Array 1 140973-138948 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWUN01000002.1 Bifidobacterium sp. 7101 contig00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 140972 32 100.0 32 ................................ TCCTCGTCCGTAAAATCGCGCTTCTCCTCTTG 140908 32 100.0 34 ................................ ACCGATACGCTCGCCCAATGGAAGGCCAAGGGGG 140842 32 100.0 36 ................................ TGGCGGGTTTTGGTCTGGTGTCGTCTGGTAGATAAC 140774 32 100.0 35 ................................ AGGCACGCGCACCGAATCTGCAACATCCTGCGAGG 140707 32 100.0 34 ................................ CGCCCCTTTTTGTTCCTGGAGACGTTGATTTCCG 140641 32 100.0 35 ................................ CGCATAGTACTGCTGATCCGGCCTATCATCCAGGT 140574 32 100.0 35 ................................ ATCGTCAGCGCCCAGCTGCCCTCAGGGCAGGTCAG 140507 32 100.0 33 ................................ CGGGTTAGTGTCGGCGCTTGGTGTCATGAATGA 140442 32 100.0 35 ................................ ATCAAAGATGCCGATTACCAGGAGCAGACCCGCAA 140375 32 100.0 34 ................................ ACCACGCGCGGCTGGCTGCACCAGGGTTATGACG 140309 32 100.0 33 ................................ CTGACCAGGAGTTTTTCCAGCAGGGCTTCGCTG 140244 32 100.0 36 ................................ GGCAACGTCGACAGCCTGGGCGAGGTGGTCATGCCC 140176 32 96.9 34 ...........T.................... AGCCCCAAAGACGCGCAGGAAGTCGAAGGCAGAA 140110 32 100.0 35 ................................ ATCTGCTTCGACGGCAGTCTGGGCCTGGAGCTGCC 140043 32 100.0 34 ................................ CCCGAGCGGCTGCCGGCCACTTGCATCGAGGCCG 139977 32 100.0 35 ................................ CAATGAGGAAGACGGACTGTGACGACCTCGTCGCG 139910 32 100.0 35 ................................ TCTACGGGGATAAGGGTTTCGGCCTGGTGTACCCG 139843 32 100.0 36 ................................ TGGTGTGACCTTGGGCATGTCACACGTCCCGGTCAG 139775 32 100.0 34 ................................ GAGATACACACCTGAAAGGAGGTGCTCTATGTAG 139709 32 100.0 35 ................................ GACAAGGGGAGCCCGCAGGAGCGGCGCATCGACTA 139642 32 100.0 34 ................................ CTTTGATACATGGTCTGCCAGTTTGCCCACTGTG 139576 32 100.0 33 ................................ ATATCTCCCTGCGGGCACCCTACTTGCCTGGCC 139511 32 100.0 33 ................................ ACCTGGACCGGCTTCGAGGACGTTCACGCGATC 139446 32 100.0 35 ................................ TCTGATGCCAGCCGGTAGGCGACTATCGCATAGCA 139379 32 100.0 34 ................................ ATATCCAAGCCGTTGCTGCCAACGGGCGTGATGT 139313 32 100.0 37 ................................ GCCCACTGCATCTGCGTCCTTATCTCAGTTGACAGAC 139244 32 96.9 34 ......T......................... CATTGGCTGTACGACAGTGCAATCCGGCCCGTCT 139178 32 100.0 34 ................................ ATCGACCAGGCCAACGACCGCAGGCAGGCCCCGG 139112 32 100.0 33 ................................ GTGTTCGGATGGAGCTGATATGGAGGGTGCGGC 139047 32 93.8 34 ........................G...G... ACCACTACGATGGTTCTCTACCTGCGGTAAATGC G [139018] 138980 32 71.9 0 ..A..C..T....TA.A...C..A.......A | G [138951] ========== ====== ====== ====== ================================ ===================================== ================== 31 32 98.7 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : GAGGCGCCATATCCCTGTTGATCAAGTGATGATGCTATAGAATCATGGGACTTTGGTTATATGATTTTGATTGTCTTGTATTGTTTGAGTCACTGAAATTAGACGCTGGTTAAGTGGTTGGTGTAATTCTGTAAACAGTGCATTATGCTGACTGATGTTCTGGACCATAGTTGACGCGAAACTCTAGCAATCATGTATTCGTCTGATCCTTCGCGCTGCAGATCGTTGCTTTATGACAACATCCGAGCTAAATTTCGCATGTTTTTGTGGTCAGTGTTCTTTTCAAAGTTACAAGCGGAAAGCTATAGGTGCGAAAAAAGCTAGAATTTTAGTGAAACGGATGAACGGTTGTTTGATAACTGAATAGTGATGTTATCGACTTAAAGCACTGTTTCAATTCCGCGACTAGTGATAGAAACTAGGTAGTTGGGTTAGGCTTTTGGAAGTCGTCGGCCATTAAAGGCCGACCATATATTGGCCATTGGATGTATCATTGCGCT # Right flank : CTGATTGCGTTACTTTGAATTATCCAGACAGCACTGTTTTCTATCGGTAACACGTATCAAATCAGTTCTTTCACCAAAACTCCGTGATAAATTGTACTCCTACTAAGCAGGATTACGAGTTGTTGCTTCGGTATTGTGTCAGTCGTTTTTATACCATTTGCTTGTTACTAGCCCCCGAAAGTGCCGTGCTCCCCTGCATCTGCAGGAATGGTTCTACGGGCCATCGGATGATGCCTTTCAGGAACACAAATATGAGAGGAGATGAATGGCTATGGATGAGGATTTCATGAGAAAAATGGCATCCAAGGATAAGGCCTGCACCACTCATGACCATATTCCTGATGACCGGATCAACAGTTACGCGTCATGGTATCCCATCACTGATGATATGGATGAGACCGAACGCCGGGTCTGGGATTCGCTGGATGATGAGGACAGGAAAATGATCCAGCCTGATCGTACATACTATGGGACGAACTATGGTGCTGGCTTCGGCGGCA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //