Array 1 91684-90862 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_APXL01000411.1 Escherichia coli BCE008_MS-01 gecBCE008MS01.contig.415, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     91683	    29	 100.0	    31	.............................	CCGGCGAAGTCTTTCCCTCTGTCATCGTGTT 	
     91623	    29	 100.0	    32	.............................	CTTTTCCGAGCTCACGAGTTACCGGCTATCGC	G [91622]
     91561	    29	 100.0	    32	.............................	TTGACCCATGCGCTAAGGTCAAAATGACCCAA	
     91500	    29	 100.0	    32	.............................	CACTGTTATTCAGAGGGGTAAATAAAAAATAT	
     91439	    29	 100.0	    32	.............................	GCGCGAGTGAGTTAATTCCTCAGACTATCGAC	
     91378	    29	 100.0	    32	.............................	ATTTGCTCGCGATGCGCCTGCAGCTGGAACCC	
     91317	    29	 100.0	    32	.............................	GGGCTAAAAGACGCGTCGCCGCCAGGCGGCTT	
     91256	    29	 100.0	    32	.............................	GGGCTAAAAGACGCGTCGCCGCCAGGCGGCTT	
     91195	    29	 100.0	    32	.............................	GGGCTAAAAGACGCGTCGCCGCCAGGCGGCTT	
     91134	    29	 100.0	    32	.............................	GTTTACCGCCCCGCAGAGGCGCTGGCAGATCC	
     91073	    29	 100.0	    32	.............................	GGATGACCTGTCGCTAAAACTCGCCGCGTACA	
     91012	    29	 100.0	    32	.............................	GGATGACCTGTCGCTAAAACTCGCCGCGTACA	
     90951	    29	 100.0	    32	.............................	TCCGTTTGGTCCACCAAATGTTTGATGCTTCA	
     90890	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        14	    29	 100.0	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTCCTTGCTGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGTGGTCACCGGGGGCGCGGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT
# Right flank :  GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACACCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAACTCCTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTCCCTTACTGCTTCAGGGGGTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,5.51   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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