Array 1 422228-423585 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG666296.1 Anaerococcus tetradius ATCC 35098 SCAFFOLD2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 422228 36 100.0 31 .................................... CAAAAACTCCTTATTCCTAACCTTTTTATGA 422295 36 100.0 31 .................................... TGCGTAGACCTATTTCTATGCTTTGTGATTC 422362 36 100.0 30 .................................... AGGTAAATCTCTTTCCAGCATCTCTTCCTA 422428 36 100.0 30 .................................... GTTTATAATGGAGTTAAAGGAGAACCCTAT 422494 36 100.0 30 .................................... TAGAATACTCATTAGCATATTTCCCTCTAA 422560 36 100.0 30 .................................... CATAGAAAATTGCGGCAACGCTAAAGATTA 422626 36 100.0 30 .................................... AATTTCTCTTTCTTATCATTTCCCTTATAA 422692 36 100.0 30 .................................... TAAGTAATTATTATATTTATCTTTCAATTT 422758 36 100.0 31 .................................... TCAGAAAAACATCATCATTCACATACTCGAT 422825 36 100.0 30 .................................... CTCACTCCCGGAGGTCATTATATATTAATA 422891 36 100.0 30 .................................... AGTATAGGTAAAGCCTGTATTCTTAGCCCC 422957 36 100.0 31 .................................... GCAGGCAGTCCGACCACTATAAACGGTATGG 423024 36 100.0 30 .................................... AAAAGCAATGATACAAAATACAAACTTTGA 423090 36 100.0 30 .................................... TTTATATCAAGGAACAAGGATCACTAATCT 423156 36 100.0 30 .................................... TATATCATCTATGAAATGTTTATCTCCATC 423222 36 100.0 30 .................................... GAGCCTTGGCTGGTGGATATAAGATGTTTA 423288 36 100.0 29 .................................... CTTTGCATCGGCAAAGGGATAAATGTCCC 423353 36 100.0 30 .................................... TAATCATAAGAGATTATCCGTATTATTAGA 423419 36 100.0 30 .................................... AAAAAGACTTTATTAACCCATATCCCACAA 423485 36 100.0 30 .................................... TTATGAATTGAGGATAAAAAAATTATTAAA 423551 35 77.8 0 .............A.-....TGC...C...C....A | ========== ====== ====== ====== ==================================== =============================== ================== 21 36 98.9 30 GTTTGAGAGTTATGTAATTTAAGTAGTAAGTAAAAC # Left flank : TTAACATAAATCCTAATGATAACAAAATATTAGCTAAATTATATGAAAAATTAGGACAGGAAATAACTTACGAAGATATCTATTGTTATAATAGAAATTTTAAAAGTGCTCTATCAAAGCTATTAGAAGAGCTATCAATGTTAAGTGAATATGACTTCAAATATGAAGATGTAGATTATAAATATATATTCAAGGCTGTAGGATTAGAAATTGATACAAAATTTACAGGCTTGATGGCTAATATAATTGAATATCTTGATATATCCCACAAACTTCTAAATAAAAAAATATTCTTCATAGTAGGAATTGACGATTACTTTGAAGAAAGAGAATTGTATGATTTAAATGAATATCTGTGCTATAATGATATTATAGTAATTTGCTTACAAAATAGGTTAGATAGAGATCTTCTTCCTAATGAAAATCTTAGGATCATAGATGAAGATTTAGGAGAAATCTAAAAAAGTAAAGCCTCAAACCTCAAAAGTCGTTAATTTGAG # Right flank : ATTATCAGCTCCTTAGTCCTATAGATGATTTTTGTGTTCCAATCTTACATTTTTAAATAATAAATTTTTTAAAATTTTAAATCCACTCCTATGGAGTGTATTTTTTTGGGGAAAATTCCCGATTTTTTTTCTATATATTGGTAGAAAGATTTTGATGAGATTTTATGATTGTAAGAAGAGTTAAGAAAATTAAAAATTTTACTATCATGGATAACGCCTATCTAACGATATTAGGATTTCTTTTAAGGCGAAGTGAATAATGACTTATCTGTTAAGTTTGCCAGATGATTTTGTGGTTCATATTGATCAAATTGTGGTCAAATCTAAAGATGGAATAGCTTCTTTTAGGTCTGGCATTGATGAATTAATCAAGTCATGACGAGGACTTTTCCCCTTTTATTTGCAAAGATATTTTACATAAACTTTACATGAGTTTTAGATAAGCTAAACAATTGTCTTGTATTATATACTTACAAAATAAATGATTTTAATAAGGAGAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTTATGTAATTTAAGTAGTAAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //