Array 1 69245-67757 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALXO01000023.1 Neisseria meningitidis NM255 NM255.contig.22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 69244 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 69178 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 69112 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 69046 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 68980 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 68914 36 100.0 30 .................................... CGACAACAAAGCCGTCTATGACCTGACCGA 68848 36 100.0 30 .................................... CACCCTGATATTCCGCAACTCGATATACTG 68782 36 100.0 30 .................................... TTGGGAGGTGGAAAACCGAATCCTGCACGA 68716 36 100.0 30 .................................... AAGCAAATCATTTTCATAGTCAGCAGCTTC 68650 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 68584 36 100.0 30 .................................... CTCTTCATTGAAGAAGTTATAAGCCTTTGT 68518 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 68452 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 68386 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 68320 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 68254 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 68188 36 100.0 30 .................................... TAGCAAACAAGGAATATTCAAAGTCCTTTA 68122 36 100.0 30 .................................... TGAAAAACATATCTCTTTCTCCGCCCGCCA 68056 36 100.0 30 .................................... CAACTACGTTGCCTCTGCTTTTGCTGCTAC 67990 36 100.0 30 .................................... TGTAAATGAGGTTATTGAAGATGCAAAAAG 67924 36 100.0 30 .................................... TTTTCCAAAGCGTAAAATCACATTCGGGGC 67858 36 100.0 30 .................................... GTGATGATGTTTGTCGATTTTTGGTTTTTG 67792 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.6 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : TAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCT # Right flank : CAGCACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //