Array 1 1146356-1147243 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009687.1 Clostridium aceticum strain DSM 1496 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1146356 30 100.0 36 .............................. TTTATGTAACGTGTTTTCATTACTATAGATGTTGAG 1146422 30 100.0 37 .............................. AGTAGTTTATTACCTAGTTCAGCAGCTCTTTCTCCTG 1146489 30 100.0 37 .............................. TCTTGAAAAGGATTATTTTAAAAAGGAATTTTAAAAA 1146556 30 100.0 35 .............................. ACTCAATTGTTCTTTCTGCTCTATCTCTTTCTTCC 1146621 30 100.0 35 .............................. TCCATTGCCCACTTTCTAGCGTTCACCGCCCACTG 1146686 30 100.0 35 .............................. GCCGCATCGGTCATTTACTTTCTATTTCTACATAC 1146751 30 100.0 36 .............................. ACGAATTGTCCTAAGATAACAGGCTCACCTTTAACG 1146817 30 96.7 37 ..............C............... ATTTTAGTTCATATGCTACTCCCGCAGAAAGTTATTG 1146884 30 100.0 35 .............................. CATCAAAAATCCTTTTCTTAAAGCCATTTTTATTG 1146949 30 100.0 37 .............................. TTATTCTGTCAATTGGAATATCTTCTTTCTTTTTCTG 1147016 30 100.0 37 .............................. ACCACTCAAATAAATACTCATCGGATTTTGCATAGAC 1147083 30 96.7 34 ......................G....... TGTTCTATATGTTCTAGTGGACTTGAGTTGCTTA 1147147 30 96.7 37 ............T................. TGCTTTTAATCCTGCCAATGTTAGTCATCCTACTATT 1147214 30 90.0 0 .....................A......TA | ========== ====== ====== ====== ============================== ===================================== ================== 14 30 98.6 36 ATTTAGAAAATACCTATAAGGGATTGAAAC # Left flank : GTGGTAAAAAATGTTTGTGATATTAGTCTATGATATAAACATAAAACGTGTTGGAAAAGTACTGAAAACATCCAGAAAATATTTAAATTGGGTACAAAACTCTGTACTAGAAGGAGATATTACAGAAGCAAACTTTGTCAAACTCAAGCATGAGCTGTTAAGTAAAATAAATAAAGAGGAGGATTCCATACTTTTTTATATATTTAGGTCTAAAACCTATTCTAAAAGAGAAGAATATGGACTTAAGAAAGGAGGGGAAGATATTTTTTTGTAAATTTAAAAGTCTGATTTAGACATAAATTTTGAGAGATACATGAAAAATTGTCGTCAACCTCTAATCGGGTAAAAAACTCGGGAGAACGACGACAATTTTATTTTTGTAAAAGATATTGATATTTAAATAGGTTAGGATCAAACACCTATAAAAAATAAGAAGTTGAGTAATTAAGTTAAATTTTGACAATTTTTAGCAAACATGATAAAATCAATATGTTTAATGG # Right flank : AGAACATCAAAAAGTAATATGATACAATAGAAAAGTGCAAGATATAGTTGATATAATTATTATAACAAGACGCTTCAAGAGGTGAAGGCAAATGAATGAAAAAAGCTTAAGAGTACTAGAATATACAAAAATCATTGAAAAATTGATTGAGGGGTGTGCTTCTTCTTTAGGTAAGGATTTAGCCAAGAACTTAAAACCCTTTAATCAACTTGAAAAAGTACAACAGCTACAGAAGGAGACCAGTGAAGCACAAAGTATTTTGATAAAAAGAGGCAATGTTCCGCTAGGGGGGATACATGATATTCTACACCTTGTTCGTAGAACAGAGATTGGCTCTTACCTGGATCCAGGACAACTTTTATATTTAAGAGATACATTAGCTGTTGCCCGAAAACTAAAACAATTTTTAAAAGAAGATGATAGACAAGAGGCAGAGTACCCTATTATCAGGGGTTTAATACAGAGCCTGAATACTGTCAAGGAAATAGAAGAGAAGATCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAGAAAATACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 2310837-2305563 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009687.1 Clostridium aceticum strain DSM 1496 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2310836 30 100.0 37 .............................. CATCCTTAAGTTTTACCTTATGCTCTTCAGTGGTGTG 2310769 30 100.0 36 .............................. ATGGTAGAGGTAATTCTAGAAACTATAGAATAATAC 2310703 30 100.0 38 .............................. TTATTAACATAATCATTCACTGCATTTACGATCGTATG 2310635 30 100.0 37 .............................. ATAAGTAAGGACTTAATTATCCAGGACAACATGAACG 2310568 30 100.0 36 .............................. CTTGTAACGAGAACAGCATATAAAGGTGGATTATCC 2310502 30 100.0 37 .............................. CCTACTAGATTAGCTAGGTATTGTTGCGAAAAATTAA 2310435 30 100.0 37 .............................. GCTATTATACCTGCTATAACACCTATAGCTTTAATTA 2310368 30 100.0 36 .............................. GAATATAGCAGAGTATTTTTTAGTATCATTAGATTA 2310302 30 100.0 36 .............................. AAATCTATATTCCCCCATGCTTGAGCTATGGCTTCA 2310236 30 100.0 36 .............................. TTGTTCAATAGATGTGTTGCAAAAGTATGGCGTATC 2310170 30 100.0 37 .............................. AACTATAACAGGACTCATGACTGGGGACTGGGACATG 2310103 30 100.0 36 .............................. CCTTTCGACCGTTATACGCTAATACAGGACGTTTAC 2310037 30 100.0 36 .............................. TTTAACATCCCTCCTAACTTAACGCTTCTACTAAAG 2309971 30 100.0 35 .............................. CTTTTTAATTCCTGAGAGAATGCCGGCATAGGTGG 2309906 30 100.0 36 .............................. AGATAAAGAAAAAGCATGGAAAATTTTTGAATATTT 2309840 30 100.0 36 .............................. AGGTTAAAAGCTTGCCCAAACCGGGGTAAAAAATAT 2309774 30 100.0 37 .............................. GTAGGGAATATACATGTAAAAGCAAAAGATAATGATG 2309707 30 100.0 36 .............................. GCAGGAGGCTCTACAGCTGCCGCAGGGACTACAGTA 2309641 30 100.0 37 .............................. ATAAAAAGCGGGTTAATACTGCCGTAGTAGTTTTACC 2309574 30 100.0 35 .............................. TCTGCTCTCCACAGTCCATGCATGTGTAATGCTGA 2309509 30 100.0 37 .............................. ATACATCAAAGGTGTAATCATATGGCCTGTAGATGCA 2309442 30 100.0 38 .............................. ACTAGAATTGTTAGATATTGTTGTTCCGAATTAAAAGA 2309374 30 100.0 35 .............................. CCGCTAAAGGCTAAATAATAACCTTCTGGTGGTTC 2309309 30 100.0 37 .............................. AAAGGAAAGTTTAAACTCTCCTACGGGCATTTCAATG 2309242 30 100.0 39 .............................. AGGTTCTTTTCTAACTCTCTTTTTTAGGACTTCTGTACA 2309173 30 100.0 36 .............................. GCGTTAATGGGTTTGTTGTTGCAAGTTAGAAAAGAA 2309107 30 100.0 35 .............................. AATTTTTACTAGAAAACCAATTAATTCTTGTTCAA 2309042 30 100.0 35 .............................. TTGCGTATTATCATCGGCAAGCCATATTTGTTGTG 2308977 30 100.0 36 .............................. GGAATAACAGGCCTGGGGGATGGTAAGGCACCCTGT 2308911 30 100.0 36 .............................. CAGTATCGACCAAATGGGCGCAGCTGCTAACGCCCT 2308845 30 100.0 36 .............................. CTTGGCACTGTAAAACTTTGTGCTTCTCCTGTGTAG 2308779 30 100.0 37 .............................. GTAGATGAAATTGATTTTGAAAGAAGTAAACTCCTTG 2308712 30 100.0 37 .............................. TGTGGTAGAGCGGATATATGAAGTATTGCCTTGGATA 2308645 30 100.0 36 .............................. TTCTCTGATCCTAGACTTTGATATTTCTATTTTGGC 2308579 30 100.0 36 .............................. GCGTCACTATTGGAGTTTCTTCTTTAGGTTTTTCTG 2308513 30 100.0 37 .............................. TAATTTCGGCTCGCATTAAAGCCATTTTTGTTTTAGC 2308446 30 100.0 36 .............................. AGAGAAGAAATATGTAGGAGTAAAAATTGAGATGTA 2308380 30 100.0 36 .............................. TTGGCTGTTTGGTTGGAAAAAGATATATGGGATTAT 2308314 30 100.0 36 .............................. TAAAATCACCCCTTCGCATAATTAAAAAACTATGTA 2308248 30 100.0 37 .............................. GAAAATGAACACAAGCTAGCCTATGATGAATTGTTAA 2308181 30 100.0 37 .............................. GCTGCAGCGGTAACAACACTAAAATTTACTCTTTCAA 2308114 30 100.0 36 .............................. TTCTTTTTTCTACGTCTTTTTCATCTTTTTTGGTTA 2308048 30 100.0 37 .............................. GTGTAATTTGCAGATCTACTTTCTGCTAAATGAAATC 2307981 30 100.0 36 .............................. AAGATTTACCTTATGAGTTTCGCGCCTACGGTTACC 2307915 30 100.0 37 .............................. GGTGTAAAATCTAAAACACAATCATTATTAGCAATAA 2307848 30 100.0 36 .............................. CAGGCTTTTGCAATTGCTAAAAATGCAGAAACTGTA 2307782 30 100.0 37 .............................. TTCTTTACGAACTCTTTTTTTTAGTATTTGAGTACAT 2307715 30 100.0 36 .............................. ACAGTTAGAGCAGTAGCACCACAGGCTTTAGCAATA 2307649 30 100.0 36 .............................. AGTACAAGTAAGTTCGGTATTTCATCCGGTATTCTA 2307583 30 100.0 36 .............................. TGTTTTATCTAGTTCCTGGTAATGGCTGCGCTTTTC 2307517 30 100.0 36 .............................. GCAGATACTAGCCGAACAGCTGCGCCAGGGAAGTAT 2307451 30 100.0 36 .............................. TTTTTTTAATAGCGTTTTGTACTTCCCCAGCTTCAC 2307385 30 100.0 37 .............................. GGCCATAGGGGTACAGCCCCGGGACGATCTACACAAA 2307318 30 100.0 36 .............................. GCGTATAAGGGAAGTAGCTGGCGAAGGCCTCTACAA 2307252 30 100.0 37 .............................. AAAGATTGTTAAGCAAAGCTTTGATATCAGAAAGTTA 2307185 30 100.0 36 .............................. TAAAAATAACACCTGTTTCAAGGTGCTTGTTGCACA 2307119 30 100.0 37 .............................. TGAAGTATGGGACATGGCTAATGCTGAACTTGATCAT 2307052 30 100.0 37 .............................. ACCATCACGTGGACTAGTCCAGAGCAAATATCTTTTC 2306985 30 100.0 37 .............................. GAGTTTATGGAACTTCAGCGAATGAAAAAGTTAGATA 2306918 30 100.0 37 .............................. TAGGCAAACATAAGGGGATTGTGTCAGGGAAAGATTG 2306851 30 100.0 36 .............................. ACTAATGACCTTAATAAACTCCATTGCCGGTGAAGA 2306785 30 100.0 36 .............................. GATTCTACAGGTTGACCTTCATAATCACCAGAATGT 2306719 30 100.0 36 .............................. GTAGTCCAGGGGGGACCAGGCAAGTATTAGCGAAGG 2306653 30 100.0 37 .............................. GTTTGGAGGGCAATATTCACCCCTCTCATAGCTTGCT 2306586 30 100.0 37 .............................. ATTTGTATTTCGTAAGGCGCGGCCTGGTTAAAGTTCC 2306519 30 100.0 36 .............................. TAACTTTCCCATTGGCTGTTGTAGCGTCAGGGTAGG 2306453 30 100.0 36 .............................. AGAAATAAAAACGCTAATAGAGAGCAGCAAGTAGCA 2306387 30 100.0 37 .............................. GTTGACATTGATCAATTAACGACCACAGGAAGGACTA 2306320 30 100.0 36 .............................. TCATTAAGATTAGTGCGTACTTTAAAAGCGAACAAT 2306254 30 96.7 35 ...............T.............. TGAGTTGTATAGTTACTAGCTACATTAGTTGCAGG 2306189 30 100.0 35 .............................. AATAATCCCAAGATATACGTTTTACAGATGTATTG 2306124 30 100.0 37 .............................. AACTATATAACCAAAAGCTACCGACTTTTCCAACCAT 2306057 30 100.0 35 .............................. ATTAAGACGGAGAAGAGAATAAGAAAAGCTTTAAC 2305992 30 100.0 37 .............................. ATTTTTAAAGAATTCTATCATCTTTGTTACCTCTCTT 2305925 30 100.0 37 .............................. ATCATTTGAAATAACATCATAAACATCTGACCTTTTA 2305858 30 100.0 36 .............................. TGCTAGATCTCTGATTTCATCCTGCGCCCTGCTACA 2305792 30 100.0 36 .............................. TTGAAACCAATGGGATCATTGAACAAGGATTACTGG 2305726 30 100.0 37 .............................. TCGGTAGTAAAACTACTTCGGTAGCTAGGAGGCGTTA 2305659 30 100.0 37 .............................. CTAATTGAAATTGATGAAAGAGAAAAAGAAATTGATT 2305592 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 80 30 100.0 36 CCTTTAATAGAACTACAGTAGAATGTAAAT # Left flank : AAAGGTATAATGGATTTAAAATTTGGTGGTGATGGTATGTACGTAGTTTTAATGTATGATATAATGATGGATAAAGATGGTGCTAAAGTGCAGAGAAATACCTTTAAAATATGTAAGCGATATTTAACTCATATACAAAAATCTGTATTTGAGGGAAATTTAACAGAATTAAATTTAATGAAGTTAAAAAAAGAACTAGGTCAGTATATACGGGATCATAAAGATTCTCTTGTAATATTTGAGAGTAGGGATGAAAAATGGTTAACTAAGGAGTTTTTAGGATTAAAAGATGATAAGACATCTAATTTTTTTTAAATGATAATCTGTCGACCTGTAGTAATGTATAAATAGATGGATATCGACAAAGTTTACTACGCCCTATACGGAAAGGATTTTTTAGAGAAAAAGCATGTTTTATATGATTCAGAGGGACTTTTAAATCATATATAGACAGAAAGTAAGACTACAAACTAGTAGTACAAGTGCTTTGAAATGAACGC # Right flank : TTAAAAATTAAATAACAGTAGTAAAAAATCAAGAGACTTCCTGAGTAAGCTGGTGAAATTATGCTTTTTAGAGTTGGGGGATATGAAATTATAAAACAATGACTAATATAAAATGATATAATGAACCTATAAATGAAAGCAGGATGAATAAGACATCACGACAAAGACAATGAAAATGAATCTGAAGATCAAGAGGAGTAAGGATATATGAACAAAACTGCTATTAGAAACTTTGCTGTTAGGGCAAGGAAGAAGTTGATTGAGAATATCATCCAAAAAGCTTATGAGCTAGGGATTGCTGAGAATGGAATCAAGGGTATTGAGGCCTTTGAAGGTGGTTTTAGAATCAAGGGTCTAGAAAATAGTAAAGTTTATAAAAAATATGAAGAAAAACAAAGGGAAAAATTAATAGCTAAGATCAAGGAAAAAGGATTCCAACAGGTTATGGAGGAGGTAGCTTATACATGGTTTAATCGTTTTATTGCTCTTCGTTTTATGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTTAATAGAACTACAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //