Array 1 219707-219854 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYEV01000001.1 Acinetobacter tjernbergiae DSM 14971 = CIP 107465 adgTJ-supercont2.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 219707 28 100.0 32 ............................ GTAAAACACGCGGCTGGACAAAAGAAAGTGAT 219767 28 100.0 32 ............................ TATCAATGTAGGGCTAAAATTCGCATCAAAAT 219827 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GATATCCGAAAATGGCTAGATCGTTTATTAGATTACACACATATCACGAGTGTACGTCCTGTCCCTGAAAATAGAATTACAGGCTATGCCATTTATAGGCGTAAACAGGTGAAAACTAATCCACAGCGTTTGGCTCGTCACCGTGTGAAGCGTGATGATATTGGTTTTGATGAAGCATTGGCTCGTTATAGTAATGTTGTAACAACAACGGATTTACCTTATATCCAATTGCAAAGTTTAAGCACTTCTGATGAACAAGATAAGAGACGGTTTAAGTTGTTCATTGAAAAGAAATCTGCTGAAAAATCTGAAACTCAGGTTTTTAGTACTTATGGTTTAAGTTCACAGAGTTCTGTACCCGAATTTTAACCCAATATTTTTATACTCTTTAACAGCTTAATAAAATCAATAAGTTATAAACGTGGGTTGAAACTTGGGTCTTTTACTAGATTTAAAGCTTAACTCACTGTTATAGCTTTATTTTTTGTGTTAATATTACA # Right flank : ACCATATCCGCCGCCAGTGCTTTGATTGCCT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 10-157 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYEV01000025.1 Acinetobacter tjernbergiae DSM 14971 = CIP 107465 adgTJ-supercont2.25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 10 28 100.0 32 ............................ AGACTCTACAGCACATGGTTTATTCCAAGTAT 70 28 100.0 32 ............................ ATAAGCAATAGGACTGCTTAAGCTATCTTGTA 130 28 89.3 0 A...........A...........T... | ========== ====== ====== ====== ============================ ================================ ================== 3 28 96.4 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GATTCCCACG # Right flank : AGTTTAAATTAAATATATTTTTATTTCCTAGTCATATTTTATTAGTTAAAATAAAAAAATAAAAAGAGTTTATGCTTTATTATTTTATGCGTAATTCAATATTATTTTTTGGGACTTATATTTGTGAAAAAATATCCTATTATTCTAAGTATTCTGTTATTTAGTTTCATACAAAGCGTATGGGCAAATATGAGTCCGAAAGCTCGAATTATCAATGGCAATCTGACTACAGAAGCACAAATCCCGTGGCAAGTTGCACTCATAGCTAGTCCCTTAGACCCTTATCAATCCTACATTTGCTCAGGAAGCTTAGTTGCAGATCGTTGGGTGGTGACAGCAGCACATTGTATTGAACAACTCGAAAAACAAAACAGTGATTATTATATTTTGATTGGCGCACAAAACTTACAAAGTATTCAATTAGGACAAATTATTAAAGTTAAAAAGGGGTATATACATGAGAAATATAATAATCATATTTATGATAACGATCTTGCACT # Questionable array : NO Score: 5.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.90,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [6.7-91.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3758-3905 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYEV01000066.1 Acinetobacter tjernbergiae DSM 14971 = CIP 107465 adgTJ-supercont2.66, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3758 28 100.0 32 ............................ TAGTCCGAACCCGCTAAGTGTCGCGGCGGTCA 3818 28 100.0 32 ............................ TATTTAGGTGGACGTAGGTGGACGGATGGTAG 3878 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : CCAGTAAACGCAATTTGTCTTTGCAGATTACTTATTTCAATCGTGTCCGCATCAATAATTGTAATTTTACCCACACCAGCTCGCGCGAGTAGCTCGCCACTCGTACAACCTATTCCCCCTGCACCAATAATTAAAACATTCGCAAGTTTTAATCGTTCTTGTGCATCTATGTCCCAACCATCTAATAAAATCTGACGACTATAGAGATGCATTTCCTCATTACTTAGTTCAAATTCGTTTTCTGAATGATTTGACACATTGGTTCTCTAAATTGTTTTAACAGTATTAGATTTTATGGATGTGGATGTGATTAGGAAAGGAAATTCTATTATTTAAGTTGATTTAGCTTTGACAATCCCCTTTTTTTACCCCAATATTTTATACACTCATTAACAGCTTAATAAAATCAATAAGTTACCACTTGGTCAAAAACTTTGGGTATTTACTCAAGTTTCTTGATAAACCTATGTTTTAGCTTGTATTATTGACTCTATTTTACT # Right flank : T # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //