Array 1 35393-33463 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKWW010000021.1 Clostridium algidicarnis strain CM003 contig00021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 35392 30 100.0 36 .............................. TCAGGGTAAGGTGATCTATTATTAATACGTCTAAAC 35326 30 100.0 35 .............................. TTGTCTTTTCTACACTTAAGGTAATCAGTCTTTTC 35261 30 100.0 35 .............................. GCATCTAAACCCATATCAGTCACCCATGATTTAGG 35196 30 100.0 36 .............................. TGTAGTTTTCTTCTCCATTCCTCCATGGTAAAACCT 35130 30 100.0 35 .............................. GTGGCATTTATGGAGCAGTTTTTTAATTCTTCATC 35065 30 100.0 36 .............................. ATTTTAGAAGCTAGTGTAAAAAGATTTATAGTAACA 34999 30 100.0 35 .............................. TCCCTGGCTGTATACAGGTCTTCTTCTGTAATGTT 34934 30 100.0 35 .............................. TTGTTTACTATAAAAGTGCCTATGATCGCCTGTTC 34869 30 100.0 35 .............................. CCAAAGTTATTAGGACTTTGAGAAGCTTGACCACT 34804 30 100.0 34 .............................. TTTCTATGTTAGGAAAGATGGGTCAGTATATAGA 34740 30 100.0 37 .............................. TAAGTACATTACACTTAATACCAGGTACGTGCACCCT 34673 30 100.0 34 .............................. CACCAAGGAGGTGAAAAATAGTGGATAATACTAA 34609 30 100.0 36 .............................. ATAAGAAAGGGATGGGGTAATGGAAATTAATTTTCC 34543 30 100.0 35 .............................. AACATTTATTCAATATATCCATATTTCACATCTGA 34478 30 100.0 37 .............................. ATTTCACCTCGCTTATTAATTCTTCAAGTTCATTAGT 34411 30 100.0 35 .............................. AAAGGAACGTCAACATAATTTAGATTTATTTGAAG 34346 30 100.0 35 .............................. AAATAAGGAGGTGAGTAATATAAGCGCAGATTTAG 34281 30 100.0 34 .............................. GCATCACACAGTTCAATCTTAGTTGGGGAATTAG 34217 30 100.0 37 .............................. TATGGATTATTAATATTGCCACTATGGTCCACTTCTT 34150 30 100.0 35 .............................. CAATTTATTTCTCCTGCAGTACAACAATTATCCCA 34085 30 100.0 36 .............................. TGTAAGGATACTCATAAGTTTTAAGCTCGATTTCTG 34019 30 100.0 36 .............................. AATTCTAAAACTCGAACATGAAACCGAACCATTGTT 33953 30 100.0 35 .............................. CAGAAAAAGCTACTAAAAGAAAATAAGATAACAAA 33888 30 100.0 36 .............................. AGCACAGAGCAGTTCAATATAATGCTTCAGTCCAGC 33822 30 100.0 37 .............................. AGCGAGTAGAACTTATGAATAGTTAGAGGTGAACTAT 33755 30 100.0 36 .............................. CCATCATAATCTATTTTTAAAAAACTTTTAGTTTCT 33689 30 100.0 36 .............................. TTGACTTGTAAATGTCCATCACATGAGATTCCTTAA 33623 30 100.0 34 .............................. TTATGATGCTGCTGGACACAGAGGATACCATTAT 33559 30 100.0 37 .............................. TTGTTAATTCTTTTATAACCATTTTATACATTATAAA 33492 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 30 30 100.0 36 ATTGAACCTTAACATGGGATGTATTTAAAT # Left flank : AACCTTAACATGGGATGTATTTAAATCACATCTTGAATCTATCACAACATGGATTCCCAA # Right flank : TGTTTTCTTTGGCTCCCAAATCCTTCAGTTTATTCTATTCAATCTTTTAAAGTCCACTTAAAAGTGATTCCCCTTGATAGGTAACCCCTTCCGCCGCAACAACCTATCTTGAATTTATCCGCTCTTATTACACAGTGTAAAAGAAATTAATAAATTAATTAATTATTAGTAATAATTTTTCCTCTTATTGCACATAATATTAATCGTAAAGCTTAACTTAACTACTAAATTAAATATAGGAGGTCTACTTATATGAAAGAAAAGTCCTATGCCTTTAAAAATGAAAGGGGGGAGCTTATAAATTACATTGTTAAAGAGTATCTTTCGGTTAATAGCAGTGACTATGTAATTATGTCACCTGAAAATAAAGCTACACAGCTGGAAGTTTATAAGTTTAATCTTGAAGATGGTAATGAGTACCTAGATGCTGTTAAAAACCAAGGGGAGCTTAATTTAATAAAAGCTTCTGCAAAGACTATTTAATTTAAGCTTTACATAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 1-1200 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKWW010000042.1 Clostridium algidicarnis strain CM003 contig00042, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1 26 86.7 35 ----.......................... CACATCTTGAATCTATCACAACATGGATTCCCAAA 62 30 100.0 36 .............................. AGGATAAGATACAAGATATTAAAGATATGGCTGGCA 128 30 100.0 36 .............................. GAATTAAAAACAAAAGAGTAGATGGTACTGTTTTGT 194 30 100.0 36 .............................. CACGCCCTCGATAACTGGCTTAATGCTATTACACAA 260 30 100.0 36 .............................. TTACTAATGCGGTTTTCCCCATACTTGGCCTTGCTG 326 30 100.0 36 .............................. TATAATAGTTTACTCATCTACAACATCCATTTATGA 392 30 100.0 35 .............................. GTTTCATTTATTTCCAATATTTTTAGTGCTCTAGG 457 30 100.0 36 .............................. GACCTGTTGATTGGGTGAATATGAGCATTGAAAAGC 523 30 100.0 34 .............................. AAAGACATTATGATAGTAGATATAGGCGGTAGAA 587 30 100.0 36 .............................. TCCCATATATCTTTTGTGTACCACTTATGCCTAAAT 653 30 100.0 36 .............................. TAGATAACACCCTCAGCTAAGCACCATAAACCTAAG 719 30 100.0 36 .............................. AGGAAAAACTTTATCTATGGTTCTAGAGGCTTATAA 785 30 100.0 37 .............................. TATACCTATCAAGTCCGCAAAGAGGAGTGTTTAACAC 852 30 100.0 35 .............................. CCTCTTAGACTTCGGCTTTAGTGCTTACTATACCC 917 30 100.0 35 .............................. ATGGGATTAACAACGAAGGATTTACCACACTATTT 982 30 100.0 34 .............................. TACTGTTTCTTTTGCAAACACTACTGCATTTTTT 1046 30 100.0 35 .............................. ATCAAAGCCATTGTTTGCATATCGAATAGATTATC 1111 30 100.0 34 .............................. ACATCATGACCAAGTATTTTAGCAGCAGTCTTAA 1175 26 86.7 0 ..........................---- | ========== ====== ====== ====== ============================== ===================================== ================== 19 30 98.6 36 ATTGAACCTTAACATGGGATGTATTTAAAT # Left flank : | # Right flank : | # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 25680-44377 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKWW010000020.1 Clostridium algidicarnis strain CM003 contig00020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 25680 30 100.0 36 .............................. TTTTTAAATACATTTGCATAAACTAAACTATTGCCT 25746 30 100.0 36 .............................. TAAATCTATGGTTTACGGTAAACCTTAAACCGTAAA 25812 30 100.0 36 .............................. AACATATAGTTTTCTAGCACAAATGTATTACTAAAC 25878 30 100.0 37 .............................. CCCATAGCAACTGTGTATTGACTAGTAGCAGAATACA 25945 30 100.0 36 .............................. TGCAGACTATGAACTAGAAGAGGTTGAGGAAGTTGA 26011 30 100.0 35 .............................. ATGGCTGTGCAAGTGCAAGTGTGGCGAAACAATAA 26076 30 100.0 36 .............................. ACGAAAACAAAGTTAAGATTTTAAACGATATAAGCA 26142 30 100.0 34 .............................. CCTCTTTTTTTGGTCCACTTCTCTTTATAGATTT 26206 30 100.0 35 .............................. AGGAGCTGCTAAAGGAAACAGTGGAGCACATAACA 26271 30 100.0 34 .............................. AAAAGACTTAGACTATATTATAGATTATGTAAAA 26335 30 100.0 36 .............................. AAGGTGATAAGGGAGATACAGGAGCCAAGGGAGAGC 26401 30 100.0 35 .............................. GACAAAGAAAGCATTGCTTTTTTTTGCTCAAAATA 26466 30 100.0 36 .............................. ATCCTTTTTAACAAATAACAATAGTCGCTCTAAAAA 26532 30 100.0 35 .............................. ATCGGTTCAATATTTTTATTTTTATATATTTTATC 26597 30 100.0 36 .............................. ATACTTCCGTCCTGGAATAGCATACCAATATTACTA 26663 30 100.0 36 .............................. ATGTTAGGGTTATAGACAATATCAATTTCCTTATCT 26729 30 100.0 38 .............................. CAGTTGATAGTATCGTTGCTGGACTAAGCATATTACTC 26797 30 100.0 36 .............................. CCATTAATTAAAGACCTAAGAAACTTTTCTGTAGAA 26863 30 100.0 36 .............................. CCATATCATTTAAAGCACCATCAGAACTACCTATTG 26929 30 100.0 35 .............................. ATCATATTGTAATAGCTTTCACTCACTTCAAGTTT 26994 30 100.0 36 .............................. TAACAATTAGTTGTATAACTAGATATTTCTTTTCCT 27060 30 100.0 37 .............................. AATAAGTATAAGCTTTCTAATCTTTCTAAAGCTCTTT 27127 30 100.0 37 .............................. ATGCACTTCTCTTGATTAGTATATAAGTAGAATTTAT 27194 30 100.0 36 .............................. CAAATGGGTTCGTTGATAATATGGCTCCTGCGGTAG 27260 30 100.0 36 .............................. AGATCATCTTCCGTCCAAATTGATGTTTTCGAATTT 27326 30 100.0 37 .............................. TTACTGCTGAACTTAGATTTAGCGCATCAGTTGTAGT 27393 30 100.0 37 .............................. TTGAAAATACTTACAGAATTAAGCAAAACACTAGCAA 27460 30 100.0 37 .............................. ATTCTGTATCATTATCTTACCTCCTAATAATTACTAT 27527 30 100.0 37 .............................. ACCCCATAGTGTCTACTATGCTTTCCATTCTCTACAT 27594 30 100.0 36 .............................. TAATCTTATCCCCCAATTTGTATCTGCTAGGCTCTA 27660 30 100.0 34 .............................. CAATATCTTTGAATTATGTAACTAATTCATTTCC 27724 30 100.0 37 .............................. AAATCAGTTTCCGTGATGTCAAAGAACTTAACCAAAG 27791 30 100.0 36 .............................. TATTCTAACCTTTCGGCGCCAACTAAAGCATTTAGA 27857 30 100.0 38 .............................. ATAAATGAAGTTAATCCATTAGGGGACTATGTATTAAA 27925 30 100.0 37 .............................. CTAACCAAAGTAAAAGTATAAGCCATCTTGAATTCAC 27992 30 100.0 35 .............................. AGTAATAGATATGTGGATAGATAATCAAAATGTTG 28057 30 100.0 34 .............................. CAACGCATACTTTTCGCACCGACATTAATAAAAG 28121 30 100.0 36 .............................. TATTTTAAATCTTCTTGATACCAGCTATCTCTTTTA 28187 30 100.0 36 .............................. GATTCACTCACAGTGGAAGGAGCAAAAGTATTTAAG 28253 30 100.0 36 .............................. GGTTTAGGTTTATAGAATTCATTAGTACTAAAATCA 28319 30 100.0 35 .............................. TGCACACCATTCGGTAATCCCAATAGTGGACTTTT 28384 30 100.0 36 .............................. GATTCTGCATAGGCTGTAGTTGTCTTTACCATCAAT 28450 30 100.0 36 .............................. GCTACAGCCAACTTATTAAGTGCTGCATACATTAAT 28516 30 100.0 35 .............................. TACTCTTCTTCAATTCCCCTTATATATTCTTCCAC 28581 30 100.0 36 .............................. AATATGTAGATAACTATGTAAGATTTGACTATGTAA 28647 30 100.0 36 .............................. AAGCTGCACTCATAGCAACAACAGTATTTGCAATCT 28713 30 100.0 36 .............................. TTGTCCTTGATGCTTAAAACCTTTCTAAGTTCCTTT 28779 30 100.0 36 .............................. CCTCTTTTTTTGGTCCACTTCTCTTTATAGATTTTG 28845 30 100.0 35 .............................. CACTACTTTTACTGGCTTTCATGTGCTTGGCTCGG 28910 30 100.0 36 .............................. GGTTTAACAGAATGAAAGAATATGGTTTTGCTGAAA 28976 30 100.0 35 .............................. TAGGATATATAACAGCTTCAATAAACAGCTATGAA 29041 30 100.0 36 .............................. TTTCTTGCATTACTTCTTTCAAACTATCCGTTTCAA 29107 30 100.0 36 .............................. TATTCAGGGACCATGAAAGCTCCATCCTTGACTTTA 29173 30 100.0 36 .............................. TCACTTGTTTCTATTGTATGTTTTATATTTGTAATT 29239 30 100.0 35 .............................. TTTATATTGTTGTTGTATTTCATCACAATGTTTTC 29304 30 100.0 36 .............................. TAGTATAGGTCTTATTGTTAAATTTTATTATTTCTT 29370 30 100.0 35 .............................. TGAAAGGTGATAGATACTATATAAGACACAATGAG 29435 30 100.0 35 .............................. GTCTTAGCCATCTTCTTATACTCCGCATAAGTTTC 29500 30 100.0 35 .............................. TGTTTAAAAGAATAAAATATTAAAATAGGTTTTCC 29565 30 100.0 36 .............................. TCACCTTCCCTTTACACATTACACAAAAAAGACACC 29631 30 100.0 37 .............................. TATATCTTGCCATGAGTTTTAAAAACTTCCATTCTCC 29698 30 100.0 36 .............................. CCACTAAAAGTTTCATGAGGTACAATCTTAGGTCTT 29764 30 100.0 37 .............................. TCTTCTGCGGATTCTACACTGTCAAAGTCATCTTCTG 29831 30 100.0 38 .............................. AGGCTACCAGGTAAACCCATTGTTAAAGCTTTAATCAT 29899 30 100.0 35 .............................. GCTAAAGTCCTTGTACCAAAAGTATTTATAAAACT 29964 30 100.0 36 .............................. AAGCCAAATCTTAAGTCGGCTATTTCACTTTTATTT 30030 30 100.0 37 .............................. CAGATGAAATATTATTTCAAGACAATGTGAAGCCTAA 30097 30 100.0 36 .............................. CAACACCTTCATATCCTATTGGATTACCACTCTCCC 30163 30 100.0 36 .............................. TTTAGATAGTGTAAATAATATTGTTTATCCTACCTT 30229 30 100.0 37 .............................. ATCTACCGTCCTATCTAATACATCTTCGTTACTTGTC 30296 30 100.0 36 .............................. TAGGTTCCCGCCTCCTAATTTTTATTCCTTTGGGGA 30362 30 100.0 37 .............................. AGGGTGCAGGTCTTACAAATAGGGGGAGTACAAACTA 30429 30 100.0 36 .............................. TAAGTTCTTGAAAGCTTTTTCCTGATACTTCTTTTA 30495 30 100.0 35 .............................. AGAATAGATACTAGTAAACATCATTATTGCTCATA 30560 30 100.0 36 .............................. AGTAATTCTTCTTGGAGGTTTAAAAAATCTCCGTTA 30626 30 100.0 35 .............................. CTAAAAGATGTGGGCGGAAAAGTTAGCAATGCTGG 30691 30 100.0 36 .............................. ATAACAGGTAAGGAATATATAGCAGCTAAAGCCACG 30757 30 100.0 35 .............................. TCTCTATATAGCATTAATATAGCATCTGCATCTTG 30822 30 100.0 36 .............................. TCTTTGGCTTTCTTGGCCTCTACGCTTTCTTTTCCA 30888 30 100.0 36 .............................. AATGGTGTGATGGCGCAGACCCTACGGAGGGTTCAA 30954 30 100.0 35 .............................. AGTTATAAGGGGTGTCAAAGGGGGAATAATGATGC 31019 30 100.0 37 .............................. TGCAAATGCCTTAGGACAATATTTTGTGTTTCACCTT 31086 30 100.0 35 .............................. TTTTCTTGCTTTAAATTGTCCATATCTTCTTCTAG 31151 30 100.0 36 .............................. CCTTCCTAATTGTTTAATTTTATCTATAATCGTTGG 31217 30 100.0 37 .............................. GCAATTATAAATTTATCGTTTATTTGCATTGTTGCGT 31284 30 100.0 37 .............................. GTCTTTCCATTATTAAGTTACTTTCCTGTTCTGTTTC 31351 30 100.0 37 .............................. GTTGATTCTCAATTGATATTCTAAAGTTATTAACATT 31418 30 100.0 36 .............................. TGAGCCAAGCCTAGTAAATGGTGCAAAAGTAGCTAG 31484 30 100.0 34 .............................. ATGTTGTACCACTACCACAAACAGGATCTATAAC 31548 30 100.0 36 .............................. CTACTGTACATATAAGTATCTCTATCCTCTAATCCT 31614 30 100.0 35 .............................. CCTTGCTGCGTACCTATTCCTTTTACATCTATTAA 31679 30 100.0 35 .............................. CTACTGTACATATAAGTATCTCTATCCTCTAATCC 31744 30 100.0 35 .............................. TTTTATAATTCTTTATATTGTTTTCTTTTGGTAAG 31809 30 100.0 39 .............................. TGCTTACTTCTTTATTAATGTGTAGCTTTATTTCTGATT 31878 30 100.0 35 .............................. GCTGGTGCTTATTGGGGTATGTTCCAAGAGTTCGG 31943 30 100.0 34 .............................. CCGTTTTTATTTTCTCCACCAATATACCATTCTG 32007 30 100.0 34 .............................. ACTATTTCAGTCGGTGTTAATTTATTTAATCCTT 32071 30 100.0 35 .............................. TTTTCTATAAACATTTTATATTGCATATCTTCTAG 32136 30 100.0 36 .............................. AAACACTAGCAAATGTACGTTATTAGATTTATTTCA 32202 30 100.0 36 .............................. AATACTAATTTATTTCTCTTCATTATTAAAACCACC 32268 30 100.0 37 .............................. ATGAAAAGAAAATAACTTCAAGCGTAAATGGTGTTAC 32335 30 100.0 36 .............................. TGAATTTGAAATCTTGTATTGTGATATAGGTATTTG 32401 30 100.0 35 .............................. CCGAATTATTGCCTTAATATTTCTATTAAGCGACC 32466 30 100.0 36 .............................. CCTTTATAGATTATATTTTCTCTTTTTAGCAATTCT 32532 30 100.0 35 .............................. AATTTTGTTATTAAATCTGTTGCAAGTTCGTCTGT 32597 30 100.0 35 .............................. AGCAGGGTTTAATAGAGATACCGCAGCCGACCTAT 32662 30 100.0 34 .............................. TATTCTAGATATGGGGGCGTTGGATTTAGTGCGT 32726 30 100.0 37 .............................. AACCTATAAGGGACTTTACATTAATTTTAGATATAGC 32793 30 100.0 37 .............................. TGCCCTTCATCTCTTGCACCATTTTTTATTATGTCTT 32860 30 100.0 36 .............................. ACTATAAAAGAAATATATTTAGATAAGATAGGGTGG 32926 30 100.0 34 .............................. CATCTAAATCTAAATAATCTGCTAAGGCAGTTCT 32990 30 100.0 34 .............................. TCTTTTAAGGTTTTTAAAACTATAATTCTTCTTG 33054 30 100.0 36 .............................. TATAGGTTGTCGTTTCCGCGGCTTTTATTCCCTTTG 33120 30 100.0 37 .............................. ACGAAGAAAGAAAGCTTAAATTCCAGATAAGCTTAAT 33187 30 100.0 36 .............................. GTAAATTTTCCTCTATATAAAATTATATACCTTGCC 33253 30 100.0 35 .............................. AAAGTCAAGCGAAAAATTAAAAGATGTGGGCGGAA 33318 30 100.0 36 .............................. GAAGAACTTATAACCAATAAATCCGACCTCCAGAAG 33384 30 100.0 36 .............................. GGATGTAATGCAATGTGTGTATGAAAATAATATCCC 33450 30 100.0 35 .............................. ACTAAACGAAATACTACTAAATAAAGAAGTTGCTG 33515 30 100.0 33 .............................. CTGGTTGGAAAAAAGAAGATAGATATAGTTTAG 33578 30 100.0 36 .............................. AAAAAAGCTAAAAATACAACAATAGCATATTACAAA 33644 30 100.0 36 .............................. TAGTAAGCGTAACCAACACATCCTTTATAAAGTGCC 33710 30 100.0 36 .............................. GGCTTTATTTTTATATAGGGCCTCTTTTAATTAAAC 33776 30 100.0 35 .............................. AAAAAAGCCCAATTTGCACGGGGCAATTAGTTCCA 33841 30 100.0 35 .............................. TTATTTGATTAAAGGTTTCCATATTGGTGTAATTG 33906 30 100.0 36 .............................. TTCAGCTGCTCTTTATATGCAATAGTATGATGTATC 33972 30 100.0 36 .............................. TTACAAAGTAACGCTTGTTTATTTTCTCTATACTTT 34038 30 100.0 36 .............................. CAACTATAAGCTTCATGGCCTAATTTCCTTAACTCT 34104 30 100.0 36 .............................. TGGTACTATAATTGTATATACGTATCTCTATACATA 34170 30 100.0 36 .............................. AAAAATTGGCTATCCGTAAGCTTAATATCTAAAGGT 34236 30 100.0 36 .............................. TAATCAAATGCTTGTTTACTTTGTTGATTTCTTTTA 34302 30 100.0 36 .............................. TAAGGTATGTAAGTTAAGTAATGCAAATTATTTTCG 34368 30 100.0 36 .............................. AGAGGACCTTTGAGCTTTCTAAACCATGATATTCTC 34434 30 100.0 36 .............................. ATTCTATATCATTCTCTTGTATATATTTGACAGCCC 34500 30 100.0 36 .............................. CTAATACTTTTCTAGTACTACCATGTAATTTTATAT 34566 30 100.0 36 .............................. AATATAAAGTATTAGTTATTTTACCTTGCAAGTCTG 34632 30 100.0 38 .............................. AGAAGAAAGAAAGCAGAGGATTAGAAGTAGTTGCATTA 34700 30 100.0 36 .............................. ATATAGTGGCAAGACTAGCCATGATGATTATTATAA 34766 30 100.0 34 .............................. GATTTAATTAAAAATAACTTAGGTGGTTATGTAT 34830 30 100.0 35 .............................. CATATTTGGCAGAGTTCCAGTTGGAATAGCTGAAT 34895 30 100.0 36 .............................. CTCTTAATAACAATTTCATCTTCATGACCTTTAAAA 34961 30 100.0 35 .............................. GATATAATGAATGAAATAGGTGAATCATGCATTTC 35026 30 100.0 36 .............................. TTGATTACAGCCTGTATAATAGTTTCTATTTCCCTT 35092 30 100.0 37 .............................. CATATCTGATGCAGAGGTTCTTGTACGCCGATTATCC 35159 30 100.0 35 .............................. GGAAATCATCCATATAGAAAAGAACATGGTTTATT 35224 30 100.0 35 .............................. TATACTTTTAATGTAATAAAAGAACCCTCTTTTGA 35289 30 100.0 36 .............................. TTAGTTTATACCTCCTATTTGTAAGACCTGCACCCC 35355 30 100.0 35 .............................. ACGAAGAAAGAAAACCTAAATTTCAAATAAGTTTA 35420 30 100.0 35 .............................. AAATCTACATCTACAAATGTGCTAGGCACATCTTC 35485 30 100.0 36 .............................. CTATTGAGGAGGAGGCTCCAATGGATAAAAAATATA 35551 30 100.0 36 .............................. ACCCAAAACATTTTACCTCCATCTTTGTGTTCTATA 35617 30 100.0 35 .............................. GGCAAAATATATTCTACCCCTATTTTCTCTAATTC 35682 30 100.0 36 .............................. TAGATAACAGAGAATCAGTTAATCAACTTATAGAAA 35748 30 100.0 36 .............................. TGTAAACAAGGTAAGGTGCCTTTTGTCCTTCTGGTG 35814 30 100.0 35 .............................. TTGCATGTTGAGTAGCATATTTCTCCATAAGCATT 35879 30 100.0 37 .............................. GCAAGTAACATAGAAACCTATGTATTAAGTAGCAATT 35946 30 100.0 36 .............................. AGTAAGACCTTCGAAAAAAGTTTAAATTTAAAATAA 36012 30 100.0 36 .............................. GTTAGTACTGAATCGTATCAAAATTATTATTTGTAT 36078 30 100.0 35 .............................. TATTTTGTAGATAATAGAATAAAAAAACATGGAAT 36143 30 100.0 36 .............................. CTAGGTAAATTCGATATTACACCTGTTATTTGATTA 36209 30 100.0 36 .............................. ATTGTGATAGGTATTGTATTAGTATTATTAAGTTTG 36275 30 100.0 36 .............................. CGGAAGATATACCGAATGCATGGCAATCTGTATTGG 36341 30 100.0 34 .............................. AACACTTGGGCAGTAGCCATAAGCCTAATATTAA 36405 30 100.0 36 .............................. TATTCTAAATATGGGGGCGTTGGATTTAGTGCGTGT 36471 30 100.0 36 .............................. ATGTATAAATGAATAAATATACAAATAAAGCGTATC 36537 30 100.0 36 .............................. TACATTTTAGCAATGCCTATTTTAAAATACTCTCTT 36603 30 100.0 36 .............................. TTTTGTTTTACCTCCTTGTCTGTAATTACATTGTAC 36669 30 100.0 37 .............................. ATCATGGCAGGAACAGAAGCTTTAGATGAAGCAGAAG 36736 30 100.0 36 .............................. CCCCTTAAAATATAGTATTAATCACCTTTTCAATAC 36802 30 100.0 36 .............................. TTTTCTAAAGAATTGGGGTTAAGGCATTTATCAATT 36868 30 100.0 36 .............................. ATTTCTTGCTGTTGCATCTTTAGTAATTTTACTCTA 36934 30 100.0 36 .............................. CTATCTAAATTCCTCCTATTAAAAGAGTTTATACTG 37000 30 100.0 35 .............................. CCAGTTTGATAAGTTCTTTTCCCAATTCTCTTAGT 37065 30 100.0 35 .............................. AGTCCTTCAAAACTATATATCGACCATGCCTTATC 37130 30 100.0 35 .............................. CTTGCTGTACTTCTTTTATTTTTAGATATTCTTAA 37195 30 100.0 36 .............................. TAAAATTGTATGGAGCTCTGTATCTATATCTTGCCC 37261 30 100.0 35 .............................. ACTAGAAAATCCCAAGAAATTGAAAGAGAAAAGAA 37326 30 100.0 37 .............................. ATAGGAATAGAAATGTGTAATTCAGGTGGATTTATTG 37393 30 100.0 35 .............................. TCAGTCAGCACCCCCAAAACTTGTTATTTTTTTAT 37458 30 100.0 36 .............................. GAAACAGTTAAAACATATGAATAAGTTGTTCCAGAC 37524 30 100.0 35 .............................. AATTCATACTTTTGGGGACTTTCGAGAGTCCCTTT 37589 30 100.0 36 .............................. TAACCTAACAAAAAATGACCTACTATGTAAACATTA 37655 30 100.0 36 .............................. TACATTTTAGCAATGCCTATTTTAAAATACTCTCTT 37721 30 100.0 36 .............................. TTTTGTTTTACCTCCTTGTCTGTAATTACATTGTAC 37787 30 100.0 37 .............................. ATCATGGCAGGAACAGAAGCTTTAGATGAAGCAGAAG 37854 30 100.0 36 .............................. CCCCTTAAAATATAGTATTAATCACCTTTTCAATAC 37920 30 100.0 36 .............................. TTTTCTAAAGAATTGGGGTTAAGGCATTTATCAATT 37986 30 100.0 36 .............................. ATTTCTTGCTGTTGCATCTTTAGTAATTTTACTCTA 38052 30 100.0 36 .............................. CTATCTAAATTCCTCCTATTAAAAGAGTTTATACTG 38118 30 100.0 35 .............................. CCAGTTTGATAAGTTCTTTTCCCAATTCTCTTAGT 38183 30 100.0 35 .............................. AGTCCTTCAAAACTATATATCGACCATGCCTTATC 38248 30 100.0 35 .............................. CTTGCTGTACTTCTTTTATTTTTAGATATTCTTAA 38313 30 100.0 36 .............................. TAAAATTGTATGGAGCTCTGTATCTATATCTTGCCC 38379 30 100.0 35 .............................. ACTAGAAAATCCCAAGAAATTGAAAGAGAAAAGAA 38444 30 100.0 37 .............................. ATAGGAATAGAAATGTGTAATTCAGGTGGATTTATTG 38511 30 100.0 35 .............................. TCAGTCAGCACCCCCAAAACTTGTTATTTTTTTAT 38576 30 100.0 36 .............................. GAAACAGTTAAAACATATGAATAAGTTGTTCCAGAC 38642 30 100.0 35 .............................. AATTCATACTTTTGGGGACTTTCGAGAGTCCCTTT 38707 30 100.0 36 .............................. TAACCTAACAAAAAATGACCTACTATGTAAACATTA 38773 30 100.0 35 .............................. TTAATTCACCCCATAAAAAAAAGAGCGGTTAAACG 38838 30 100.0 35 .............................. TTACTATACCTCCTAAATTCTTATTAACATAAGTA 38903 30 100.0 36 .............................. CATAAAAAAATGAAACAATTGCACCTGCTATTATTC 38969 30 100.0 36 .............................. CTATAAGCTTGTCACCTCCTTCGGCTTTCGGCAAGT 39035 30 100.0 36 .............................. GAATCTAATAAAATAGAAGTTTTAAGTACATCTAAA 39101 30 100.0 36 .............................. TTTAGAATATATAAGAAAACTAGAAGAGGAAATAAG 39167 30 100.0 36 .............................. CCTCTTAGCCTTTGAAGTCTTTTAAATACTTTACTT 39233 30 100.0 37 .............................. AAAGTATATACCAGAGGATTTAATACCAAGGGATCCT 39300 30 100.0 35 .............................. TTACTATACCTCCTAAATTCTTATTAACATAAGTA 39365 30 100.0 36 .............................. CATAAAAAAATGAAACAATTGCACCTGCTATTATTC 39431 30 100.0 34 .............................. TTAATTCACCCCATAAAAAAAAGAGCGGTTAAAC 39495 30 100.0 36 .............................. TCTGTTGTTGTTGCTAACCTCTGTATGCTAATTTTT 39561 30 100.0 36 .............................. TTGTATTTTTTAACAGTAGTTAAATTGTATACATAT 39627 30 100.0 36 .............................. GAATCTAATAAAATAGAAGTTTTAAGTACATCTAAA 39693 30 100.0 36 .............................. TTTAGAATATATAAGAAAACTAGAAGAGGAAATAAG 39759 30 100.0 36 .............................. CCATCTCTGCTTTTAGCAATTAATATATCCATTATA 39825 30 100.0 35 .............................. TAATATAGACATAGTGGAAAAAGCATTAAATATCT 39890 30 100.0 37 .............................. CAAATGCAACTTGCAAGTGCGGGGTTAAAAACTTTCG 39957 30 100.0 36 .............................. AACAAAATAATATGGAAATGTAAAGCACCACGCTTT 40023 30 100.0 36 .............................. GATATTCTTATAAATACACAAAATAAGGGAAAAGTT 40089 30 100.0 35 .............................. TTTTTATATTTTTATTCATTGGTACCCCTCCTAAA 40154 30 100.0 36 .............................. CCCATTAATAATATTGGGAGGTTGCTTTTTAACCCT 40220 30 100.0 35 .............................. CTAAATAGGATAGATAGAGTAGTACTAAGATTAGA 40285 30 100.0 35 .............................. CAGATATGCGGAGTTTTATCACAGATATGCGGAGT 40350 30 100.0 36 .............................. AATCTATCTACCATAATATCTGTGGTATATACTTTT 40416 30 100.0 39 .............................. GCGGAATAGCGGTTACTAAATTTACAGTAGCAGTTCCAA 40485 30 100.0 35 .............................. CTACAGATGGAATAGAGGGGCAACGAACAGTTAAC 40550 30 100.0 36 .............................. ATATGTATCTAGAAGGTAATGGCGCTGGAATTATAG 40616 30 100.0 36 .............................. CCTCTTAGCCTTTGAAGTCTTTTAAATACTTTACTT 40682 30 100.0 37 .............................. AAAGTATATACCAGAGGATTTAATACCAAGGGATCCT 40749 30 100.0 38 .............................. TTATAATTCCCCCCATTATTCTTGCATTCCAAATATAA 40817 30 100.0 35 .............................. TAGTTAATAAAACCTATTCCCAATATAAATGTGAA 40882 30 100.0 34 .............................. GCAGATTGTGCAGGACCTGACATCTAAGTTAAGT 40946 30 100.0 34 .............................. TATAGTAATTTCATTTCTTGTGTCATAACATGGT 41010 30 100.0 34 .............................. ACATCATAGTAACATACTATAGGCATTGTATATC 41074 30 100.0 36 .............................. TTAATTACAAATGGCCTATCAGGCATATCATATACC 41140 30 100.0 36 .............................. AAATTGCACTAGCATCTCCTGCAAGTACATTTATCA 41206 30 100.0 37 .............................. GATCCTGGTGATAGGTGTATTTTAGGCTTCACATATA 41273 30 100.0 37 .............................. TTAAAAACTAACATAATTTACAATAATTAAACTCTTC 41340 30 100.0 36 .............................. TTTTTATTCATTTCTATTCCACCTTTTTTTATTTTA 41406 30 100.0 36 .............................. TCTACTCCAATTATTTGTTTAAGCCTTAATAACTCG 41472 30 100.0 34 .............................. TTGATCTATATGACAATATAAAAACTAGAGTAAA 41536 30 100.0 36 .............................. CTATAGCTAATGCCCCAAGTATTTTCTCCAAAATTG 41602 30 100.0 37 .............................. TCTCCTAGTATAGCACCCACCACAGCTTTAGCATAAG 41669 30 100.0 37 .............................. AACAAATGGCTACAGTTGTAGAGTATGGCAAGAGATA 41736 30 100.0 36 .............................. TAACTTTTTTTACTTCTTTTTCAATTTTGTAGTAGT 41802 30 100.0 37 .............................. TGTATCCTTTATTGTGTAGTTTTTTAGGTGTATTAGG 41869 30 100.0 35 .............................. TTATTAATCTACCTACCTTTATTCTTTATTAGCTT 41934 30 100.0 35 .............................. TTAATATAACTTTGTCAAGTATTATTTAATAAATA 41999 30 100.0 37 .............................. CGGTCGTATTCTAGTATGTGGTATTAGATATTATATA 42066 30 100.0 35 .............................. ACAGAATCGATGCACCTTGTAACCCTTGGTATCAC 42131 30 100.0 34 .............................. TCTATCGTAGGTTCTTCCGGATCTATAATCACGG 42195 30 100.0 34 .............................. TCAATTAGAGACTAATAATATTGAAGCAATGCTA 42259 30 100.0 36 .............................. ATGTAATGGACATTATTAACTTGCCCTATACGGTGC 42325 30 100.0 34 .............................. AACTTAATGGCCATTACAGATGCTGCAGTGCCAA 42389 30 100.0 35 .............................. GAATCTTTTATGCTTACATTTAAGGTTAATCCTTT 42454 30 100.0 34 .............................. CCAAATACAACTGTATAGCCTTTTTTCGGTTTAC 42518 30 100.0 34 .............................. TATACTGTATTTTTATTAGTCTTTAAAATTGAAG 42582 30 100.0 36 .............................. GTAGACATATAAGTTGTTGTGGGTTCAAATTGGATA 42648 30 100.0 34 .............................. TTAATTTTATAATAAGGTTTATTATCCATTTATA 42712 30 100.0 37 .............................. TTTGTTTTTTACTAAAGTTTATAAAGTACCTGCATAT 42779 30 100.0 36 .............................. TCTGTCAAAAATCAAAGTTAGATGATTGGTGTGAGC 42845 30 100.0 35 .............................. TCATCTGTTCTTATACAAGAAAAAAATCCTCCTGC 42910 30 100.0 35 .............................. GTATGAAGATTATAAAAGCATACAGGTCTTTAAAA 42975 30 100.0 35 .............................. AATAAAGCTGGTTGAGGTTATTTATGATTCTAACA 43040 30 100.0 36 .............................. GAGTTAAATACCTTGGAAGATTTCTTAAATTCTAAC 43106 30 100.0 35 .............................. AAGTTACTTGTATATCCTAGTTTATCCATTTCAAT 43171 30 100.0 34 .............................. GACATATTTTTAAACCTAATTATCTTTTTAGCGG 43235 30 100.0 35 .............................. ATATCTAATCCAATTGATATATCCATAGTGTTTTT 43300 30 100.0 36 .............................. AACTTGTCCACCTTATTATTACCAAACTTCTCTGGA 43366 30 100.0 35 .............................. CCTGACATTTATAAATCCTACGAATAAAAAGCTGA 43431 30 100.0 36 .............................. TAAGTACTTTAGGTGCCAGCATTCTCACTCCTAGTT 43497 30 100.0 36 .............................. CATATATGTACAATCCTTTTATTGTACATATAAACC 43563 30 100.0 35 .............................. CTTTCCAATGTTAAGCAAAAGTATGGTTACAAATG 43628 30 100.0 36 .............................. GTCCATGTGCCATTTATTTTATATTTGCATTTATAT 43694 30 100.0 36 .............................. AGCCTAATTTATTAACATGTGCTAAAACTCTGGATT 43760 30 100.0 35 .............................. CTAGCGTGCATCGGATAAGGCTGAACATTTATAAG 43825 30 100.0 36 .............................. CTTCCAATAACCTTTAACAACCCATTTTTAACAGCA 43891 30 100.0 36 .............................. TACAAGGCGAAATCATCATCCGGGTTCCCAATCTAT 43957 30 100.0 35 .............................. CAAGTACCAGAAGGTACTATATCAAAGGATACTGC 44022 30 100.0 34 .............................. ACATCATGACCAAGTATTTTAGCAGCAGTCTTAA 44086 30 100.0 36 .............................. AAGTAAAGCTTTGGAAGATACCAAAGATTTTAATAA 44152 30 100.0 35 .............................. GCAAGTAATATCGTGGTGGGCTCGTGTGTATCAGT 44217 30 100.0 36 .............................. TTTCTATGTTAGGAAAGATGGGTCAGTATATAGAGG 44283 30 100.0 35 .............................. TAGCTGTATCTTTTCTTAATCATTTCACCTAGTAA 44348 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 285 30 100.0 36 ATTGAACCTTAACATGGGATGTATTTAAAT # Left flank : AAAATATTTATCTCACTTTCAAAAATCAGTATTTCGTGGTGAAATAACAAATTCTAAGTTAATACTTTTAAAAAAGGAAATTGAAAATATAATTGATCCTTCCACAGACTTTGTATGTATTATAAAGCTTATGAATGATAACATCTTTGAAGAAGAGACATTAGGCAATGGTGAATCCACTGGTGAAGACTTAATAATTTAACATTCTTTAAATTATGATAATCATGTTGTAGTTTCAAGTTATTGTCATAGCCATTACCTTCTTTTGTACATTAAGCATAGCATCATAAATCATCATATAAAACTTTCTTATTTATATAAATAATCATCCCAGCTAATTTATACGTCCAAAGCCATAAGCCCTAATGAATCCAACCTTTCAGGGCTTATATACTTAATAAATCGATAATAGATATTTTCCCTGGGATAAATTCTTCAGAACCCTTTAATAGGAACGATTTAGTGATATAATAGAAATAAGAAATGGCTTAAATGCTGTG # Right flank : AATCAATTTACACCTGTATAATTTACTTTTTCATAAATTGAACCTTAACATGGGATGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //