Array 1 238358-238921 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUTD01000012.1 Levilactobacillus brevis EW 136.LBLWJ.1_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 238358 36 100.0 30 .................................... AAGGGCTGGCTGGATGTTACTAAGTTGCAT 238424 36 100.0 30 .................................... TAACCGAGGCCGAAATTTCGGATGAATTGT 238490 36 100.0 30 .................................... AAGCACTATCGGAACCTTCGCCCCTAAGAG 238556 36 100.0 30 .................................... TAAAGCCGGTATTAAGCTTCGGCGCAGTTC 238622 36 100.0 30 .................................... AAAAGGTGAATTTTTAGGCGCTCAGGGGTA 238688 36 100.0 30 .................................... GATAGATGTTGATGATTTGCCGGAAATTTT 238754 36 100.0 30 .................................... GCCAGCCGGGACAGTCTCGGTTGCTCAGCT 238820 36 100.0 30 .................................... TAGGCAAGCCATTCATTGCGGTGGTCGCCA 238886 36 91.7 0 ...........................A.C.....T | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 99.1 30 GCTTTAGAATCTTGGTAAATCAATAGGGTTAAGAAC # Left flank : AAACGTGGATTTAAATGCGTTATTTCAACGAAAACTGCAAACGAGGTTGTTGAAAGTCTTAGCTGATGATCAAACGGTGGGCTTAGTGGATGGGCTGCAATCATTGCTATCTCAACTATTAGCGGATAGTTACTTGATGGATGTTCCATTGGAGTTGCCAGAGACACCAGAACTAGCAAAGCTGATAAAATTTAGTGGTATTCAACTAGTACCTGATTTAAGAGATGACGTATATGGTATACTAGAGACACTAGTTAAGACGTTGATAGAACTGAATGATCATCGAATGGTGGTTTTGACCAATGTCGGCCATTATCTTCAGGTCGGCCAACTTCAATCGTTGGTAAGATTTATGGCAAATATTGATCTACCAATTCTTCTAATTGAATTTTCATCAACCAAGCAATCAGACTATTTCAGAAATTGTGACTATCACTACATCGACAGCGATTTTGTGTTGTGGTAAATTCTCAAGGTGAGATAATGGTGTGAAGATGTCG # Right flank : TACCCACTAGCAATGCTGCTAGGTGCTATGGTGTCTTACGATTTTGATAAAATGGCTCATTGATAAGAGCGAGATAACTTCTTTGAAGATATTAAATGACCTTGTAAAAAATGGTCTATAGATTTGTCAATTAGCACCAGTGGGCGTAAACATGAGAGTTCAATTCAACTTGCGAATTGAACTCTTTTTGTTAGCAAACGAATTATCACTAGCTTTGACAGCGAGGTACTTCAGTTAACCTAAATAATAACGGCAGTTTAACCACCAGACTATAAAAAATTAGTAACTTAACAAGACGCGGCATAACTTGAGCACCCGCACCCGCCACCGCTGATAATGCTCGCCTTTTATCTGATCTCACGTATCCCTAAATCTGTATCATCTCAATCCAATCAACCAGCGTTTAGCAGTCCAAGTGAGTTAGCTGGGCCAACAAAGTGAGGGGCCTCACTCATGTTTAGCCAATCGCACCGCGTATGATAGAGACGATAGCTAGAATT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAATCTTGGTAAATCAATAGGGTTAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 395716-395565 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUTD01000010.1 Levilactobacillus brevis EW 136.LBLWJ.1_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 395715 29 96.6 32 ............................C ATGACAAGTGTTAGCACATTGATTGTTTGGCG 395654 29 100.0 32 ............................. AAGTCAGTGCTTAAGCCTATCCATTATGCAGC 395593 29 82.8 0 .............A....A......A.GG | ========== ====== ====== ====== ============================= ================================ ================== 3 29 93.1 32 GTATTCCCCACATGTGTGGGGGTGATCCT # Left flank : ATGATTTTAATGTGATGGGAGCGGCCTTTTGCCAAGCCCATCCGGAGCAGGTCGTCCAACAGCCGCTGGGGCAGCACCATCAGGCCAGGGCGATAGGGATGCGGACGCTGGTCGACTTTGCGCGCGAGTATTATCGAGAAAAAGATCGACGCGAGATGAGCTAAAAAGTACAAGATATAAAAGCGTAGTTGTTAGCCGCGGTGAACGGAGTAGCGGCTACGTTTTATTGTATTATATAGTCTTCTATCCTTTGATTGTATCAAAAGGTAGTCACGATACTTTGGAACAGGCTAGTGATTTGGCGGCCTGGCTACGTAGATTAAGCACCTGGATCGTTACTAGCAATCTAAGTCGAAATTACTTACAAAAGTAAGGCCACAAATTCCAGTTGGATAGATGATTGTTAATCAAATATGAGTAGGGTATGCTTTAATAGTCAAAGTGATAAAATTTGCTGTTTTCTCTAAACGAAAATGCTGGTATATCAAGGATTCTTTAGT # Right flank : AGGCGTTTCAAAAATGATTGTAATGCTGCGCTTAAATCAAAATAGACTTTTTATGGAAAGATAGTTGATAGAGCAGACCACCCAAGTACTAGCAGGCCATGGTGATGGGATACAGGTGTTGATTGATTTTGCATGAGGACATTATCAAAACAAGGATCGGCGTGAGATGAACTTATCGAGGGGTCTATCGGATATTCAGGCACGGGGACCGTATAAATGAGGCTAGCTGTCAAGAAATAAAGTGCTGGTGGTTGACAAAGTTAATGGCTCGCGTTATATTAATAATCGAACGATCGATCTTTTAAAAGGAGCCAATCATGCGAGAAAAAGATACGGCAAAACAAACGAGTATTATTGATGAGGTCAGTAATATTATTTTAAACGAGGGAATTGCGGCAGTTTCAATGTCCAAGATTGCTAAAGCAAGTGGCATTTCTTCATCAACGATTTACGTGTACTTTACGGATAAGGAAGATGTGTTGAAACAAGTTTATTTAGCA # Questionable array : NO Score: 3.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACATGTGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //