATTATTTTTCTTTGTTACTATTGTCAAATAAAATATATTTTAGGGATTTTTATGAAAGATATTGTAAAATTTATAGACGGGGAAATTGAGATTGAGACAAAAGTGGAAAACGAAACGGTATGGATTACGCAAAAGCAGATGTGTGAGCTTTTTGGAACTGCAAAATCTACTATTAGCGAACACTTAAAAAACATTTTTGAAAGTGGTGAATTAAACAGAGAATCAACTGTTCGGAAATTCCGAACAGTTAAAATGGAAGGAAACAGAAAAGTTTCAAGAAATATTGAATATTACAATCTTGACGTAATAATCTCGGTGGGATACAGGGTAAACAGTAAAAAAGCAACGAAATTCAGACAATGGGCTACGAAAATTTTGAAAGATTATATTTTAAAAGGATATGCTCTAAATCAAAAAAGGTTGGAGCAAAACTTTAATGAATTTAAGCAGGAAATTGAGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAACACCGATACATTTGGAGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 4 1329545-1329108 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027432.2 Caminibacter pacificus strain TB6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 1329544 37 100.0 43 ..................................... TAAATAAAATATAGACAGGTTTATCGTTATAGAATTATCAAGA 1329464 37 100.0 42 ..................................... CTTCCTTTACCAAAGAAGCACCTTGAAGATATAACTTTCCTC 1329385 37 100.0 41 ..................................... ACTAAAAGTTATAGATAGCATCATTGCCATAGTAAAATAAG 1329307 37 94.6 46 .........T............G.............. GCTACCAGGACTACTGCCATATAAACAGCTGTAACAATCCCCGCAG 1329224 37 100.0 44 ..................................... GGGAAACCAAGTTCTTCTGCCAGGATTTTTCTATATTTGTTTAT 1329143 36 81.1 0 .........T.....T.....G..C.A.....-...T | ========== ====== ====== ====== ===================================== ============================================== ================== 6 37 96.0 43 ATTTTCTACCTTCTTGGGTAGAAGGTTAATTGGAGAC # Left flank : GAAATATTGAAAATCGTAAATAAAAAAGAAGATAGTGTAAGATTTTATAATATTTCAAAAAACGATATTCTAAAATCTTTTGAAATTTGTAACTATTTAGATATTTTAGACTTTTAGGTTTGCCAACTTTTTTTGATGATTTTATGCACATATGTAAAATTTGGACTTTAAAAGTTGGCAAATGTGCTAAAATTAACTTATTCAAACTTAGGTTTGCGAACTTTTGAAAATTCGTTGTTTTTTGAGCCCGAAATCTCGGACTTAATTTTTTGCTATTTTAGCAAAAGTTGGCAAATGTATGTTTTTGTATGTTTTCCAAAAGAGGTTTGCCAACTTTTTAAGTTTTTTAAAAGCCCGAAATTCAGGCAATTTAAGCAAATTTTAAGCAAAAAGCTAAAGTTGTGGGGGTCAAAATTTAATAGATTTGCCAACTTTTTTGAATCAGTAATACTTCGGACGTTTTAAAATTCTGTTAAAATAACTTAGCCTTGTTTTAGGCT # Right flank : TTGTGATTTACCATTGATGTTTTTTTGTTTTCTATTTTGATTAGTAATTACATTGAAACTAAAAAAACAGTTTTGTATTTTCAAGAATTTCTCCCGTCATTGGAAATGATTGGCTTAGTTGATGAAAGATTTAATTTATTTTTGTGAGTTAAGGAGAAACTTTTTTTAGAGGAATAGATTTTATTTCATTAAGGATAGATTGTCTTGGATTTTTGGGGTCTATGTTTTTTGGGCGGTATTTTTTATCCCAAAGGTTGTGGGCTTTTATCCACTCCTCGCAGCAGTTTAGATTAAGTATGCTGAATGTTTTTAGAGGGTATTTTAGCGCAAGTGCGAAAAGGAATCTATTGGTAACTGTTTTAGGGCATTTTTTTATTTTGATTTCTTTTTTTAATCTGTTGGGAAGGTTTAAGGCCGAGATTACTTTTTCGTGGTTTAGGTGTTTGTAGTAGATGAGGTGATATAAAAAAAAGCTCTCAAGAGGATTGTTTTTATAAAGT # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTCTACCTTCTTGGGTAGAAGGTTAATTGGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.30,-8.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 5 1339747-1340094 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027432.2 Caminibacter pacificus strain TB6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================================== ================== 1339747 31 100.0 49 ............................... GGAGACTAAATAAAATATAGACAGGTTTATCGTTATAGAATTATCAAGA 1339827 31 100.0 41 ............................... GGAAACTTAACGATATTTTGCTTGTTTTGTTAATTTTTCAA 1339899 31 100.0 52 ............................... AGAGACATCTCTTCCATCTCTGTAGTCATCGATATACTCATAATATTTTCTA 1339982 31 93.5 51 ............T..A............... GGAAACGACAAGTAATCCATTTCCACGTTCTCGTAGAGATACCTTGTTACA 1340064 30 83.9 0 ....C..........-.....G..A.A.... | A [1340076] ========== ====== ====== ====== =============================== ==================================================== ================== 5 31 95.5 48 ATTTTCTACCTTCTTGGGTAGAAGGTTAATT # Left flank : TACATTTATTTACCTTATAAGGCATAACGAAAATATAAATCTTCCGTTTCTTCTTTTAAATGATATAAAAGAGGTAAAAAATTTGTTACGTTACAAGTGTCCTTTCTTTCCTTTAGGTTTGCCAACTTTTTTGTGTGATTTTATAAACATATGTAAAAGTTTAAGCCGGAAAAGTTGGCAAATGTGCTAAAATTAACTTATTCAAACTTAGGTTTGCGAACTTTTGAAAATTCGTTGTTTTTTGAGCCCGAAATCTCGGACTTAATTTTTTGCTATTTTAGCAAAAGTTGGCAAATGTATGTTTTTGTATGTTTTCCAAAAGAGGTTTGCCAACTTTTTAAGTTTTTTAAAAGCCCGAAATTCAGGCAATTTAAGCAAATTTTAAGCAAAAAGCTAAAGTTGTGGGGGTCAAAATTTAATAGATTTGCCAACTTTTTTGAATCAGTAATACTTCGGACGTTTTAAAATTCTGTTAAAATAACTTAGCCTTGTTTTAGGCT # Right flank : TAGAAACCCACCGGGATGACCAAGTATTGCACCAATTCCTTCTTCAACTTTTCATATCTTATTTGTTCCTCTTCAAAGTTTTTTTCTTCTTTTCCTTCGTTTTTGATAAAATTCTCATAAAAAGGCCTAAAATGAAATATACTCTTTTAATCGATTGTGATGACAAAAAAGGGCTTGTATATAAAATCAGCAAGGTTTTATACGAAAACGACTTCAATATAGAAACTCAACAGGAATTCGTTGATAAAGAAAACAACAAATTCTTTTTCCGCGCCGTAATTGCCGGAGAGGTTGATAAAGAAAAATTAAAAGAGCAGATTTTAAAAGAAGTGCCTTGTGCGAATATTAGAATTTTCAAAAAGCGCAAAAAAAGACTCTTTTTAATGGCTACAAAAGAAGCTCACGCTCTTGGAGATATTCTTATTAAACAATATAGTGGCGATTTGGACGTAGAGATTATAGGAGTTATCGCAAATAGAGAAAATCTAAGAGATTTAGTG # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:-0.26, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTCTACCTTCTTGGGTAGAAGGTTAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.20,-8.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //