Array 1 45848-46679 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB899416.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00011.11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 45848 33 97.0 34 ................................G AGGTTGAGGGAGTCGCCGACGGAGAGTCCGTCGG 45915 33 100.0 34 ................................. TGCTCTCTCATCTGTTTTCGCTGCCTCATTCCCT 45982 33 97.0 34 ................................G AGGTTGAGGGAGTCGCCGACGGAGAGTCCGTCGG 46049 33 100.0 34 ................................. TGCTCTCTCATCTGTTTTCGCTGCCTCATTCCCT 46116 33 97.0 33 ................................A TGTCGGGGCCGACGGCATCAAGGACTTCTTCGG 46182 33 100.0 33 ................................. GGCCCTAAGAGTTATTAGCCTCCTCTCTTGGGG 46248 33 100.0 34 ................................. ATAATTATAGTAACGACGTATCCTACTCAGTACA 46315 33 100.0 33 ................................. ATAGTATAGGCCCATTGGGCCTATGTGTCAACT 46381 33 97.0 33 ................................A TTGGAAGTCCTTATAAATATGTCCGCCGACGGA 46447 33 97.0 34 ................................G TAGGCTGCTGCGTTGGCTGCGTGGGCTGCGTAGG 46514 33 97.0 34 ................................A GCGCACACGATGTATACCTCAACAATTACGCCAT 46581 33 100.0 33 ................................. CAGGCTTATTACTCGACCGCGGAACAGCAAACC 46647 33 97.0 0 ................................A | ========== ====== ====== ====== ================================= ================================== ================== 13 33 98.4 34 GTCGCACCCCTCGCGGGTGCGTGGATTGAAACT # Left flank : GCTATCCGTCCTTTTTCTGGAGGTAAAAAGTATGATGGTATTGGTCAGCTATGATGTTGCCGTCACCACCCCAGGTGGTACCAGACGCCTTCGTAAGGTCGCTAAGGCATGCCTCAATTATGGGCAGAGGGTACAGCACTCGGTATTTGAATGCGTGATTGATCCTGCCCAATGGGTTAAACTCAAGCACCAACTCGAGACGATCGTTGACCCTCAGGAGGACAGCCTTCGCTACTATTTTCTCGGATCAAATTACAAGCGTCGGGTTGAGCATTTCGGTGCGAAACCCTCCCTTGATGTCGATGGACCGGTTATCGTTTGATGCTGCGAACCAAAATGATACATAAAAACCCCGACCTTTCGCATCGTTGATAATTCTTTATATGGTAATGATCTTTGAAAATATAGAGAAGGAAGTGTTCCTTTTTTTGCGATTATGCATACTGTTCGCAGATATGGCCTCTTAACTTTTTCCCCTGAAAAAAGATATACTGCAGCCT # Right flank : AAGAATTGGTATAATGGCAATAAGGAAACCGACGCGTCGCACCCCTCGCGGGTGCGTGGATTGAAACGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGTGCGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 48050-49876 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB899416.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00011.11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 48050 33 100.0 32 ................................. TTGATATACTCGCCTCTGAGCTCTTCCCATTG 48115 33 97.0 34 ................................A CTTTTGAAGGAGAAAAACAGCCCGCCGTATTCCA 48182 33 97.0 32 ................................T GTCCGAAGGGTCGGAGAGGCCTCCGAGGTATC 48247 33 97.0 34 ................................T CAAGATGAGGTAAATAGCTTTCAGAAAGAAGCGG 48314 33 100.0 33 ................................. CCATTATTGTAATAATAATTGCTGTATGAGCTT 48380 33 97.0 34 ................................T ATGCTTAATCCTAATACCTTACGAGAGGGATTAG 48447 33 97.0 35 ................................G TGAAGTCCCCAGCCACAGCGAGGAAGGAATCCTTG 48515 33 97.0 34 ................................A CTCAGTGTGAGCTCAAAAGGTCCAGTGACACGTT 48582 33 100.0 34 ................................. CCGTCTGGGGTTGTCCATTGGCGGTATGATCTAT 48649 33 97.0 33 ................................A AGGAAACGATCGAACGACTATCGAGAGCCAGGA 48715 33 100.0 33 ................................. GTGTAATCCGCTCTGACCTCCACCATCCAACGG 48781 33 100.0 33 ................................. CATAGCCTTGAGTAGGTCGTTAAAGCCGTCGTG 48847 33 97.0 35 ................................T ACTATATGGCAAACGAATAATAATCCTATCTTTAA 48915 33 100.0 34 ................................. CATCTCGGCAGCATCTGGAAGGCATCAGTCGGGA 48982 33 97.0 33 ................................A TCTGCCACGGCAATAAGTCCCTTGTCTACGGCC 49048 33 97.0 33 ................................A TCTGCTTGTATGCCGACAGCTCGTGTCATGTTC 49114 33 100.0 34 ................................. GCACCTAAAAGGACTTGGCTCGCTATGACGCCAA 49181 33 97.0 35 ................................A ATGCATCCTCTGGCCATGAAGTCGACATAGTAGCT 49249 33 100.0 34 ................................. CAATATTGTCGGGGAATCCATCAACCTCGGTGAT 49316 33 97.0 33 ................................G ACTCCCTGCTTCGTGGAGATAAGAAAAGCAGGG 49382 33 97.0 33 ................................A CTCGGGGTAATCTCTGAAGGGGCCCAGTCATAC 49448 33 97.0 33 ................................G TGACTGAAGAGAACAGAGCGTTTGCAAGTTCGG 49514 33 97.0 32 ................................T TAACCGTATCACGGAGTATGTTGGCCCTGGTG 49579 33 97.0 33 ................................T TGGGATCGAATGTCGTCATCCGCTTTTTCTTCA 49645 33 97.0 33 ................................A ACCTCCACACACAAACAAACATAGCATCTGCGA 49711 33 97.0 33 ................................T GGTAGTGCTATTGTTACTAATCCGTTTACTGGT 49777 33 100.0 34 ................................. TATAGGCGGCCTCTGCCGTTTCTATGATCTCGAT 49844 33 87.9 0 ........................GG.....TA | ========== ====== ====== ====== ================================= =================================== ================== 28 33 97.6 33 GTCGCACCCCTCGCGGGTGCGTGGATTGAAACC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTCGCACCCCTCGCGGGTGCGTGGATTGAAACATGCGGGCCGGGAAGAACAAGGCCATGAGGGAGA # Right flank : AAAACTGGAACTGAAAGAGGATGTACGCCTTACATCACTTCCTCGAGTTGAGGAAGATGATAAGAGAATTGGGAAGGAGAATTAAACGGCATCGGGACAGTGAGAGCTCACTTAGAAGATTACAGCAATTAATATTTCCCCATCATCGTTGCATGATGATTGTCTGAGAACTGTACTGGATGCGTTGTATGACTCGGTATAACTGAGCTCTGTTATCATGGAAATACTTAGGCGATCTTTGAATTGATTACTCTTTGTCTACCTTGAGTTCCACCACTATCGGTTTCAGGAGCCTCCACTATGAAGTGAGGGAAGAAGATGGTCTTGATAGCGTTACCATCACCAGGAAGGCGGGTACGGGGAAGTTGATAGAAGCGAGAAAAGTGCTTGACGGAGTTGATATTGAATCTATAACTCCTTGTCTAAACTGGAATTATTGCTACATTTGCCGGGAGAGCGAATATGGCAATGTCAAACAGTACACGTACGAGAAAGAGTTC # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGTGCGTGGATTGAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,1.01 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //