Array 1 270757-267667 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNYA01000004.1 Leucobacter luti strain JUb18 Ga0304814_104, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 270756 27 100.0 33 ........................... CAAGTACTTCCCCGTGACAGGGTTTTGCACGTA 270696 27 100.0 33 ........................... CTTGTGCACCCCGTCCCCGGTGGACGATATACC 270636 27 100.0 33 ........................... CTGATCGCCCAGTTGAGTGTCAGTAGTGACACG 270576 27 100.0 33 ........................... CACCAGGACGAGACTTGCGACGCTCATGGTGTC 270516 27 100.0 33 ........................... CGTTGAGCGTGATATGCCGCTACTCGCGAAGAA 270456 27 100.0 33 ........................... CCGCCCATGTACGCGGTCTACGACTTCCAAGAC 270396 27 100.0 33 ........................... CCGGCGCAGGGGGACGAAGCGAAGCTGCCGCAA 270336 27 100.0 33 ........................... CTGTTCGGCCATCCATCCTGAATCGAACGTCTC 270276 27 100.0 33 ........................... CTCAAACCACTCCCGGGTGTCCTGAATCGAGAG 270216 27 100.0 33 ........................... CGCGGATCTGTGAAGGGTGCCGCAGTTACCTTC 270156 27 100.0 33 ........................... CGCATCATTCCGATCAGCCTCAACAAGGAGATT 270096 27 100.0 33 ........................... CGCCAGCTTCTCGAGTACCGCGCGTGACGCGGC 270036 27 100.0 33 ........................... CGGACCGCCTGCGATGTACTGCCCGTTGCCGTC 269976 27 100.0 33 ........................... CCGGGGGTGCCGGCAGTAGCACTGGTGGGCTGC 269916 27 100.0 33 ........................... CATGATCATCGACACCACGGGCGGGGGGTCCGT 269856 27 100.0 33 ........................... CATCGAAAATTGCACTTTTGAGGGTGGCAGCGT 269796 27 100.0 33 ........................... CGCCTCCGAAACGTTCTCAAGCTTCGACGGATC 269736 27 100.0 33 ........................... CCGTGGAGCGCACGACCTGTCCTGTACGGTTCG 269676 27 100.0 34 ........................... CTTCGCGGACCTCCCCATTGTTGACCCTGACACA 269615 27 100.0 33 ........................... CTTAAATGGCGTATCCACCAACACGACTCCACC 269555 27 100.0 33 ........................... CTGGTCCTCGATCGATCGCATCAGAATGGCTGC 269495 27 100.0 33 ........................... CTCGACGTCGGCGTTGCCGGTGTTCTTGCGCTG 269435 27 100.0 33 ........................... CTTGTTCACGCCCTGCGGGTACGCGACACGGAA 269375 27 100.0 33 ........................... CTAGTGGCCGCTGCTACCCGATGAACAGAACTA 269315 27 100.0 33 ........................... CCCGAAGAAGATCACATACGCCAGACCCCGTCC 269255 27 100.0 33 ........................... CGGGGCAGACTTCTTCTTCAGCTCCGCATACTT 269195 27 100.0 33 ........................... CGGCCGGCATCGCGAGAGGGTCAACCTCGAACA 269135 27 100.0 33 ........................... CGGTTCAATCGGATCTGCTAGATCACCGCTGGC 269075 27 100.0 33 ........................... CCCACTCCATCACGAGTGTCGGGGCGGGGAGCA 269015 27 100.0 33 ........................... CTGGCTGAGAACGTGACGCCTGGCGAGGAAATG 268955 27 100.0 33 ........................... CGCTCACCCGAGCCTGCGTTACATCGTTAGGGA 268895 27 100.0 33 ........................... CACGATGACGATGAACACGCCGAGGCCGTCAAG 268835 27 100.0 33 ........................... CACGGCGCGATGCTCTGCCCCGACACCAGACGC 268775 27 100.0 33 ........................... CACATCCGCAACGTGGCGATCAGCGCGCGCCGG 268715 27 100.0 33 ........................... CCCGTACGCGGGCCGCGACCTCTGGAATAAAGC 268655 27 100.0 33 ........................... CTCGTTGCGCGTCGCCTGATAGCGATGAATTTC 268595 27 96.3 33 .............C............. CTCCGGCTCACCATACGGGAGAATTTCGTTATA 268535 27 92.6 33 G................A......... CCAGTAGGGGGTGCGTAGATATGGCTGTAGATC 268475 27 100.0 33 ........................... CGGTGTTTAAACGTCGCGTTAACCGGGCAGAGC 268415 27 100.0 34 ........................... CACCGGCTGCAAGATGTTGGTCCACAGCCAGTTG 268354 27 100.0 33 ........................... CTGCCCTTGAGCGTCCGCGGTCTGCGAGGTGAG 268294 27 100.0 33 ........................... CAACCACGACGGAAGGCACCCACGCACAATGGC 268234 27 96.3 33 ..............A............ CGTCGCGCCGGGATCGATCAGTTGATCGGTGCC 268174 27 100.0 33 ........................... CACCGCGAGTGGGGGACCTGTCGCAGTACTTCG 268114 27 100.0 33 ........................... TCGGTGCCGACCCGCAGCGTCGACGACCCGAGC 268054 27 100.0 33 ........................... CACGTGCCCGCCGGGAGAATTGATGCGGAGGAT 267994 27 100.0 33 ........................... CATGCGCACCCGCAACTGCTGCAAACCCTTCAT 267934 27 100.0 34 ........................... TTGCACTTTTGAGGGTGGCACCGTGAATCAGGAA 267873 27 100.0 33 ........................... CTCGAACGCCGAGCACACGAGGATGAGCGTGAC 267813 27 100.0 33 ........................... CGACAGCTTGCCGAAGAAAGAGTCCAGCAGTGC 267753 27 96.3 33 ........................G.. CTAAACCATTCGCGGTGCATGGTGTCAAAACCA 267693 27 77.8 0 ................T.A.TG..T.T | ========== ====== ====== ====== =========================== ================================== ================== 52 27 99.2 33 CTGCTCCCCGCGTAGCGGGGGTGAACC # Left flank : CGGAGACGCAGATTGTTGAGAGCGGCGTTCAGTACAGGGAGACTAAACGATGATCGTGATCGTACTGTCTGCCTGTCCGCCGGGGCTGCGGGGGTATTTGACTCGGTGGCTGCTCGAAATATCGGCGGGTGTGTTCGTGGGGAAAGTCTCGAAGAAGGTGCGGCTGCTGCTCTGGGAGGCCTGCGTCACCATGGTTGGGAACGGGCGGGCCATACTCGTGCATCAGGCGAAAAATGAACAGGGCCTCGGATTCCTCGTGCACGGTCACCACTGGGAGCCGATTGACATGGATGGGATACGGCTGATGCTACGTCCAGATCTAGGTGCTCGGGCCGGTTCCACCACCCCGCAGTTCACTCCGCCGACCCAGGCACTGGGGTGGAGTAAAGCGAGCAGGAGGCGGAAATTTGGATAGTCGTGAGTCGCTGAGCCTCTGCACCATTTCTATTCGAGTGATACTGAATCAGCACTTGGTGCAGTAGAACTCCAGATCAGAGAGC # Right flank : CGGCAACCGTGATGCGGTGGCCGCCCGATCCGCTGCACCTCGCAGGGCGAGGACGCGCCCGCCTTGGCGCTGCAAAGCTCTGGTCTGCGCCATTGGATTTCGGCTGAGACTCACTTGGAAGAATGTGGCGGCCAAAATCAGAACGAAGCCGCGTGTTGGGTGACTCAGCGGAGCTGGGTGCAGCGAACTGACAAGTCGGCTCCAGATGGTGTGAATATCTGGCAAATTCACAAGTAGCGGGAAGCATTGCCAGGCATCCAGCCAGGCAGTCCTGCCGCATTTCGTACAGGGGAGATAGCTGACGATCGTGCGCGCGACTCTTGGGTGCCGGACTCTGGAACGGGCAAGGCAACCCGTCGCCACGCTTGGCCTTGCCCGGCGCGGGTACCTGGTGAGGAAGAAGTCTCCAGTCGTAAGTGAGACGACGTCAAACGGGGATTCACTCATGGCTAAACCCCAATCTGCATTGTTGCGATGCGAAGTGGAATGAGGGGGCTAGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGTAGCGGGGGTGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.00,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], //