Array 1 52038-50545 **** Predicted by CRISPRDetect 2.4 *** >NZ_MYQL01000011.1 Salmonella enterica strain BCW_4834 NODE_11_length_172207_cov_4.14719, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 52037 29 100.0 32 ............................. ATGGCACCGGCGATACCCCAATCGGGATGAAG 51976 29 100.0 32 ............................. GGATACCTGTTCCGGCAACGGATCTTCCTGCG 51915 29 100.0 32 ............................. AGCCGCTGCCTGACGGGGCCATTATTCATATA 51854 29 100.0 32 ............................. TTTCCGGCCAGAACGTCACGGGCAGCAGCCTG 51793 29 100.0 32 ............................. GGCAGGTTAAACCTGAACGTCGCAAGGCAGAA 51732 29 100.0 32 ............................. GAAATTGACCACATCAATAGCGTTAGAAACGA 51671 29 100.0 32 ............................. GGACTGGGTTTTAAGCTGGTGGTGATGTGTGA 51610 29 100.0 32 ............................. GCGGCGTATGAGCGCTGGCGGCAGGAGCAGGA 51549 29 100.0 32 ............................. AATTACTTTCCGATTTCATCGTGTCGTCAATT 51488 29 100.0 32 ............................. ACTATTAGGGTGACAACGCCCACCACAACGTC 51427 29 100.0 32 ............................. ATGAGTGGTACCGCAAGGAGTGCGAGAAAATT 51366 29 96.6 32 ............T................ CGGAGGAGAGTCGGGAACGTTATTCACAAAGG 51305 29 100.0 32 ............................. GTATTACGCGAGTTATCAAAAGAGCTACGCAA 51244 29 100.0 32 ............................. GGTATTGGCTGGGGCGTGGATATTCTGGAAGA 51183 29 100.0 32 ............................. CTGTCACAAACAGCCCTAGCTAAACTTGTTGG 51122 29 100.0 32 ............................. GCGGCGCGACTCCCATCGTATCGGTGGTGGCG 51061 29 100.0 32 ............................. GGCATCAGCGAGTCGACAGTCAGCAGACGTAA 51000 29 100.0 32 ............................. CGGGAACGCAGGTCAGCAATCTCCTGGCGTAG 50939 29 100.0 32 ............................. GTTGCTAAGATCGATAGACTCAATATTATCTT 50878 29 100.0 32 ............................. GATCATTTCTGTACCCGAAACCAGGAATAGTT 50817 29 100.0 32 ............................. CATGATGTTAACATGTATCAAAATAATCCAGA 50756 29 100.0 32 ............................. ATGATTTTCTCCTCAATTACCCGCTATAATAC 50695 29 96.6 32 .............T............... TTTGCGCTCGCTGACGTCAACAGCTTCTACGC 50634 29 96.6 32 ............T................ CTGCCGGTCAGGCTGCTGAAGTTACTGTGGTC 50573 29 86.2 0 ............T............G.TA | ========== ====== ====== ====== ============================= ================================ ================== 25 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTCGCTGCCGGTGAAATTGAACCACCTCAGCCTGCGCCGGATATGTTGCCGCCAGCAATACCTGAGCCGGAATCTCTGGGTGACAGCGGACATCGGGGGCATGGTTAATGAGCATGGTGGTGGTGGTGACTGAAAACGTACCGCCGCGCCTGCGAGGGCGGCTTGCCATATGGTTACTGGAGATTCGTGCGGGGGTTTATGTTGGCGATACATCAAAACGCATTCGGGAGATGATCTGGCAACAGATTACACAACTGGGTGGAGTCGGAAACGTAGTAATGGCCTGGGCAACAAATACGGAGTCAGGTTTTGAGTTCCAGACCTGGGGGGAGAACCGCCGTATTCCGGTAGATTTGGATGGACTCAGATTAGTTTCTTTTCTTCCCGTTGAAAATCAATGAGTTGAACGTTCTTTAATAATAAGAAATTGTTATCTTAATGTTGGTGGATTGTTGGGTGGCAAAAAAGGCTTTCTGGAACAAATATATAGATTTAGT # Right flank : TTTTTACCAGCAGATCAGGATGTCTTTTCCGTCTTCGCCAGCTCTTTTACTAGCGGCAGCATTATCCGTACTACGTCGCGACTACGGCGCTCAATTCGTCCTGGCAGCGCCTTGTCAATATGCTGTTGATTATCAAGCCGTACGTCGTGCCAGCTATTGCCGTTCGGGAAGGAAGCATTTTTCGCGCGTTGCTGGTATCCGTCTTTTTTACCCAGATTCCAGTTTGTCGCCTCAACGGAAAGCACAGAAATTCCCGCTTTATCGAAAACCTCCGCATCATTACAGCAACCCGTTCCTTTGGGGTAGGACGGATTGAGCCCCGGATTGGTGCTGGCGGCGATACCATAACGGCGCGCAATCGCTAATGCCCGATCGCGGGTCAGTGTACGCACCGCTTCCGGCGTATTTTTCCCGCTATTAAAATAGAGCTTGTCGCCAACAATCAGATTATCGAAATTAATGACCAGCAGCGTATTTTTCTTCTCAGCGTCACTCATTCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //