Array 1 8997-9392 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JQPA01000237.1 Leptospira interrogans strain J9 Contig237, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	====================================	=====================================	==================
      8997	    36	 100.0	    37	....................................	CAGGACTTGTTCCGCTTCCAGTTATCCATTCAAGAAA	
      9070	    36	 100.0	    36	....................................	TCTCATTGAATATTAAAAAAATTTAATTCGATTAGG 	
      9142	    36	 100.0	    35	....................................	AATCGAAAGGAATTCGAAGCATTTGCAAAAGCAGT  	
      9213	    36	 100.0	    36	....................................	GACGATACGTCCGCATCCGCAAGACTTTTTGACCGT 	
      9285	    36	 100.0	    35	....................................	ATGTCGGAGTTCCCCACATCCGGAAGCGAATCTGG  	
      9356	    36	  91.7	     0	..............................T..A.T	|                                    	G [9383]
==========	======	======	======	====================================	=====================================	==================
         6	    36	  98.6	    36	CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC	                                     	       

# Left flank :   AATTGGCAAAAGTCACCGAAGAAGAAGACAATATATTTTATCTGACTCTTTGCACCAAGTGTGCTTCGGGCACCCATACCCAAGAAAAAAAATCCGCGTGGCCAGAAGCTCCAAAAACATTAAAAATTCTATAATTCAAGTATCTCTTCAGGGCATAGACATAATTCTACTTAAAAAGCAAAACTAAATCTTTGAATCTATATTTAATTCCAAGACATATCCAATCTTTACTCGGATTCAGAAATAGACCCTATCTAATTGATTGCCCAACGCTCGTTTTTCTTTCTTGTGAAAATTCCAGCTAAATTTATAATCGGTGACGAGCTTAAACATACTTGAATCTTAATATTTGAAACAAAATGATCCTTGGAAACAAAATATGCACTTCTGAAAAAACCGAACATGAAAAATAACGATAAAAAACGATATACTTGTTCTCCTCCTTTGAAAACACTCATATCCACAATTTATGCTTATAAAAGCCATTTAAATAAAATGCT
# Right flank :  GAAGAGAAGATTTGTTTTGATCGCAATTGCTCCGTACAAAGGGCACAAACGGATAAAATGTAGGA

# Questionable array : NO	 Score: 3.19
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.80,-4.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.05,0   Confidence: HIGH] 

# Array family : NA
//