Array 1 10396-8645 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHFV010000001.1 Deinococcus metallilatus strain DSM 105434 Ga0416734_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 10395 37 100.0 35 ..................................... TTCGTCCTGATCGAGGTTCGCGGCGCTCTCTTCCA 10323 37 100.0 36 ..................................... CTTCCCGCCCGTGGTGTGCAGGTGGGCGCGGTTCAC 10250 37 100.0 35 ..................................... TAGGTAGTCTCCCGGCGTGTACAGGTGCCCGGAAG 10178 37 100.0 36 ..................................... CGGCGCAGGCCAGAGCGGGGGACCAGGGAAGCTGGG 10105 37 100.0 34 ..................................... GCGCCCCGCCTCCAGCAGAAACAGGCGGCCCGGG 10034 37 100.0 34 ..................................... TTGGGCGTGTTCGGCGGCGTGGTAGGGCTTGCAC 9963 37 100.0 36 ..................................... CGGCACATACAGGAACACGCGCGGCACGCCCGGCAC 9890 37 100.0 34 ..................................... CGCAAACAATTACTCGGCCTTCCGCTGATCCCCG 9819 37 100.0 33 ..................................... TGGTAGGCGCCGAGCTGCGCCTGATAAATCGCC 9749 37 100.0 33 ..................................... GGGTGGATCGACAACCCGACCAACTCCAGCCGG 9679 37 100.0 34 ..................................... CCGAACAGTGCCCGTTCCAGCTCCACTCGCAGAC 9608 37 100.0 34 ..................................... GTGGGCTGATTCTCCACGTAGTCGCTGAACCACA 9537 37 100.0 37 ..................................... CGAACTCACGCCGGACGACGGGGAAGCATACGACTAC 9463 37 100.0 32 ..................................... TGCTTCGGGACGGCGCTTCTCGCCTCGGTGGT 9394 37 100.0 36 ..................................... ATGGGCGTTCTGTGCGGCCTGTTTCGCGGCGGCATT 9321 37 100.0 34 ..................................... GCCTCAAGAATCATGCCCGCCAGGGTGCAGCCGC 9250 37 100.0 36 ..................................... CTGCTGGCCCTGACGCCCGACCCGCAGCCCCTCCCC 9177 37 100.0 36 ..................................... AGTGCGAGCGCGGCAATGGCAATCTTCCCTGTCCTG 9104 37 100.0 33 ..................................... GCCGTGGACCTCCACCCGGAAGGGGCCGGGCCC 9034 37 100.0 32 ..................................... GCCCCTGGCGGACGTGAACGCCAACAACCGCG 8965 37 100.0 34 ..................................... GCCGCACGCTGCGCCCGTCGCTCAGCTTGAGGTT 8894 37 100.0 35 ..................................... ACGTTAGAAAGGTAGGTTGCAATTTGTTTCACGTG 8822 37 100.0 34 ..................................... CTCCGGGCACGGCTCCGCGAATTCCACGTCCAGC 8751 37 100.0 34 ..................................... ATGAGCAACACGCACCGTGTCAACGCCAAACCGA 8680 36 97.3 0 ......................-.............. | ========== ====== ====== ====== ===================================== ===================================== ================== 25 37 99.9 34 GTTGCAGCCTGCCTTTAGGTGGGCTGAGGATTGAAAC # Left flank : CCATCCCGCACCCCACGATTGTAGAAGTCGGCGGGAGCGACATGTCCCCGCCGACCTCGACCCAGGAGCCGCCTATCCGCCGATGGGCCAGACCACCTCGTTCAGCGGGGTTACCCCCGTGTTCGCCCCGGAGGTATCCGCCGCCCAGGCACCCGTTCCACCCCACAGCAACAGCAAGCTCAACAACAGGTTTCGCATTCATTCCTCCCTATCCCCAGGCACGGAAAAACCGCGTTGGGACGCACTTGAACGCGGCCATCGCGTTCTGTCGGGGAGAATGCGGGGCCAGCCCGACACTGGCTGACGGGAGGAAAAACAGGGCGCGAACCTCCTGCTCCGTGGAGATCAGGGGAGGTTCGCGTGATGTGGCAGAAGTCCTGCTGGACGCCCGAGAGGCGATTGTGGCTCTGCGGTCAGGTCGGCAGGAAGGTCAGTGGCCCTTGTGGTTCGCGCCGTCCAACGTCAACCTTGCGTGTTGCACGAAAAGCGGGCACACTACC # Right flank : CCCTGCCTCCATGGCGAGTGGCCGCCGGAGGCTCCCGTTGCGGCCTGCCCGCAGCAAGCTCCAGGCTGAAACTTAACAGAACAGCAATGCTAGACGGCTTTTCCCTCAACTCCTGAGCGGCGCGGGGCGGCACCATGACCTATGGTTCTCCGCGCCTTTGCTGCATGGCCGCTGGCGCTGTTGCTCCTGGCGGGCCTCGGGGGTGCCCTGCCCGCCAGTATCACCCTCAAGAACATCCGCCACGAACCCCAGGGACCGGACAACTGCGCGCCGGTCACGGCGCTCACGGTGCTGGGCTACTACGGCACGCGGGTGACGCAGGCCCAGGCGGCCCGTGCGCTGAAGGACGGGCCGCGTGATCCTCAGGTCACCAGTCTGGAACTCGCCGCCTATCTGGGCCGCTTCGGGTTGCGGAGCGTGATCCGGTACGCGGGGACGCCTGACCTGCTGCGGGACCTGCTGGCGCGGGGGATTCCGGTGGTCCTGCAACAGCGCCTGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCTGCCTTTAGGTGGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.60,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA // Array 2 22042-22868 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHFV010000001.1 Deinococcus metallilatus strain DSM 105434 Ga0416734_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 22042 37 100.0 37 ..................................... ACTCTCGCTGTTGGTGGCCTGTTTGGGCTGCTGCGCG 22116 37 100.0 35 ..................................... TGGTGTGTGCAGGGTGACGGGCTGGGGGTGACGCT 22188 37 100.0 35 ..................................... TGGCCGGGTAGTGCGCGAAGGTCGCGCCGGTTCCC 22260 37 100.0 35 ..................................... AAGTTCATGCTGGCGAAGGCGCCCGACACCTGGGT 22332 37 100.0 33 ..................................... GTCCTCGACGCGCTTGGGGCCGACCGCGAGCGC 22402 37 100.0 34 ..................................... GGGCATCGGCACCTCTGAGGGGAGTGTGGGGGCG 22473 37 100.0 34 ..................................... AATAAGTCAGCAGCGCGCTGAGCTGCGCCCCTTG 22544 37 100.0 36 ..................................... AGGACGCTGGGCAGGCCACCTTCTACCGTGCTCCCA 22617 37 100.0 35 ..................................... GCAACAAGGCAGGAGCGAACCATGAGCCTCACCGC 22689 37 100.0 34 ..................................... GCTTTCTCTGCAGGTGACGGCGTACCCCGGCACG 22760 37 100.0 35 ..................................... TTGCCGATGTTGGTGCCGGACTTGCTGCGAGTGAC 22832 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 12 37 100.0 35 GTTGCAGCCGTCCTTCGGGGCGGCTGAGGATTGAAAC # Left flank : CCTTACCTGCACCGTTGAGGGCTGCATGATCGACCTTCTGATCACCTACGACGTTTCTACCGAGACTTCCGCCGGACGCAAACGCCTGCGCCGCGTCGCCAAAGTCTGTGTGGCGCACGGCCAGCGCGTGCAGAACAGCGTGTTCGAGGTCAGCGTCACCGACGTGCAGCTCCTCGCGCTGCGCGACAGACTGCTTCAGGAAATGGACCCGACCGAGGACAGTATCCGCATTTACCGCCTCCGCCAGCCGCGCGAGAAGTTCGTGGAGGCCTTCGGACGCGACCAGTACCGCGACCTCAGCGCGCCCCTCATCCTGTAAAGCCTGCGCGAACTCCCTGTGACAAACAACAGCGGGGGAGGTTCGCGCGCTCCAAAAGTCCGGCCAGGACGCGCCGCATGACAACGATAATGGGCGCCGGAAGCCGCCGCTTGCCGCCAGGAGCGAGGTTCGCGCAGAATACGAAATGGAACGCGGGCTGGAAGGCATTCAGTTCGTATCC # Right flank : CCATAATAGGTGTTACGGGGAAGGCATCCCAGACCGGAGCAGCCTCCAACAACCCTCCAGCTCCGGTGGCCGCAAGGGAGATCCGGGAATCAGGCTAGTATGCGATACTTGCATTTTATGTAGAAAGCGCATAAACTCCTCTTGGTATGAATGTGCTTGCCAGACGGACTCTGCTCAAATTTGCCGAGCAGTACCCTGAAGCCCGCGAAGCTCTCCTCGCCTGGGAAACCCTGGCGAGAAAAAAGAACTTCGCCTCGTTCGCGGAAGTGCAAGAAGCCTTCGCTACGGCCAGTTGGGTCGGCCCCGACTACGTGGTGTTCAACATCAAGGGCAACCACTTCCGCCTGATCACTACCGTGGATTTCACTTACAAGATGATCCGGGTCAAGGAGTTCATGAGGCACTCGGATTACGACAAGTGGAAGCCCTGAACCGAACTGAATGCCTGGCCCGATCGGCGGGCCACCCCCTCGGGGGAGGTGAACTGAATGTCTCTCAAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCGTCCTTCGGGGCGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.10,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA // Array 1 356040-356633 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHFV010000003.1 Deinococcus metallilatus strain DSM 105434 Ga0416734_03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 356040 37 100.0 33 ..................................... ACGCAGGGCAGCGGCCTGGACAGCAACGGCCTC 356110 37 100.0 34 ..................................... CACCACGTCGAAGGTGGGCAGGACGTGGTTCATG 356181 37 100.0 20 ..................................... GGCGAGGAACGCGAATGCGA Deletion [356238] 356238 37 97.3 36 .G................................... TGTTCCGGGTGGTGCTGGTGGGAGTATGACAGCGTG 356311 37 100.0 36 ..................................... GGCTTGCTTGAGACGCTGGGCATAGGCCCGCCCGAA 356384 37 100.0 33 ..................................... GACGATCTCGCGGACAGCCATGACCGGGCGGCG 356454 37 100.0 34 ..................................... CGCCGCCAATCTGAACGGCATCGGCAATCTGGCC 356525 37 100.0 35 ..................................... GGCACCGGCTGGGGCGAGGACCTGGCTGCCGCGCA 356597 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 9 37 99.7 33 GTTGCAGCCTACCTTCGGGTGGGCTGAGGATTGAAAC # Left flank : GCGCTGGCCGGTGCCCACGCCGCCGCCTTCAGGGTCGTTGCCGCTCTCGTAGGCCATCAGCTTGGTGCGTGTCGCCTTTTTCGGCCCCAGCAGGGCACTGGCGACCACCGCCAGGACGCCGATCCCCAGCGCGACCAGCAGCATGATCACGAAATTCGCGTACTCGATGGGAGTCTCCCTTCTGCCCTTGCCCCTCTCCCCATTCCCGCTCGTGAAAAAACGCACTAAGGGTTTGAAAAAAAGAGACGCGGACCTGACGAACCGAATCTGCAACCGACTTGTGGTACGCCACAGTTCTAGCACGAAAACACGTCTCAGGCGGTGCGCGAACCCGCTGTTACGTCAGAACCCCGTAGGGTTCGCGCTCGCCTGATCTGACGGTGCAGCACAGATAAGTTCACCTCCGGGCAGGGCTCGCGGGACGCTCCTCCCTTTCCGCCGAGAGGTTCGCGCTCTGCTACGCAAAAGTTGCTTCCTGGCCGCAAAAAGGCGACACTGGC # Right flank : CATTACCGTGCTCTGCGGCCCACTGCCGCACCTCTGCGTTGCAGCCTGCTTTCGGGGCTGCCCCCTTCCCTGCCTCAGTTCAGCAGTTCCACGAAGTCGTCGTCTTCGCTGTCCTGGGCGAGGGGCAGGGTGAAGATGAAGGTCGAGCCATGGCCGCGTTCGGACTCGGCCCAAATGTGGCCGCCGTGTTCCTCGACGGCCAGTTTGCAGAACGCCAGACCCATGCCGGTATCAAAGCGGCCGTGCAGGGTCAGGCGTGACTGCTCGAAGGCGGCAAACAGATTTGGAAGGTCATCGGCGGGGATGCCCTCACCGTCGTCGCGGACCGTGATCTGCGTTTCGTCCTCGGCCTGACGCACCTGAATCTGAATCAGGCCGCCGGTGGTGGTGTGTTTCAGGGCGTTGCTGATCAGGTTGGCGAAGATGCGGCGCAGGATGTCCGGGTCGGCGCGGGTAGGACTGAGGTTCGGGGCGACTTCCACACCGATGTGCCGGTCGCG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCTACCTTCGGGTGGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.00,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA // Array 1 1306-1851 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHFV010000005.1 Deinococcus metallilatus strain DSM 105434 Ga0416734_05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1306 37 97.3 35 .....................A............... GAGAGATGATCCTCGACGAGGCGCACCAGCTTCAC 1378 37 100.0 32 ..................................... TCTGGGGTATGAGCCTCAAGGCGTCCGAGGTG 1447 37 100.0 37 ..................................... TCGCATATCTCCAGCAGGCCGAGGAGCTGGCGCGGCT 1521 37 100.0 36 ..................................... CCCGGTGAGCGTGCTGTGGGAACTCGACCCGGTCCA 1594 37 97.3 40 ......................C.............. GTCAAGGGAAAGAACGTCTCCGGCCAGTACCGCGCCCTGT 1671 37 100.0 35 ..................................... GGCGTGGAGCCGTGGCCGGGGTCGAGGACGATGAT 1743 37 100.0 35 ..................................... GACCTGAACGCCCGCCAGCGCCTGTACCTGCTCGC 1815 37 94.6 0 G................T................... | ========== ====== ====== ====== ===================================== ======================================== ================== 8 37 98.7 36 CCTTCAACGACTTCCCCGATCGATAGGGGACTGAAAG # Left flank : TCCACGTTCACGCGGGGCTGGCCCTGTTCACCCGCGCCCACCACGTACTGCAAGGGATTGTTGCCGCCCTTCGTGACCACCAGTAGCACAGCGGCGGGCGTCACGTCGGTATAGTGCAGCGCCTGCTTCGCGCCGCCGCGCAGTTCCGCCAGAGCGCGAATCAAGGGGGCAATGCGCTGGGTGCGCGAACTCTGGCTGGAGGACGCATGGCAACTGCTCCAGCGGTACGGCCCGTGACCGCAAGAGGCGTGGCTGCCGTCAGGGTCCGGCGATTTGCGAGGTGTCCTGGTGGGCCTTTTCAGGGGAGGCCGCCTCTGAAGGCTCGCCCTGTCGGGGCTGGGCAGGCAAAGCCACGTCCTGCACGCACCGCAAACCGGCGAGTCCGCAGGTTCCCCTGGCTCTTGCGAACACCACCAGCGGGTAGAATGAATGCCGTCCTCCACAGCGAGGCGAGCCGCATGACAACTTTCACCCTCCCCGAAAAGAGCGAGAAATACGCG # Right flank : GTGGCGCCGGTTGCAGGTTCAGGGCCGGGAGACAGGCTTCAACGACTTCCGAGCGTTAACACCGTGATGGCCATTGTTCGGCGCGCCTGAGTGGCCCAATCTAGCGCCCCAGAAAACGGTGCACCTCGCCCAGGCCGGTGGGGCCCAGCAGCACCTCACCGCTGGGCCGATGAAGCAGCATAGGGGTAGCCCGGATACCGTACGCCTGGGCGAGGGCCTCGAACTCGGCCGGGCGCTGCTGGCGATGCACGACGTCAATCTGTTCCGTGAATTGCCCCTTCAGGGGGCCAGCCAGCATTCGCTCCAGGCGCTCACACTGGGGGCAGTGCTCCTGGGTCAGCAAGACGAAGGGGCGCTCAGCCATGCGGCACCCGCTTGGCCTCGCCGGGAAAGCCGCCCGCCCACAGGTCCGCGATATCCCCGTCCGTCAGGGGTTCCACACTGATCTTGGCGTAGCTGCTGCCCTTGGCGCTGAAGAAGTCATGGGTGGTGCCGCGCGC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCAACGACTTCCCCGATCGATAGGGGACTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.30,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 2 209807-208619 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHFV010000005.1 Deinococcus metallilatus strain DSM 105434 Ga0416734_05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 209806 29 100.0 32 ............................. CTCTCTGGTTTCGACATCGCGGGCATCAACGG 209745 29 100.0 32 ............................. CTGCTGACATCGGCGTGCATGTCCATGTAGTT 209684 29 96.6 32 ............................T TTGAGGTATTCAGGGAACGTGGTGGAGTTCCC 209623 29 100.0 32 ............................. GGGCCTGCAAACACGCGGGTGGACCAGCACAC 209562 29 100.0 32 ............................. ACCTGGAGCTGATACAGCCGGGCGCCGGGAGT 209501 29 100.0 32 ............................. CTTGCGCCCCTGCCCCCCGTGTTCCCCCTCCG 209440 29 100.0 32 ............................. GCGTTGTTCCTGGGAGCTTTGGGGCTGTCCCC 209379 29 100.0 32 ............................. GCCAAATAAAAAGCCCCCGCGCCGCCAGCCGA 209318 29 100.0 32 ............................. TCCGACCGGTGCGGCATGTCCCAGAGGCAGAC 209257 29 100.0 32 ............................. GGTTTGTAATTGCAGAGAGCTTGCAGGACGTG 209196 29 100.0 32 ............................. GGCCGCCACTGGCAACTGCTCCCCCAGGAACA 209135 29 100.0 32 ............................. TACTGACATGATTACAGAGGCTATCGTGGGTG 209074 29 100.0 32 ............................. TCTTGCCCTTCCGGTCCCCCATTTCCCAGTCC 209013 29 100.0 32 ............................. ATCGACCGGACGCGGCCCCAGAGGAAGTAGAA 208952 29 100.0 32 ............................. CCAGTCGTGCGCCACAGCCTGGGGGCGGTAGG 208891 29 100.0 32 ............................. GCCATCGGGGAACACGACCTCGCCCGCAGGCT 208830 29 100.0 32 ............................. GCCCGCAGCACGGCGGACCTCGCGGGCGGCGG 208769 29 100.0 32 ............................. CGTACCGCCACGGTAGCCCAGCCGCACGGCGT 208708 29 100.0 32 ............................. CCGCGTGCGATTCGCCACCTCGGTGTCCTCCT 208647 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 20 29 99.8 32 GTGTTCCCCACGTGCGTGGGGATGGACCG # Left flank : TCACCACCTCCTCGGCGGAGACGAACCGGACGCCGACGACCTCGCTCCGGGCGACCTCTGGGACCCGGAAGGCGACGTGCGCGGTGGGGTGAATCACGGATGATCGTCATGACGCTCGAAGCCGTGCCGCCCTCCCTGCGCGGCGAACTCAGCCGCTGGCTGCTGGAAGTGCAGCCGGGCGTCTATGTCGGCAACGCCTCCGCCCTGGTCCGTGACCTGCTGTGGGACAAGGTCGTGCAGCACGCCCGCACAGGTCGCTGCACCCAGCTCTACCGCGCGAACAACGAGCAGGGCTTTGCCGTCCGCCTGCACGGCGACCCGAAACGTCGCCTGGTCGAACTGGACGGCTTTCAACTCATTGCCGTCCGCAACGCCCGTCATGCAGAATTGGACCGGGAGTATGCCCCTCCCGAGGACGATGACAAATTGTGATGCGGATCCAGGGCTGAACAGGGGCCTTGGCAGGGGGTGAAGCGGGAGAAACATCGTGTTTCTAAAGT # Right flank : AAGCCATCCCGCAAGTGCTTGCCCATAAGTTCGACCCGAATCTCCCGCAGCACTGTCCTCGCCCACTCGGGTGCTGTCTCGAGGAACGCCCCCAGGGCCTGATGCAGACGCCTCAGGGCCTCCAGACCCTGCTCCAGTTCTGCGGCTGACCCGGGGAGCGGCATCTGCGGGTCAGCCCTGCTGCCTGCACCCAGGAGTTCGCTCATGGGCAAAGCAGCAGCAACCCGCTGGTCATCGTAGATAGGCGTGTACACCTTCACTCTGAAGCTGGCGTCGGCATGTCCCAGCCAGTCCGCCACGACCTTGGGCGGCACGCCCGGCGGCTCAGTAGATTGGCCGCCGGGCGCCGCTGCACCGGCTTCGCCTTGGGGAGGGTACGCAGCAGCGCCCGCAGGACACGTTCCGCCTCCTCGTGGGTCTTGCAGCTCACCGACCGGCGGCGCTGCTTCCCAGTGACGGGGTCCCGGTAGCTCGCCAGTCCCCGGGCACTGACGACGCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 223053-223997 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHFV010000005.1 Deinococcus metallilatus strain DSM 105434 Ga0416734_05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 223053 29 96.6 32 ............................T TTGCGTGTCCAGCACGGTCAGGCCGTCAAGGA 223114 29 100.0 32 ............................. CGAGGGAGGCTCCCTTGAAGCGTACCAAAAAC 223175 29 100.0 32 ............................. CAGGTTTCACCCGCCCGGTCCCCAGGAGCGAC 223236 29 100.0 32 ............................. CCCCGCTGCCCTATTTCCCCATTCATTAAGAC 223297 29 100.0 32 ............................. CCGCGCGTACTCGTCGGGGTAGGTGTCGGGGT 223358 29 100.0 32 ............................. TCCAGGTCAACGCGAACGGGCACGCTCAGGCC 223419 29 100.0 32 ............................. TCCCATATCGGTGTCCTTTGGCCCGGTGTTCG 223480 29 100.0 32 ............................. ACTGGAGTACGTCTCCCCCGCTTCCAACTGGG 223541 29 100.0 32 ............................. GGCGGCGCCCCCAGCGCCACGGCGGCATGGAT 223602 29 100.0 32 ............................. CTGTCGCCAGTTGCAATACCGCCACGGCATAC 223663 29 100.0 32 ............................. GCGCTCACAGGGCACCCCCTTCCGCCTGGGCC 223724 29 100.0 32 ............................. TGGGGCAATCCGCTTGACCAGGGAATTAATCC 223785 29 100.0 32 ............................. GCCAAGCCCGTCATCACCGCCGTGCGGGACGT 223846 29 100.0 32 ............................. TTGTCGCGCAGAACCTGGCCGTGAGCGCCGAC 223907 29 100.0 32 ............................. GATGCCTTGCAGGGCCGCGAGGACGCTGCCCA 223968 29 82.8 0 .....................CC.CG.T. | T [223993] ========== ====== ====== ====== ============================= ================================ ================== 16 29 98.7 32 GTGTTCCCCACAGGTGTGGGGATGAACCG # Left flank : GCGGACCCCACCCCGGAAGGCCCGCGCCACGGCACGCGGCTGGGCGAGGAGAACTTGCGGATCGTGCCGGTCCATTGCATCCAGCGCGGCCTGTTCCTGGATGAATGTGCGAACCACCCCGCACAAACCGTCACCCTCAGAAAAGACGACTGGGACACGGCCCGTGCGGTGTATGCCCGCAGCCTCCAGGTGTCCCGGCACGACCTCCTGCGCCACATGGGCGCGCACCACGACCGGCACGGCGTCAGGCTCGGCACGGCGCACGTCGGCTGGGCCGCCCATCCCCTCCTGCGCGACGTCCAACCGCTGGTGCTTGTGAATGGCGAGGCCACGCTGGGAAACACTCGCGTCCGCCTTGACCCGGAACTCGGCCTGACCTATGAGCGGCTAGACTGAGTCGGGGTCTGTCCCCCGCGCCGCATGAAAATGTAAGCCAATTCCAGACCGTGTGGAGGGACTTGCGGCAGGGTGAGAAGCGGGCGACCTTGTGTTTCTGAAGT # Right flank : GGTCGCCTTCGATCCGTGGAAGCCGCGTGACCCGGTGGAGCGCTTCAACCTGGCACAGGAGCAGGTAGGCCGTCACTGCCCGCTCGGCATGACTCGGCAGCCAACTGCGCCCGCGTGTACCCCTGTTCGAGCCGTGCCCTGACCCAGGCCTCGTACCATTACAGCAGCCCGTGCCTGAGCAGCTCCTCTTCCGTCCAAACGTACCCTTGAGGCTCGCCCTGCCCCGTCATCCTGGTCGGTCCTCTGCGATATCGGTGAGGTCCATCGCCCGCAGCTCCGGAGCGAGGTACGCCGTCACGCCCACCACCAGCAGGGTGACGATGCCGCCCAGCCACACGCTGCGCGCGGTGCCCAGCCAGCTCGCGGCCAGCCCGCTCTCGAAGGCGCCCAGTTCGTTGCTGGCCCCGATGAACATGCTGCTCACCGCGCTCACCCGCCCGCGCATGTGGTCGGGCGCCTTCAGCCGCAGCGTCGCCTTGCGCACCACCATGCTGATGCCG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACAGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //