Array 1 95978-97662 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVFO01000020.1 Streptococcus agalactiae strain S10-201 S10-201_Contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 95978 36 100.0 30 .................................... TCAAACAGAGCCTAGAAAGCGTTATGTGGA 96044 36 100.0 30 .................................... ATCGGCAAGTGAATCTGATTATGCAACTAA 96110 36 100.0 30 .................................... CTTCTTCCAATTCTTTAATGGCCCTTAGAT 96176 36 100.0 30 .................................... TAGTGTTAAAAATTCGTCCATTATTAATAT 96242 36 100.0 30 .................................... TAATATATCCAAAAGCCCCGCCTGCCAGCT 96308 36 100.0 30 .................................... TGTCAATTTTCGTGTAAAGGAGGTAACTTT 96374 36 100.0 30 .................................... CATTGCGCTTGCAACTGACCATGACTCACA 96440 36 100.0 30 .................................... CGGACGATGAAAACTTGTATAAAGCCGTTT 96506 36 100.0 30 .................................... TTATGTAACCAACTGTCGAATCACCCCATT 96572 36 100.0 30 .................................... GTCGTCACCTTGCCTTCTAACTTACACCAT 96638 36 100.0 30 .................................... TTAAAGTTCATTACTTTCGAAAACTCTTTA 96704 36 100.0 30 .................................... AAGAACAATTAACGGTAAAATCACAATTGT 96770 36 100.0 30 .................................... AACATTTAAAGTTATATTATAACACCCATG 96836 36 100.0 30 .................................... ACTATAAGTATTTTGTTTTATCCCTAGTAG 96902 36 100.0 30 .................................... TATCTACGAGACGAAAACAATTGCCAATGT 96968 36 100.0 30 .................................... AGTTATCAATGCTATATGGTTTCTCATCTT 97034 36 100.0 30 .................................... AACTGTGTGATACTTTTCGTTTTTTTCTTT 97100 36 100.0 30 .................................... TTTTATAAGTGATAGAGTGTGCAACACCGT 97166 36 100.0 30 .................................... TTAAAAGATTTAAACTATCAAGCGTCAATT 97232 36 100.0 30 .................................... TTCTAAATGCTGGTGACTGCTTTGCATAAA 97298 36 100.0 30 .................................... TATTTCATCATAGAAAATCCTGCTAGTGGT 97364 36 100.0 30 .................................... TCCTTTTTTAGATAATGTGCGATCACGGAC 97430 36 100.0 29 .................................... TTTTACCAATGCTTCCATATCGCTTATAT 97495 36 100.0 30 .................................... ATTACTTTCAAGATGTCTATGACTATATGC 97561 36 100.0 30 .................................... ACCCCAAAGTTATCAAAGAAGATGACCATA 97627 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGCCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //