Array 1 351-1245 **** Predicted by CRISPRDetect 2.4 *** >NZ_BORC01000017.1 Bacillus siralis strain J27TS8 sequence17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 351 32 100.0 34 ................................ GAGAATTGGGAAGAACGTTCTTTCGATATTAAGC 417 32 100.0 35 ................................ GTATATCGACGTACCTCCGTAATTTGTCGAATGCT 484 32 100.0 35 ................................ CGATAAAGGTCACGCACGATGACACATCAGTAAAT 551 32 100.0 36 ................................ TCCCAGTGGAGTGTGAAAAAATAGTTAGGTACTAAC 619 32 100.0 35 ................................ CTGCTATGGTACGTATGCTCTCTATATCGAATCCG 686 32 100.0 35 ................................ TTTCTAACGATTGTTGGTGAGCCAACGCTGCTCTA 753 32 100.0 34 ................................ CGCGAAGTTCCGTTGGATATTGCGCTTGTTTATG 819 32 100.0 33 ................................ CGTAACGGAGTTAACGCAGCATGGGCGGGCATT 884 32 100.0 34 ................................ CTCTCTTGATGTATCTCTTTACAACGTAGTGAAC 950 32 100.0 35 ................................ ACACCGTTAACCCCACAAGAAGTAGACGTATACGA 1017 32 100.0 32 ................................ GTACAAGTCCCAATTTTTAATTTCTATATTTC 1081 32 100.0 34 ................................ CGGAGGGTGCGATCGGTTAATCCTGTCTTCACGC 1147 32 100.0 35 ................................ ATAATCTATTTGAGCATTAAGTTTTAAACCAGAAT 1214 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 14 32 100.0 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : CTCTAATTGCTTATTACGTTTCCTAAGTTCCTGCAACTCTTTCTGTTCGGAGCTGAGATTATCCTTTTCTTTAAAGGATCCGGATGACTTACTTTGATTAATCCACTTATCGAGTGAAGAAGGGGTTAATTCATATTCACGAATAATGTCTTTACGAGGCTTTCCATTCTGGTATAGCTGCACGATCTGTTGCTTAAATTCTTCAGTAAACGTTCGACGTACTTTTTTTGTCATGTAGATTCTCCTTATGACGAATTCGTATAGTTCATTCTACTTGACCTTAAAATTTCTGTCTAACTAAGTGTAGCCGATCCAAAGTGTAATTTTACTTTTTTCGTTTAAAAATCGCTG # Right flank : TTGTGACGGTCTACCTAAAGACGAAATGGAAATGACTGTCGAACCCTACATAAACTTCACACCAAAGGAACTATAAAATAACACAGGAGATGACAATGATTGTAGCGAAGATAGTAATATAATAAAATATGACTTTCCAGGTGGTGTGGATTGTGAAAAAAATTTTGACATCAAAGAAGGTTGTATTTGGGGGCTTGTTGTTCTTGCTTTTTGGCATATGGGTTTTTAGCGAAATTAGCAGTCGTTTTTCCATAAAAGGGCAAGAGCCAACTGATGTAGGCTATGTTGTTTTTCACAATGGTACGAAATATTTCGTTAAAGGAGAAAATATTACAGCTTCTGACTTGGAAAATTTTTCTGATGAAGATGTTACGATGTTTTCAAAAAAGTTTGAGGAAATAGCGATATTACTAGATGATGGCATGAAACTTTTGGGGACAGGAATTAAAAGTGGTGATCAGGTCGCTATTTGGTATGAAGAAGTCCTTGAATCGTACCCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 32780-32416 **** Predicted by CRISPRDetect 2.4 *** >NZ_BORC01000008.1 Bacillus siralis strain J27TS8 sequence08, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 32779 32 100.0 34 ................................ GTCAATGACTGTCAAGTAAGGCGAAGGTGTTTTT 32713 32 100.0 35 ................................ CATCGAATCTTCCTGCTCCGTTACTTTTAATACGT 32646 32 100.0 33 ................................ CTTTTAATAGTATTAAAGAGCCCACTTAAAGCA 32581 32 100.0 35 ................................ CATCTATTAGAAAGCACGGAATGTATGCAACCCCA 32514 32 100.0 34 ................................ TTTGTTTGTTTATTTAGTTCTCCAGGATACTCAA 32448 32 90.6 0 .............C.........A......T. | A [32421] ========== ====== ====== ====== ================================ =================================== ================== 6 32 98.4 34 GTCACACTCTATATGAGTGTGTGGATTGAAAT # Left flank : CATGAATTCTAAATGCGAGCAAGCAAAGTTAAGGTTGCAATTATAACAAACGAAAGTGGAATAGAGAATGCCTCTGCTATTCGAAGGTAATCTAAACAGAATCTCGTCTGCTCAAAAACTCGGCATATTCTAGTGTAGATTCAATTCCTTACTTATAATATAACCGCTACCTGAAAACTTTTAAATTATCTGATATAATGGAAAAAATATTATATATTTAGCTTTTGAGACGAGTTTAGCATTTGGTATTCTCAATCCTAATTTCTTTATTAATAACAGTTACATAAAAATTTTTAATTAAAACACCTATAATTTAAACGGTAATTATTCAGTGCGAATGTGAAGCGCACATGATTTTCCTAGGAGATTCGCACCTTGAAAATAGCAGCTATTTCTTTTAACCGCATGGTTTTATTCCATTTTTTACCTATATAACCACAAAAATAGCATTTTCCATACGACGATAAGTGTAATTTTACTTTTTTTGTTTAAAAATCGCT # Right flank : CTTCCTGCAAAAAAAGATAAACGGGTGTCCAATATTTTTTGGACACCCGCTTATCTTTTTAATTTAATTGCATGGTGGTTATACAAGTCCCATCATTCTCAAAAGTGGATAGCTCGGATTCGACTGTCTTGCCATCGTAAGAAATCGTAACAGTGTACGTTTTTTCCCGTGGAAGCCATAAATCAAAAAATCCATTTGGAAGGGACGTTATTTTTTCATCTACCATCACTTTTCCATCTTCGTCTTCAATATAGACATCAAATTCTTTTTCGACCAGCTCTCCTTGACAACCTGTCAAGCTATGATTTGTACAAGGATGCGTTTCATTGATGTATGGAGCGATTGATACAAAAAATTCCTCTTCCGGCAGCTCATACACTGTCTCTTCCTCATTTTCTTCATTCGTAACAATTAATTGTGTAGCAGTAATCGAGGCTGTTTCACCTTCAACACTTCCAGTACTGTACTCATTGACCAATTTTTTGATGTCTACCGAATCG # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACTCTATATGAGTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.50%AT] # Reference repeat match prediction: R [matched GTCTCACTCTATTTGAGTGAGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 137748-138314 **** Predicted by CRISPRDetect 2.4 *** >NZ_BORC01000008.1 Bacillus siralis strain J27TS8 sequence08, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 137748 32 100.0 36 ................................ AGCCAATGCTAACTCTCGTCTTGCAGCCTGTATAGC 137816 32 100.0 37 ................................ ATATTTTAAGTAATTTGTTGTAAATATGATGACAATT 137885 32 100.0 33 ................................ GTTTGAAAAATCGTTTGGTAATGCTGAATTTGC 137950 32 100.0 34 ................................ TTGCTGTTCTAATGAAGTCAATTCTTCCATTTCT 138016 32 100.0 33 ................................ CAATAATCAAGAATTATTAGAGTGGACAACTGC 138081 32 100.0 34 ................................ CAATATTATACGGCGGGTCAATTATGATTAAATC 138147 32 100.0 35 ................................ CGCAATAAAAAAGCCCGCCGATTAGGGCGAGCCGT 138214 32 100.0 37 ................................ ATATCAGGATCTAAAGTATTGTCTTTAGCTTCGGGTG 138283 32 96.9 0 ............A................... | ========== ====== ====== ====== ================================ ===================================== ================== 9 32 99.7 35 GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Left flank : AAAGCACAAGTCATACTTGAACAGTTAAGGAAAATCTAGTAAAAGAGAGAATCTTGGCGACAAAAAGGTATTGGTGCAAGTTTGCTAATCGTATTCTTGAGTTTGGAATATTTAAGTTGAAATGTAAGATTTTTGCTATAATAAGAGAAGGGTTGCATAATCTCATTGCTGCAATTCAGAGGAGCAGTCAGTACAGCATGGAAAAGTGTAAAATTCAATGCTGTGCAGTTTTTGTTCTCACATTTGTTAATAAAGAAATTCTCTGAAAATATAATATTGATAATTTCACAAAATAAAGTTGGGAAGCTCTCTCACCACATTATTTTTTTAGTGCGAATGTGAAGCGCACATGATTTCCCTGGGGGATTCGCACCTCGAATAAGGGTGTAATCCTTCTTGTTTTGAATTATTTTTTATAAAAATTTCTTTGGAAAACAAGAAAAATAGCATTTTTCTTAGCTAAGAAAGTGTAAATTTACTTTTTTCGTTTAAAAATCGCT # Right flank : TAGTTAAGATCAGCTAATGACATTGGAAACTCATAAAGTTGGTATGTCAACACTAAACTAGACAACTTTTTTAAGATGTTCAAGTTTGTAATCAATCGGACTTACATAACCAAGTGTCCCATGAATTCGTATGTGATTGAACCAGTGAACATAGTCATGTAATTCCCTTGTTAATTCTTCTAAACTATCAAAATGTTTATCTTTCACAAACTCTGTTTTGATGATTTTAAACGTTTTTTCAGCCACCGCATTGTCATACGGGGCAGCCCTTCATGCTTAAAGATCGTTGAATATGAAACGTCTCTAAAGCATCGTCAATCAGCTTGTTTTTAAACTCATTTTCACGATCCGTATGGAAAAGCTTTATTTTATGTAGATCAACCTTAATGGAGGCGAATGCACGATAAACCAGTAAGGCATCTTTGTTTGGGCGTGTACTGAAGCCTACGATTTCACAATTAAAGAGATCAACAAATACACATACGTACTGCCATTTTTTA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.80,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 146863-148685 **** Predicted by CRISPRDetect 2.4 *** >NZ_BORC01000008.1 Bacillus siralis strain J27TS8 sequence08, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 146863 32 100.0 33 ................................ TGTTTAGAAAAATAAAAGGAGGATAAGAATGCT 146928 32 100.0 33 ................................ ATCTGATTAGGATTGTTGCTCATACGGTCATCT 146993 32 100.0 35 ................................ TTACAGCTATCACTTTTGGTGAAAAACCTAACCCT 147060 32 100.0 34 ................................ AAGCAATAGAAAACTTAATAGAATCAATCGAACC 147126 32 100.0 37 ................................ TCTTTTCGTAATAGGCTTGTTCTATTTCCTCCCATGT 147195 32 100.0 34 ................................ ATCTAGCCAAAGGACTGTCATCACTATGTGCAGT 147261 32 100.0 33 ................................ AACAAAATTCATTGACGACCAACTACTAAATTT 147326 32 100.0 35 ................................ ACACTATCATACTAACAAGGATTAACTGCACTAAC 147393 32 100.0 35 ................................ ACGCCATCCCATTTAAGACTGTTAAGATAATCTAC 147460 32 100.0 36 ................................ AAGACATTGCGAAGGCTCAAAAGGAAAGAGAAAAGC 147528 32 100.0 36 ................................ ACACTCGATTGATGCAGTATCGTTGATAACTGTGTG 147596 32 100.0 35 ................................ CTTTTAGTATACCTTGGGATGTTTATAGGGCTTTT 147663 32 100.0 34 ................................ ACTAGTCAAGGTGTATTTATATTGAGGGATCGAT 147729 32 100.0 33 ................................ ATCTATTAAAATACAGATCAACATAATTTCGCA 147794 32 100.0 36 ................................ CGCACCAGGTCGTAGTTGCTAACCGTAGAATTTACG 147862 32 100.0 32 ................................ CGCATACGTAACTGTACTTGGTAGTCTAATTC 147926 32 100.0 35 ................................ TGAGATAGCGCATTTTGAAGCCTTAATGGGAGATA 147993 32 100.0 34 ................................ TGATAACGCACCCGACCGAATCGCCGCCACAATT 148059 32 100.0 36 ................................ GAATATATCTTTTACAACGTCACTAAAAGAAGATAA 148127 32 96.9 33 .......T........................ CAAAAGGCGACGGCTTTCCTTGATGAACGTATT 148192 32 100.0 35 ................................ CACCTGATGCCCTCCTAACCTAGTAAACTTTTTCC 148259 32 100.0 33 ................................ ATTATAAACACTACAGTAAACTTCTCCATTGTC 148324 32 100.0 35 ................................ TTCATTTTCAATGTATTCGATCACAGGTACATCCC 148391 32 100.0 34 ................................ TAAATCAACTAAATACCAAATTGGCTGTGAAAAC 148457 32 100.0 33 ................................ GAGCCATGGTGTTACTATAGATGATTTATCTAT 148522 32 100.0 34 ................................ TGGAATAGCATCGCCATCTTTCTCCATTCCATAT 148588 32 100.0 35 ................................ ACCTCGGTCAAATGGATTTTGAATTTCGAATTCAT 148655 31 87.5 0 ......-...AC........A........... | ========== ====== ====== ====== ================================ ===================================== ================== 28 32 99.4 34 GTCGCACCTTGTATAGGTGCGTGGATTGAAAT # Left flank : TTATCTTGATAGATAGCAAGGATATTATAGTGGACTATAAATAAATTTAGGCTTTTATTCTTTTTAACTGTTGCTATGTAGGCATGTGGGAGGCGTTCTTTCTTAAATGAAGTAAATATAAAGCTCTGGATCACTATTGAAGCGATGCTATGTAGTTGAGACACACTCTATATGAGTTTTTGGGTTGAAATTAAGACTAAGATCAGAGGAAGGCTCGAAAGTAAAAACAGTACATATATGTTTGCTCTTATTAAAAAATAATGTAGGCATTTTTGCTGAAATAAGAGAAGTGTTTTAGATTTAAACTCTTGAAATTTATGTTAAAATTTTTAGTGCGAATGTGAAGCGCACATGATTTCCCTAGGGGATTCGCACCTTAAAATAGGGCTGAAATCTTCTCCTTCTTGTATTTTTTTACAAATATTTGTTGGAAAACAACAAAAATAGCATTTTCACAACATAAAAAAGTGTAATTTTACTTTTTTTGTTTAAAAATCGCT # Right flank : TTCGCTATGGTCGGCGATTACATTTTCCATTGTTTGTAACGCTCTACATGAGTGCATAGTTCGGAACAGCTTTAAGAAGATATCTAAGAAGCGCTATCATCGTACTTTATATTTTTGTTTCCTAAAAAATGTGAAAGATTTGCTATAATTAGTGAATAGAGATTTGGATGAGTGTGTTAAGCAAATACAATATCAATAAGTGTCCAAAAGAGAATCTCATGTGCAAAGCAATTTTATAATTGCAATAAATAATTAGTGCGAATGTGAAGCACACATGACTTTCCTAGGGGATTCGCACCTTAAAATAAGGTTGAAATCTTCTCCTTCTTGTATTTTTTTACAAATATTTATTAGAAAATAACAAAAATAGCACTTTTAAGACGGGAAAAAGTGTAATTTTACTTTTTTCGTTTAAAAATCGCTGTCGCACTCTACATGAGTGTGTGGATTGAAATATGCCTTTATATTGACCAGTCCGTAAAGCTAATTGTCGCACTCTA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTGTATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 149108-150991 **** Predicted by CRISPRDetect 2.4 *** >NZ_BORC01000008.1 Bacillus siralis strain J27TS8 sequence08, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 149108 32 100.0 34 ................................ ATGCCTTTATATTGACCAGTCCGTAAAGCTAATT 149174 32 100.0 34 ................................ ATCCCTTACCATATAATTACACATGTTGGTAATT 149240 32 100.0 33 ................................ CAACCGGAACACTAGTATACCAATACAATGAAA 149305 32 100.0 34 ................................ CGTATGGCGGCGGGCTTAACACAACAAGAGCTTG 149371 32 100.0 36 ................................ AGCGAGTTCGGGGTAAAAACTTTAGACCTTGTTGTT 149439 32 100.0 35 ................................ AAAGGACATAACAATTATACGTTATGTCCTTTTTT 149506 32 100.0 34 ................................ TTTGGCCAGAAAACTCGGGAGCGGTGAAAATAAA 149572 32 100.0 35 ................................ ACGATAATAATTTAGCAGAGGTTTTAGCGGATTTA 149639 32 100.0 36 ................................ TGCCACCAAGTGTGGCGGTAGAGTACCGATTACACA 149707 32 100.0 36 ................................ ATCTGCTTTATCTTTAAGCTTTTCGAGTTTTCGAGC 149775 32 100.0 33 ................................ GCTGCGAGGATACGCCATTATTCGCCAGCCTCC 149840 32 100.0 35 ................................ AAATATTGATTCAAAAGTACGTGATGTTACAAATT 149907 32 100.0 34 ................................ ATTCTCGACGCTGCCGATACTCGACGAAATCCTC 149973 32 100.0 35 ................................ TCAGGACGCTCTTCAGATGGAGCATGTTATTCCTT 150040 32 100.0 34 ................................ CGAGTAACTTGCCGATTGAGCCGCCCTGTTTCGC 150106 32 100.0 32 ................................ ATCCGGTTGAGGAAGAAATTACACCGCAAGTA 150170 32 100.0 34 ................................ AATTCAGTGGATGAAGCTGTTCAGTTCCTAAAAA 150236 32 100.0 34 ................................ TTCAATCCTGCTTTGGGGCCTTTAGTTAATAAAT 150302 32 100.0 35 ................................ TGTAAATTGTATTATCTGATAATTAACAGCTATTA 150369 32 100.0 34 ................................ AGTTCTGCATCAAAATGTGGCTGATTGTTTGTGT 150435 32 100.0 34 ................................ TTCGTGAGCTTACCATGTTAACACCCGATATTTA 150501 32 100.0 34 ................................ TTTTTGAGTCATATTATTTTTGTGCAAATGGTAT 150567 32 100.0 33 ................................ CACCGTAAGCACCTCCATTTTATTTCTGTATGT 150632 32 100.0 34 ................................ TTGCCCGTGGTGGTCGCTGAAATCCTCCGACAAG 150698 32 100.0 34 ................................ AGCAAAATAACGTTCACTAGCGTTTGCATTATGC 150764 32 100.0 33 ................................ ATAAGTCAGGGAGAGCAACTGAATTAGAATCCA 150829 32 100.0 33 ................................ AAAAGTCCGCAGGGAAACCTATGTTGGCTCCTG 150894 32 81.2 34 .......CT..T..AG...C............ CGTTATGTAGCAAGACGTAGGTAAATCATTTTAA 150960 32 96.9 0 ...................C............ | ========== ====== ====== ====== ================================ ==================================== ================== 29 32 99.2 34 GTCGCACTCTACATGAGTGTGTGGATTGAAAT # Left flank : GTGGATTGAAATACCTCGGTCAAATGGATTTTGAATTTCGAATTCATGTCGCACTTACATAGGTGCATGGATTGAAATTCGCTATGGTCGGCGATTACATTTTCCATTGTTTGTAACGCTCTACATGAGTGCATAGTTCGGAACAGCTTTAAGAAGATATCTAAGAAGCGCTATCATCGTACTTTATATTTTTGTTTCCTAAAAAATGTGAAAGATTTGCTATAATTAGTGAATAGAGATTTGGATGAGTGTGTTAAGCAAATACAATATCAATAAGTGTCCAAAAGAGAATCTCATGTGCAAAGCAATTTTATAATTGCAATAAATAATTAGTGCGAATGTGAAGCACACATGACTTTCCTAGGGGATTCGCACCTTAAAATAAGGTTGAAATCTTCTCCTTCTTGTATTTTTTTACAAATATTTATTAGAAAATAACAAAAATAGCACTTTTAAGACGGGAAAAAGTGTAATTTTACTTTTTTCGTTTAAAAATCGCT # Right flank : TTCCCGTTTGATGTTCGGAGCGATTGCGAAGGGGAACGGCTCTCACTCTGTCACTACCCTATTTGGAGTATGTGGAGCAAAGTTTTCACATAAAGATGTATCGGAGAAATAAGTGTTATGTGACAAATTAAAATCTCATCAATGAAATTAAAAACCATTCAACATTAAATTATAAATGTCATAATTTGTTTGGAATTATTAGAGAATAATGTAAAAATTTCGCTATAATGAAGAGGTGATGGTTGTAAAAATATGGAGGTGTACCATGCAGTATATTGCTCATATTCGTGAAAGTGATAGAGAAATTCAAACTGTGGAAGAACACTTGTTAGAAGTAAAGGGATTGGCAGAATCCTATGGAGAAAAAATAGGCGTCAAGCATATCGCTGGTTTGGCAGGGATGCTCCATGATTTTGGAAAGTTCACAAATGAGTTTCGGACTTATATTCTAGAAGCAGTAAATAATCCTGAAGCACCGCCAAAACGGGGGAGTGTAGATC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //