Array 1 205862-206072 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQXB01000003.1 Corynebacterium mastitidis DSM 44356 B140DRAFT_scaffold_2.3_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 205862 28 100.0 33 ............................ GCACTCCTCACCCCAGCCGAATACACCGCCGCC 205923 28 100.0 33 ............................ CTCCCGGGCCTGGTGGTGCTTCGTGACCTCGTA 205984 28 100.0 33 ............................ CACCCTCCCGCACACCGCGCACCGCAACCGCGC 206045 28 75.0 0 ....................ACCCG.TA | ========== ====== ====== ====== ============================ ================================= ================== 4 28 93.8 33 GTGTTCCCCGCGTATGCGGGGGTGAGCC # Left flank : GCCGGGATGAACTGGGGAGAAGACGTGGGGGAATACCCATGATGGTCCTGGTAGTAACCGCCTGCCCCGCGGGTCTCCGCGGCGACCTCACCAGGTGGCTCATGGAAATATCCCCAGGCGTGTTCGTGGGGAACCCCACCGCGCGGCTACGCGAGAGCCTATGGGACCGCACCGTGACGCTGGTCAAGGACGGGCGGGCCCTGCTGGTGTACAGCGCCCACAACGAACAGGGAATGGAGTTTAGGACGCACCGCCACGACTGGCAGCCCACCGACTACGAAGGGCTCACACTCATGCTGCGGCCCCACGCCAAGCCGCCCGAGGCCAGGCGCAGGACGGGGTGGAGCACGGCGAGGAACATGCGCCGGGCACGGAGGTGAAGGCAGCGGTGGGGCGGTTGATTGGCGCGAACCGTTGGTGCGGCCAGGGCAGTGGAGGGGCGTGAAGGGAAGTTGTAGCTAGAATAAGGAATCGGCTCTTGTTTCTGCTGGTCAGGAAGT # Right flank : ACTGCCTGAAACGAATTTTCTAACACTACCTGGCCGCATGCGCTACGGTTTGTGGACCTGGGAAAGGATGCCCGGGGACTTGGGTACATCCGGGTTCCCGGCCACAGGGTGTGCACGTTCTTCCTCATGTTGGCTACCTATGGCGTGGTGTATGTCAAGGACGCGAAGAAGGCGAAGCACTCGGAGCGCGCACGGTATCATGACAACTGCATGTGTGGTGCTAGGGGGGTGTCCAGCGACGCCGACGTGCCCTGATCGTCAAAGACCTGGAGGCTAAGTGGTACGAGGTGGCTCACACCGACCGTAGACCTGTGGCAGATCAAAGGGAAGCATGGCAAGAATATGTTCAGAAGAAACACCGCGCTATGTGGCGACCAACTAGTTACATCAGCCTAGACCGCGCCACACCGGTAGGAGAACCTCGCGGATACCGTACACAGCAGCCCAGCCTGGCGAGCGTCCGGAAGAATACTCGTGATACTGGGCAATGGGATGAAGGA # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTATGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 18716-18566 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQXB01000010.1 Corynebacterium mastitidis DSM 44356 B140DRAFT_scaffold_9.10_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18715 28 100.0 33 ............................ CTAGGAGGGCTTGATGGTCACGGTCAAGACAGC 18654 28 100.0 33 ............................ CAAGCCGGAGGTGGCCGCAGCCCAGGCGTACTT 18593 28 96.4 0 .....................A...... | ========== ====== ====== ====== ============================ ================================= ================== 3 28 98.8 34 GTTTTCCCCGCGCATGCGGGGGTGAGCC # Left flank : TATGCTGCCGATAGCAGCCCGGATGAGACAGAGGAGAGGTGGGAACGTGGCGAGGACCCTATCGACTGATGACCTGATCTGCTTAGCGGAGGCGGACGGGATCAGTGTGGAGTGGCATACCGGCGGCCCCAAAGGCATGTGGATACCGAGCCGGAGGGCAATCAGCCTGCGGCATGGCCTCGATGAAATCCAGTCCCGCTGCACCCTAGCCCACGAGCTGGGGCACGCTTATTACAATCACCCTGGCGGGCATGACCCTAAGCATGAGGCGGCGGCGGATCGGCGGGCAGCATGGCTTTTAGTATCGGCGTCGGATTATGCTCACGCGGAGGGTATCTACGGCCCTGTGCCTGCGCGGATCGCTGCTGAGCTGGGGGTGACTGTGCATTTGCTCGGTGTGTGGCGTGAGATGTGGGACTCTTGCTGTAGCGAGGCGGTATGAGGCGGGAAGGTTATATGTAATTCCGGGTATAGTGGTGTGTTGCCGCAGGTAGTTAAGT # Right flank : TCTATAGAATGAGTGTGCTAGTCAAAGAAAGGGTGCATGATGACGGTTAAGGGTGTAGAGCTCTTCGCAGGCGGAGGCGGACTCTTACTAGGGTCCGCGCTCGCTGGCGTCGAGCACATCGCTGCAGTCGAGTGGAACAAGTGGGCATGCCAAACCATGCGCGCCAACGCGGCCGCAGGCTACCCACTTGTCCAGGGCCTCCGCGTCATCGAAGACGACGTACGGCACGTCAACTGGGACGAGGTCACCGATGGCGCCGATATTGACGTTGTCACCGGCGGCCCCCCATGCCAACCGTTCTCCCTCGGCGGGCTCGCCCGCAACGCCGATGACCCCCGCGATATGTTCCCCGCCACCACAGCCGTCATCGAGAAACTACGCCCACGCGCCTTCGTCATCGAAAACGTCAAGGGCCTTACCCGCGCCAGCTTCAGCGACTACTTCGAGTTCATCAAGCTGCGACTCACCCACCCCGAGCTGCGCGCCCGCGACGGTGAATC # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGCATGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGAATGCGGGGATGAGCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //