Array 1 1212154-1216110 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP075981.1 Clostridium perfringens strain CPI 18-1b chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1212154 29 100.0 36 ............................. TATAGACAAAATAAAGAACCATATAGATTTTTTATG 1212219 29 100.0 37 ............................. AACTGGAGATATGTCAGAGCAATGTCTTTTTATGCTT 1212285 29 100.0 36 ............................. TTGTTTTTTGCAAGTTCTTCCAAAGCTTTTTTCTGT 1212350 29 100.0 37 ............................. GTAAATTTACATGGTAAACAAGGTTTTATGTTTATTC 1212416 29 100.0 37 ............................. AACATTTTTCCACCTATGACCGTGGGCGTTGTATAGT 1212482 29 100.0 38 ............................. CAAGGATACTAAAAATATAGCGACAGCAATAAAAAATT 1212549 29 100.0 36 ............................. TCAATTTCGGCTGTAAAATTAAGACCAACTCCCATT 1212614 29 100.0 37 ............................. CAAAACAATACCATCTTTTAGCAATTTCTTGTTGACA 1212680 29 100.0 36 ............................. ATGAGTTTAGGTGGTTTAAGTACTTCAACTGGTATT 1212745 29 100.0 37 ............................. TTAATAGTATTAGAAATATCATGACTTTCTTTGTCCT 1212811 29 100.0 36 ............................. ATTTATCAATTTGATGTTTGGGTATCAATAGCGTTT 1212876 29 100.0 36 ............................. AAACCATGACATGGTAAACACATTAAACCTAATTTA 1212941 29 100.0 37 ............................. GTTGTATCAACTCTACTTTCTTTCACTTCATTTAAAA 1213007 29 100.0 38 ............................. GCAGATAAAGCAGCACTATCTGTTAACAAATTGTTTAC 1213074 29 100.0 37 ............................. TCATTAGTTCTAAGCATATACTTTTTAGCCCCTATGG 1213140 29 100.0 35 ............................. AATTATAAGGTAGGTGACAAAGTATGACAATAACT 1213204 29 100.0 37 ............................. ATTAATACTAATAATTATCATGGGAATATTAGTTGGT 1213270 29 100.0 37 ............................. CAAAAAGATAAGAAGAGAAAAGTTTGGGCGTTTGGAT 1213336 29 100.0 38 ............................. CAAAAAGATAAGAAGAGAAAAGTTTGGGCGTTTGGATT 1213403 29 100.0 38 ............................. AGCTTAAACTCTTCAAAACCTTCATTACATAATATCTT 1213470 29 100.0 37 ............................. TCTTTAGAAGTACATAAATAACTTAATTTATCTATCA 1213536 29 100.0 36 ............................. CGTAAAAATGTTAGGAGAGTGAGAAAACATGGCAAG 1213601 29 100.0 37 ............................. TTTCTTGATATTGCAGATTTAGAATTAGAGGAAATTC 1213667 29 100.0 35 ............................. AGAATTTAAGGCGTACTCTTTAAACTCTTTGGGTG 1213731 29 100.0 37 ............................. ACCTTATTATTGAAATTAATTCTATTTATAAGTCCTT 1213797 29 100.0 38 ............................. AGAGAAGTAAATCCATTGAATGGACTAGCATCATAATG 1213864 29 100.0 37 ............................. TATTGTAGTACCATTGTCAAAAATGCCTTTAAGGATA 1213930 29 100.0 36 ............................. TCAACTGTAACATGAGGTTCAAACGTATAACCAGTA 1213995 29 100.0 37 ............................. TCTTTCAATATCTATTAAAATATGATTATCTTCTCTT 1214061 29 100.0 37 ............................. AATATTACGTTATTCGTATTTGTAGCACCTAATCCAA 1214127 29 100.0 37 ............................. AAAGATGCACAAAAGATATTATGTAATGAAGGTTTTG 1214193 29 100.0 36 ............................. ATGTGAGGCAAAAAGCATCAGATAAAAAACACAATA 1214258 29 100.0 37 ............................. AAATAAACCTCACCACATATGAAAAATGAAAAAATCT 1214324 29 100.0 36 ............................. ATTGCATAGCAATATGATTTATTTTTTCTTCTTCAC 1214389 29 100.0 36 ............................. TCTACTGGTTTACTATCAGCACCATCTACTGGCTTA 1214454 29 100.0 36 ............................. ATGTGTAAATGGAGAATCTTCAAATTTAAAACCATA 1214519 29 100.0 36 ............................. TTTCTTTCTATATATTTAACTGCTTCTTTCATATTT 1214584 29 100.0 36 ............................. TCTAAAGAATATTGCCATCCCCTACAAGTAAAGTTA 1214649 29 100.0 36 ............................. ATAGCTTTTTGTATGTACCTTATTATGTCTTTATTA 1214714 29 100.0 36 ............................. TTAATAACTCTATCGGAATCGCTAGGTTTAAATAAG 1214779 29 100.0 36 ............................. TTTGTACATTCTTGTACCATTACACTTCCTCTGTTT 1214844 29 100.0 36 ............................. TAATGGGTATAAATCCAACAAGCATATTACAAGGCG 1214909 29 100.0 36 ............................. AAAGAACTCAAAATATTAACTACAATTGGAGCAAAC 1214974 29 100.0 36 ............................. TACTTAGAGAATGCTTTTTCAAGTACTATAGAGTAT 1215039 29 100.0 37 ............................. TTACAAATCCATTCATCACACTATACCCTCCATAACT 1215105 29 100.0 36 ............................. TCTTTTATAAGGAGGTGGATATTATAAGTGGAAGTG 1215170 29 100.0 36 ............................. AATTTTTTAAGAGTTTCATTAAATTTTTCTCCACTT 1215235 29 100.0 36 ............................. AATGGTAATCAAGCCTTATCAGGATATGAAAATAAG 1215300 29 100.0 36 ............................. ATAGAACCACTAAAGCCAGTTAATAAAGAAGAATCA 1215365 29 100.0 36 ............................. TACTACAAACATAACCTTGCTTAGCACAACGTATTA 1215430 29 100.0 36 ............................. ATCATAGTACCCATTATTCCAATTCCAATTGGAAGT 1215495 29 100.0 36 ............................. GCAACGTATTTCTTACGCCATTCCATGTAAATCTTA 1215560 29 100.0 36 ............................. AAAGTTAAGGGTAACGATCATGGCATATGGAGAAGA 1215625 29 100.0 36 ............................. GATACAAAGATAGTTCTAACATATCTAGAATTTATA 1215690 29 100.0 36 ............................. GAGTTAGCAGAGATTTTAAGTGTAATTTTAAAAAGA 1215755 29 100.0 36 ............................. TAATGTTTTTCCTCCACTTTACTCTTTATAATATTG 1215820 29 100.0 37 ............................. TACTCATTAAGGTAAGCCATTATAGCTATCTTATTTG 1215886 29 96.6 36 ...................A......... GTAGAAGTACCAAATTTAATAAGTATAGAAATATCT 1215951 29 96.6 36 ................A............ ATTTTTTGCTCTTACCCTTGCCTTCCCATTTGAGCG 1216016 29 89.7 37 A......C...........A......... TCATCTGATAAAACTCTTAAAATAATATATTGATTAC 1216082 29 82.8 0 ............T.....T.GG......A | ========== ====== ====== ====== ============================= ====================================== ================== 61 29 99.4 36 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACAAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGAAGATTTTTATTGATACACTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAAGAGAGAATGAGGCTATTACTAGCTTTTAGCATTTTAAAATTTGGG # Right flank : AAAATAAAAAAAGCATCTTAAAAAGATACCTTTAAACTTAGAATTTTTTGTTTCAATAGCAAGTGCACCTAATGCAGATATATTTCCAACAATGCTTTGGATTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTCATATTTAATACTTCCAATATATATGGTAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATAAGTAATTTTAGTTTTATAATAAGAATTAAAAAGTAAAATGGACATGATATCTGTCCATTTTTACTTAATTATTAATAGATACTTATTAAATTAAATTTAGAACTTTGAATCTAATAATCTATGCATTTAGCAGTTTACAGCTAATAGCTCCCTTGAAATTTCCTCAAATCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCTCATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //