Array 1 38973-40457 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMXO01000003.1 Streptococcus salivarius strain BIOML-A31 scaffold3_size182918, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 38973 36 100.0 30 .................................... TCATGTTTTCTGAGGGCGACGCGAACACCG 39039 36 100.0 30 .................................... AGTGAAGCTGGGTGGAAAGAGAACCCTCGG 39105 36 100.0 30 .................................... GGGATGTCATTCTCTACTACCAGAACAGCT 39171 36 100.0 30 .................................... ATAAAATTGACAGTGAGGGTAACTCAACAA 39237 36 100.0 30 .................................... TTCAAGATTCTCGTGGGATTTGGTCCGATT 39303 36 100.0 30 .................................... AGCACCAAGCACACAGCTATCTTCTGATAT 39369 36 100.0 30 .................................... AGTCGAGAAGCTCAAGAGCGTCTTTAGTTT 39435 36 100.0 30 .................................... CTGACATGCGTGAATTCTTTAAAGAGTATC 39501 36 100.0 30 .................................... TTCAACAAGCATTGCCAGCGATTGGGTATG 39567 36 100.0 30 .................................... ATAGCGTCAACATCGCCATCAAACACTTTA 39633 36 100.0 30 .................................... CAGACAGTGCTGACCCTAAACTTCCTACTC 39699 36 100.0 30 .................................... CAAAGCGTATCAATGTCGTCATTTAGTTGT 39765 36 100.0 30 .................................... AAGCATCTACTCCTTTTAGTCGTCAACACG 39831 36 100.0 30 .................................... TCTTTCAAGATAATAGAGTTTTTAGAAACA 39897 36 100.0 28 .................................... CGAGCGCCTGCGAATGTCACTTGTTTCA 39961 36 100.0 29 .................................... GTATTTGAATACTGTAAATTATCACAGTT 40026 36 100.0 30 .................................... TGCAAGCGGTGGCAAACATCTATTCTACTT 40092 36 100.0 30 .................................... GACACAGCAGTGTTCTTCTTTTACTTTATC 40158 36 100.0 30 .................................... GTGAAGTGTTTGATAACCCTATGTTTGAAG 40224 36 100.0 30 .................................... ACGACCGTACTTTCGAGCGTGCGTGGGTTC 40290 36 100.0 30 .................................... AAATACCGATAAGACAATCGTTTTGCTCAC 40356 36 100.0 30 .................................... GTTTTGGTATGGTTAATGCTTTTCTTTTAG 40422 36 88.9 0 .............................A.C..GG | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.5 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TTGATAGTTTTATTTCAGAGAAATCTTATGATAGTTTTTATAAGCAAATTGGTCAGCTAGTCAAAAAGTATCCAAACCTAACCTTTATTTTGTTTCCGAGTGACCAAGGCTATTTAAAGATTGATGAGGAAAGTAGTAGGTTCGTCAATATTTTATCTGATCAGGTGGAGCATTTGTATGATATTGAGTTTATGTATGAAAGTGTAGCGAAATATTATCCAAGTAATAATTTTCCAACGAGAGAGGATTTTAGGATATCCTTAGAGACCGTAACACCTTATTTATTGACAAAAATGCTGAGACAACCTAGTCTCACACTTGTTGATTCTGTAATTTTGAATATTCTAAATCAGCTGTTTCAATTTAATTACCGTATAAGATATTCACAAACTCCTGATGAGGAGTTATTGCATAGATATTTAGAAAGTAAGAATTGACAAGGACAGTTATTGATTCTATAATCACTATGTGGGTATAAAAACGTCAAAATTTCATTTGAG # Right flank : GTTGATTGATTCAACTTAAAAAAGCCAGTTCAACTGAACTTGGCTTTTTAAAATACGCGATAAACATAAGGGTTGTCAGGTTGACCAACCTCTTTGACCTCAGTCAAATTGAGGATAGGCAGGCTCTGTTTGAGATTTTGATAGTAATCCACAGTGATGGTACCAGTGACTTTTACCCAGGTATTATCCTTGAAGGTTTGGTCACTTCCTGTCGTCGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATCCCAAAACGGAAGATGAACTGATAACCCTTGGTTTGTGGGTCATTGTAAACAAAACCGGTATAGGTGACCTTCTTGCCTACGAAATCGTTAGGATAGAGGTAAATGAGCTCCATGACTTCCATGTAATTTTCTGTGGTAATCTGGATGGTCTCACGTCCCCTGTACTTGGTGAGCTCTCTGGTCATTTCCTTCTCATAAGCTGAGGAGGTGAAGTAGGAGCTGGTGTCTGGCTTTAAGTACTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //