Array 1 113207-108156 **** Predicted by CRISPRDetect 2.4 *** >NZ_MAUH01000071.1 Chryseobacterium sp. CBo1 contig_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 113206 46 89.4 30 A..-.A.GA...................................... CCGTTGTTATGTTGTTTGTTGATACAAATA 113130 47 100.0 30 ............................................... CGAAGGATCTACATTTATGGAAATATCGCT 113053 47 100.0 30 ............................................... CAGCAGTCACGGCTTCAGCCACTCCATTTC 112976 47 100.0 30 ............................................... AACATCGACTTTAGGAACTAACTCGAAATA 112899 47 100.0 30 ............................................... AAATAAAAGTTATGGGTTGTGATATTCACA 112822 47 100.0 30 ............................................... CGTACCAACGTCAACTACCTTAAGTTTATA 112745 47 100.0 30 ............................................... CTCGAACATTTCGCGGTAGTACTCCGACAT 112668 47 100.0 30 ............................................... CATAAGTTAATAGGATTCGCCCCGGTTACA 112591 47 100.0 30 ............................................... TATGCTCGTTTGTGATTGGGATGACCTCAA 112514 47 100.0 30 ............................................... TAATAGAAGTTTTGGCAGCCTTTGCTCTCA 112437 47 100.0 30 ............................................... AGTAAGTCCTTTGTGATTAACTTCGACTAA 112360 47 100.0 30 ............................................... ACATATCATATCTGAGATAGGCTCCTAAAG 112283 47 100.0 30 ............................................... TATTTTTTGTCTGTAAGATTACTCTGCAAA 112206 47 100.0 30 ............................................... GCTCCTGAAAATGAAAGCCCGTAAAAAAGT 112129 47 100.0 30 ............................................... GTCTTTTGGCAACTCTGCTACTACTTCGTC 112052 47 100.0 30 ............................................... CCGTTCAATGGAGCTATAATGATTCACCCT 111975 47 100.0 30 ............................................... CTATTAATATGAAAACCGAACAAATAGGAA 111898 47 100.0 30 ............................................... ATATTCGGCTTACTTGCCGTATGAGTTGGA 111821 47 100.0 30 ............................................... AATAAATAATCAATATCAGAAGTAAAATTC 111744 47 100.0 30 ............................................... CACGCCATTGTATTTTTGTGAAATTGTCAA 111667 47 100.0 30 ............................................... CGGATTCAAAAACTCAAGCTCTGATAAGAA 111590 47 100.0 30 ............................................... TTTGTTGCAACACCTTTGACATCTTCGATA 111513 47 100.0 30 ............................................... CGAAAAGATGCGAATTCCGAAGTTAAAACC 111436 47 100.0 30 ............................................... CCGGGAAGCCGAAAACGTTTAGAGTAGGCA 111359 47 100.0 30 ............................................... ATACCGAGGCTTATAAAGCCTTGCAGGAGA 111282 47 100.0 30 ............................................... CAGGATGAGGTAGTAGAGCATATCAGGGCT 111205 47 100.0 30 ............................................... TATAATCATATCTATACATACAAACACACA 111128 47 100.0 30 ............................................... TAAAATAAAAATAAAAATGTGAAAAAAACC 111051 47 100.0 30 ............................................... AGACGTAAGGTTGGACTGGGAAATTGTTGC 110974 47 100.0 30 ............................................... GTCTTAGAAAAAGTAGATAAATTAGACCGA 110897 47 100.0 30 ............................................... TATTTCTTCTTACAATCATAGACGGATTAA 110820 47 100.0 30 ............................................... AGAAAGAAATTTACAATTGGTAGCTGTAGA 110743 47 100.0 30 ............................................... AATGCTTTAGAATATAACGCTCCCGCATCA 110666 47 100.0 30 ............................................... TGGTAGGAAACGCTTTAGTAATAACTATCA 110589 47 100.0 30 ............................................... TGCTGTGCATCATTGCGTAAAAAGTAGAGG 110512 47 100.0 30 ............................................... CAAAACTGCAATTATCCGCTTACAAATATT 110435 47 100.0 30 ............................................... TATGTCTAAACTTAGATTAAGTATAAACGT 110358 47 100.0 30 ............................................... TAAGCTACCATGAAGGCAACATCAACACTG 110281 47 100.0 30 ............................................... CACCGCCATTAGGACCCGAACCGGCTCCGG 110204 47 100.0 30 ............................................... TTTATTTTTATACATTTGTAACACAATAAC 110127 47 100.0 30 ............................................... TGGTATTTCCACGTTGTAAGTGATTGGAGT 110050 47 100.0 30 ............................................... ACGAAAGGAGGTTCTGAAAGTTATGGAGAT 109973 47 100.0 30 ............................................... TATCAATTTCTCAACAAAGAATTTGCCAAC 109896 47 100.0 30 ............................................... TCACTAGAATGGGATGGAAAGAGCAGGATA 109819 47 100.0 30 ............................................... AGGACAAAGAAGTTTAGATAACTTAAAGGG 109742 47 100.0 30 ............................................... AGCAGGATTAGCATTTGATACAGATGTGCA 109665 47 100.0 30 ............................................... ACCTCAGATGCTAAGATGGCAGAGATCTAC 109588 47 100.0 30 ............................................... GCTCCTGAAAATGAAAGCCCGTAAAAAAGT 109511 47 100.0 30 ............................................... TATGATGGCAGATAATAGAGTTTTAAAGTA 109434 47 100.0 30 ............................................... TTAAATCTTTTTGTAGAGTAAATAATATAG 109357 47 100.0 30 ............................................... CGTAGGTAAATACTCTGTACCTAGGTCAGC 109280 47 100.0 30 ............................................... CTAATGATGAGTTTGGGGATAGCATCAAAG 109203 47 100.0 30 ............................................... TAGAGCCGTTCACAGTTTAACTAAAATATC 109126 47 100.0 30 ............................................... TTTAAGTTTTAAAGATTAAATAAATTATAT 109049 47 100.0 30 ............................................... CTTACCTCTATTGATTTAGATTACATTTTA 108972 47 100.0 30 ............................................... TAACGTTATATGTTTTAATTACTCTACAAA 108895 47 100.0 30 ............................................... TGAAGAGATTTAATACCTACCATATTTCTA 108818 47 100.0 30 ............................................... CTTTACTTTTAAAGCTCAGACACGTTTATC 108741 47 100.0 30 ............................................... CTCCGTTAATTTTTGCACCCATGTAATCGT 108664 47 100.0 30 ............................................... TTTGAGAATTAAGACCAGGCTGTCTTGTGT 108587 47 100.0 30 ............................................... GATCTCTAAAATATTCATAATAACATAACT 108510 47 100.0 30 ............................................... TTTGAGAATTAAGACCAGGCTGTCTTGTGT 108433 47 100.0 30 ............................................... TGGTGTCTTCAAAAATATTACTATCTTTGT 108356 47 100.0 30 ............................................... GATGCACTTGTTTGTAATGTCTCACTAATA 108279 47 100.0 30 ............................................... TTCATGCATAACAGGAGCGACCATAGGCAT 108202 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 66 47 99.8 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATTACACAAC # Left flank : AAAGCAAAGCAAACATTTATCTGGATGAAATGTTAGTGGATGCTAGTTCTCTCAACGGAATAGCTGTTGCCAATATTGCTATGGTTAAAATCATAAAAGATGGTGGTCTTGGGATGAGCGGCGGCGGAAATGGCGGTGTGCTAATTTACACTAAGCGTGGAGATACCCAGAGTCCCATTGAAAATAAACTTTCTACGATGGTCGATTTAAATTTTTTCGTGATGGAAGGTTATAATGAATCTGAGAAATATCCTGATTCCGATTATGGTAATTCTGAGCTCTCAAAAATCAGTACCGATTACCGACCTGTATTGTTCTGGAATCCTACTCTTGAAATTGATGAATCCGCTCCTGCCATAATTAACTTTTACAATAATGATTCAGCGAAAAAATACCGATTTATGATTATGGGATTCGATGCTGAAAAATATATACCGGTTTATTATGATAAATTGATGCCTTGATGATCAACGCATGAAATATTGCCAATCATTTTGTGA # Right flank : CTCAAAATTTAATCCGTTGATAATCAACGGATTTTTCATTTATTTAGGATTCAAAATTTAGAATAATTCAAGTTGTTGGAAGGTCGGTGGCGGTTCTTCTTTATTCCTGGCAAAGAAAATTTCAATATCCCCAAATTGCTTATCCGTAATGCACATAATGGCAACTTTACCAGCTTTAGGAAGCATAAACTTGACTCTTTTAATATGAACCTCAGCATTTTCACGGCTTGGACAATGCCGAACATACATTGAAAACTGAAATAAAGTAAAACCATCATCCAACAAAGATTTACGAAAGCGATTGGCATCTTTCATATTGGCTTTAGTTTCTGTCGGCAAATCATATAATACTAAAACCCACATAATTCGGTACGCATTAAACCTTTCGGCGTTCATATCAGTTCGGGATAAGAAATCAGTCGTTTTTCTCCTGTGTAACATTTGTAAAGTGAAGTAGCCGTTGTTTTTACTGCTACCAACAACGGTCTTGTTTTACTTTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATTACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATTACACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.10,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //