Array 1 1802-539 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBFB01000016.1 Marinitoga sp. 1154 Ma_1154_contig_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 1801 36 100.0 41 .................................... AATCCCATTTCTACTGCTGCTTCTAACAAGAAATCTGTTGT 1724 36 100.0 40 .................................... TCCCTTTAAATCTGACATTTCTATTCACTCCCGAAAGTAT 1648 36 100.0 41 .................................... CGTTTTGCCTAAATATTCTCCTGCTTTTAGTCTTCTAAATA 1571 36 100.0 42 .................................... TGAGTTTATTGCTACTATTTTGTTAGTATTCTTGTAACAATC 1493 36 100.0 40 .................................... TCATACATTAAAATCGCCTCCTATTTGTTTTCATCTCTTT 1417 36 100.0 41 .................................... TACAATATTGAATATATTGTATGGTCAGTAATTACTAAGCC 1340 36 100.0 40 .................................... AGATAAAATTGCTACTGAAAAGCATTTCATCATAATTTTT 1264 36 100.0 41 .................................... TCATCATGTGTAAGATCACTATTAATAACAGACTCTAATAT 1187 36 100.0 41 .................................... CTTCATTTGATTCTATTTTGTTTTTCTTCATATAATATGCA 1110 36 100.0 41 .................................... ATTTCTGCCCTAATAGAGGCCAGAGTGAGAGAATCTTGGTT 1033 36 100.0 40 .................................... TCATTTGAATTATGTTAATCTCTTTTAAATCATTATAAAT 957 36 100.0 41 .................................... TCCCCTTGAATTATCAGGGGATTCATTTATTTCAAATTCTA 880 36 100.0 40 .................................... AAACTTCATTTTATCTCCTCCTTTATTTTTATATTTCAAA 804 36 100.0 41 .................................... CTATTGCATCTTGGCAGATGTTCATTAAAACTGGATACTCA 727 36 100.0 41 .................................... GCATGTCCAATTAAATTCGGAACTTCTCCGTTTTTGCATAA 650 36 100.0 40 .................................... TTTCGATCAAAGTGTTGGAAAAAATAATTTTTCCATCAAG 574 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ========================================== ================== 17 36 99.8 41 CTCTGAAAGAAACTACTCTCTGAAAGAGATAGAAAC # Left flank : GAGTTGGAACTAGACCGGTGACTTTACCATTATTAAAATAAAGTAATTATATTATTTATGGTTCTAAATTGTAAAAATATATGAAACTCTTTATTTGAAAGTTTTTTAACGAACAAGAAGACTTGTTAACAAAAAAGCAAGATTTAAGAAAAAATAATTTAATAATATTACAACTTCTAAAAATATCTTAAATAAAGATTTTGATATTAAAAATCGCGCGGAAAATATTAACGAAAGATTATAACGTTTAAAACAGGCTTGACAAGAGAAAAAGAGAAGAGTATAATTATATTGAAAAACATTCCGGACCTATGTTAAAAATTGCAAAATCGCGCAAAACCGCATGAATAAAGGGAAGTTAAAAAACAGGTCCGGAGGTTGATTATAAGCGGTTTTTAGAAGATTTTTTACAAAAAACAAAGAAAAAATTGAAAATAAAAAACAGGTCCGGAAAAACGCCTTCTAAAAACGGCTAATAATAACTATTTTAGAGACCAAGT # Right flank : ACAAATGATTTTCGATTAAATTCTGTAAATATTTGGAAGGAATATGTTATAATATGAATGAAAAATAAAAATGAAAGTGGAGATGATGAAAATGAAAAAATTACCAATAGGAGTACAGGATTATAAAAAACTAATAATAGAAAATTATATATATATAGATAAAACAAAGTATATATTAGAATTAGCAAATTCTGGAGTACCAACCTTTCTCTCAAGACCAAGGAGATTTGGAAAAAGTTTAACAGTATCAACATTATATTATCTATTCAAAGGAGAAAAAGAATTATTTAAAGATACATATATATATGACAAATGGGAATTTAAAGAATATCCTGTAATAAAACTCGATATGTCAGATAATACATTAACAACATATGATGAATTTATAGATTCACTTAATGAAAGAATTGAAGAATTATATAGAGAATATGATATTTCACCAATAAAAAATAATTTACCAACAAAATTTGGACATTTAATAACAGAATTAAGTAAAAAAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTGAAAGAAACTACTCTCTGAAAGAGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.40,-3.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 26956-25620 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBFB01000016.1 Marinitoga sp. 1154 Ma_1154_contig_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 26955 36 100.0 40 .................................... AAAAATAATATTTTTTTGAAATTATTTTCTTTTTTAATTG 26879 36 100.0 41 .................................... CAGTAAAAAAAATCTGAAATTAAATGTATTTGATTGTCTAA 26802 36 100.0 41 .................................... TTTAATTCTTTTTTGTTCCAATAAACTTTCTAACCAATAAA 26725 36 100.0 39 .................................... ATGTTTTTTCTAACCTGTTTGTTGAATTTGTAACTTCTC 26650 36 100.0 43 .................................... TGAATAGCTGTTAATTTAACTTTTTTTATTAATTCTGGTGGTA 26571 36 100.0 43 .................................... TGAATAGCTGTTAATTTAACTTTTTTTATTAATTCTGGTGGTA 26492 36 100.0 37 .................................... TCAAGATCATTGTATTTTTGAAGATCGATTAATATAA 26419 36 100.0 40 .................................... TTCTTTAAGTTCAGCTTTTGGTATAACAAAGAATTGTTTC 26343 36 97.2 38 ..............A..................... TACTCATTCCAGTATTGGTAATAGCTGTTGTCTGCTTT 26269 36 97.2 42 ..............A..................... TCTAACGCTACATATTCCTTCATTTCTTCCTCTGATGATGGT 26191 36 97.2 41 ..............A..................... CTTAATGCTTCTTTCGGTTTAATTATCTTTGTTATCTCATA 26114 36 94.4 35 ...T..........A..................... TTTTCTGCTTCTTCATCTTTTAATAAATATTTTCT 26043 36 94.4 42 ...T..........A..................... TTTTAAATCTAAGAAATCTTTTAATATAATATCTCTTTCTTT 25965 36 97.2 41 ..............A..................... GATCTTCTTCCATGAGTTTCGTAACCTATATCTGCATATAG 25888 36 97.2 43 ..............A..................... TCCTCCACAGTCGTTCCGAGTGCTTTGGCTATTTTTTTTAGTG 25809 36 97.2 41 ..............A..................... TAAAACTTTTTTGTTGGGTTACCGAATTTATTTAAATCTGT 25732 36 97.2 41 ..............A..................... AATTGACCTGTAATCGTTAATAATAACTTCATCCCACTGAG 25655 36 91.7 0 .............CA....................A | ========== ====== ====== ====== ==================================== =========================================== ================== 18 36 97.8 41 CTCGGAAAGAAACTGCTCTCTGAAAGAGATAGAAAC # Left flank : AAAAAATATTCAAAATATAATACAGATTTAAAATATTAGATTTTTAGAAAATAAAAATTATACTAATGTATAGATTTTGATTAATAATCTATTAAATAAATTATAAATAAACCTTTTAAAGTATTATAAAAATAAAAATAACAAAAAATAAATATAACTGAAATAAAGTCTAAAACTCCCAAATGGTTATAAATAAATGGAAATAATTCAAAAAGGTCCGGAAGTGCTTAAAAAAATGAAACAAAGTTTAAAATAGGCTTGACAAAAGAAAAAGAGAAGAGTATAATTATATTGAAAAATGTTCCGGACCTATGTTAAAAAATGCAAAATCTCGCAAAACCGCATGAATAGAGGAAAGTTAAAAAACAGGTTCGGAGGTTGATTATAAGCGTTTTTTAGAAGATTTTTTACAAAAAACAAAGAAAAAATTGAAAATAAAAAATAGGTCCGGAAAAACGGTCTCTAAAAACTGCTAATAATAACTATTCTGGAGACCAAGT # Right flank : TGATACAAAACTAAAGACCCTTTTTATGTTTTTACACACAAGTATTAGAAGTTACTTTAGAATATTCTCATGAGAGGTGACATTATGGAAAAAATAATCTTTAGATGCGAGATAATAACTCCAATGTTTTGCTATGGGGCACATGATAAAAAAAGAGAAATGCCAGAATTAAGACCACCTTCAATAAAAGGAGTGATTCGTTTTTGGTGGAGGGCAATAAATGGACATATGTCAATTAATGACTTACGAAAAAAAGAAGCTGATATTTTTGGAGGAAGTATTGAAAATATAAAAAAGAGTAAAATTAGTATAACTATTTATCCAAAAGGAATAAAAAAATCTAAAGTAGATCCTGTTCCGCATAAAGGAAAATTTAAAAAATGCGCTTTAAATTATGGAACTAAATTTGATATTGTGTTTTCACTAAAAAAAAGAATACATATTGATAAAAAAATAATAGATTTAGAATATGTGAAAAAACTTTTTATACTTGTGAGTAT # Questionable array : NO Score: 2.84 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGGAAAGAAACTGCTCTCTGAAAGAGATAGAAAC # Alternate repeat : CTCGGAAAGAAACTACTCTCTGAAAGAGATAGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.40,-3.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 80795-78687 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBFB01000005.1 Marinitoga sp. 1154 Ma_1154_contig_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 80794 30 100.0 36 .............................. GTGTTTGCCTATATTGGATATGTTAAAATTTGATGA 80728 30 100.0 35 .............................. CAAGAATTATAGTGTATCTTTATTAATTGAAGAAA 80663 30 100.0 37 .............................. TATACAACAAGTTATGCAAGAATAAAACTTTTTGAAG 80596 30 100.0 39 .............................. TTTGAATTTTCTGTGAATACACCAGCTACAATAATCTTA 80527 30 100.0 37 .............................. ATAGGAATGAGACGTCCAGGAATAATGCCGCATAAAC 80460 30 100.0 38 .............................. ATTATTTTTTTTGCTAATAAATCATCAAATATTTTTTT 80392 30 100.0 38 .............................. GTGGAAGTGGATTTACTGAACCAACCCCCACTTCTTAC 80324 30 100.0 37 .............................. GAATATACTTGTCTTCCAATACTTAATATTTTTACAC 80257 30 100.0 37 .............................. ATCAACACTAAGCGAAATTGAAAATAATAAATATTTA 80190 30 100.0 37 .............................. ATTTTTTTTACGATATAATCAGCATATTCTTTTGCTT 80123 30 100.0 36 .............................. CTTCAAATTGTGCTACAGTCATATAACTAACTGTTT 80057 30 100.0 36 .............................. TTTTAATAGTCTTTGGTTTTATAGACTTTTTTATCT 79991 30 100.0 37 .............................. TAAAAAAGGAAATGACTGATTGGTTATTTTCTGATGA 79924 30 100.0 38 .............................. ATTTGCAGTTTTGTTATTAGCCTTGTTGTTAGGGTATA 79856 30 100.0 36 .............................. AAGTTTTAGAAGGAGTTACTACAGGAGAATAGTTTG 79790 30 100.0 35 .............................. AATTAATAATAGACATTTAAAATCATTCTTCATTC 79725 30 100.0 36 .............................. AAAACTCCTGCATATCCAAATAGTTCGGTGTTTAAC 79659 30 100.0 39 .............................. TCCAGAATGTGGGACAATAGCTTTTGCAACAGATACTAA 79590 30 100.0 37 .............................. TAATAACATTACATTATCTGATACAAACAAATTAACA 79523 30 100.0 38 .............................. TCTATTGGAAATGTATTAACTTATCCAATAATTTCTGT 79455 30 100.0 38 .............................. CAAGTTTTTACTAGTGATGAATTAGAGAAGTGGTAACT 79387 30 100.0 39 .............................. ATATTGGATCAAAAACAGGACCTAAACTTATTTGACTGC 79318 30 100.0 36 .............................. ACTGTCCCGTCAAGTAGAACATAGAGAAAATAAACG 79252 30 100.0 37 .............................. AATGGTCATGAGAATTATCCAGGACAAATAATTTTTT 79185 30 100.0 36 .............................. AACAAAGGCACAAACGCATTACCACCTTTAGAAAAC 79119 30 83.3 38 G...T..TC........A............ ATTTTTTTAATTGGAGATTTGCTTTCTAACTTATAATC 79051 30 83.3 36 G...T..TC........A............ AATCATATAATTCAGTATCTAATTCATGAAATAAAT 78985 30 83.3 37 G...T..TC........A............ ATAAAAAATGTAAATTCAAGTACTTTGAAAAATTATA 78918 30 83.3 36 G...T..TC........A............ CTGGGTATTTTCCCATCTTCCAACTTTTCAATATAG 78852 30 100.0 37 .............................. TCCTGAGTATTTGGAGTATTTAAGATATGGAGAGTTG 78785 30 100.0 38 .............................. ATAAAAATGTTTGTTAATATACTGTCTGTATCTGTGTA 78717 30 83.3 0 ..................T.T.T...T..G | C [78689] ========== ====== ====== ====== ============================== ======================================= ================== 32 30 97.4 37 CTTTCTACAGTACCTATGAGGAATTGAAAC # Left flank : GAAATTAGAATTATATAAACTTGAAAAGCATTTAATTGGAGAAGATGAATATAAACCTTTTGTAATGGAGTGGTGAAAATGTTTGTGATATTATACTATGATGCAAATGAAAAAAGGGTATCAAAGTTTTTAAAAATATGTCGAAAATATTTAACGTGGGTTCAGAATTCAGTGTTTGAAGGGGAAATTACAAAGGCAAAATTAGAAAAATTAAAATATGAATTAAAAATAAAAGTTAAAGATAATGATTCTATAATAATATACGAATTCAGAAGTATGAATTATAGTAAAAGAGAAGTTATAGGTATAGATAAAAAGGAAAATAATAAATTTATATAAGAATCTGTCGATATGGAATAGTAATTATAATGTAGAAGATAGACAGAAAAATTTCTTTCTTTTTTGTAAAAAAAACAATGATAATTAGAAAATTAAATAAAAAATATGATATAATACTTTTATAAAAAATATATTTAGTCAAAAGATTATAGAAAAATTAC # Right flank : TGAACGGTGGACGTGATTACAATTGAAAAATGGTTCTTTCTAAAATTACTTGAAGATTTTTACTAAACTCTTTAGTATTACACTATTTAAATCAAAAAGATTTATTATTGCTAGATATTTATTATAATTCAATCGATATATGTTATATTCGTTTTTTTATCAAGAAAAATCAGAAAGACCCTGAAGTTATAAATAATTACATTAATTAAATGCAACAGATAGTTTTATTTTGGATCACAAACAAACTTTCAAAGAGTTTTTATCAGAAATAATTCAAGAATTATATAATGAAGGACAAATTAAATTTGCATAAAAAATAATGGGGAGATTTTCTCCCCATTTTATTTTACCAATGTACTATTTAAAAATTCTTCTATGTTTTTTTGAGTAATTCTATATGTTTTTCCAACTCGGGAAGCTCTAATTTTTCCTGTTCTAATGTATCTTCTTACAGTATCAGAATTTACTTTTAATATTTTAGCAACTTCAGCGGGAGTGTA # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCTACAGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //