Array 1 525787-524222 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZWD010000001.1 Saccharibacillus deserti strain KCTC 33693 NODE_1_length_1357150_cov_180.545800, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 525786 32 100.0 35 ................................ GCGAAAACATTGCTGCTTATTACAAAAAAGCTAAC 525719 32 100.0 34 ................................ ATCGCTTGGTTACCAGATATCCAAGCAGCCTGGG 525653 32 100.0 34 ................................ TTCAAAGCAACATTAATGGTGTCGCTACGTTAGC 525587 32 100.0 34 ................................ AATGAGACGGTAGGAGCGTGAACGATATGTTGAG 525521 32 100.0 36 ................................ CCGGCAATCGCCGCACATGTAACGGCCCATGCCCGG 525453 32 100.0 39 ................................ CTGATCGCCAAAACTTAATATTATCAATCAAAGCATCAT 525382 32 100.0 35 ................................ GTATACGGATAATTGCGTATTTAGTATTGAAGAAG 525315 32 100.0 34 ................................ CAACGCAGGCCGACCGGGGTCATTGGTCGCGGGC 525249 32 100.0 34 ................................ TTTTTGTCGTCCGTCATTGGGTCTTCACACTCCT 525183 32 100.0 35 ................................ GCGGAGATCGGGCGCCTCGACCAGCAGATAACCGC 525116 32 100.0 34 ................................ AAACGCAAATCAGCGTACAAACGGGCACCAATAC 525050 32 100.0 34 ................................ GAACAGGGCATGGCCAATGTTTATTCGGTTATGT 524984 32 100.0 34 ................................ GTTTCGGCCGCCCGAATACGCGTTGCGCTCGACC 524918 32 100.0 35 ................................ CTATCTGTTGAAACATTGGGCTTAGCAGATTCGTT 524851 32 100.0 35 ................................ TTGTACAACATTCAAGTCAAGTACCATAATGGAGT 524784 32 100.0 35 ................................ GAACTCGATTTGACGCCGGGTTATCCGCAGTATCA 524717 32 100.0 34 ................................ GCCCCATACGCGATCCAATACATCGTCGATCGTT 524651 32 100.0 35 ................................ CATGATTCGGGCTGATGACCCCACCCCAATTACAA 524584 32 100.0 34 ................................ TTCGACGAGGTTGCGCTGATGCCGCGCTCGTTCG 524518 32 100.0 34 ................................ AACTGCAACCCGGCGGGACCGTATCACTGGTTTA 524452 32 100.0 35 ................................ TCGACGATCTCAGAAGGGTAGAGGTGGGAGTAACA 524385 32 100.0 33 ................................ ATCTTCCGGTAGATCCTGCAATTGCAGAATCTC 524320 32 96.9 35 ..............C................. AAGCCCGAGCTTTTTTCCTTCATAAACGACTTCCG 524253 32 90.6 0 ...........................A.T.T | ========== ====== ====== ====== ================================ ======================================= ================== 24 32 99.5 35 GTCGCTCCCCATGCGGGAGCGTGGATTGAAAC # Left flank : CTCGAATATAAGTCTGAAAAGCTTCGGCATATTTTCCCAGATCGTGCAGAAGACCGGCCAAACCGGCGATATGCGCGGCTCCGATCCGGCTTCCTATCTGTTCGGCCGAATCCCGGACACGAATCAAATGATTCGCGAGAAGCTGTTCCTCTTTGTCCGATTGGCGAATATGTGCGATGTATTTCATGCTTGGCCCCCCTTGTCGAGAACGTCTTTCTCCAACTATACACGCATCCCAATATAAAGATCACTAACTAAATATTCTCATCTGCTACTTAATATTTCTCACTTTCTGGAGGTAAAAGGGTACGCGTTTATACGTCAGCCGAAAAGTGCGAACGTGAAGCTCCCATAAAATCCCCGGGAGGTTCGCACCCCGTGCGGTATAAGGGATGAGATCGTTTTACTTGTGTTTTTGTATCGGTTTATGTAGGCTGAATTTGAGGTTCGCACTTTTAAGCTCTGGAAGTCTTGCTGGGCTTGGTTTAAAAGTGGGCGCA # Right flank : TTTTTATTAATCGCCCAGGCGGCTGCGTTGAGAAGAGCATAGATTCAAACAAGCCTAGTGATACATTTGAATCAGTCAGGTTTGTTGAAGCAGCTCAATAGAAATAGCACTTAACGATAAGGTCATCCAAACGCGCCAACAAGATAGACTCCCATATGATATTTTTCAATAAGATGGCTTTGACATAGAGATTTTAGAGCCAAACAGCCTTCTATTAATTGGCGGACGGCTTAAGAGAGCAAGGGAATCACAGGTCTTGTCGATGCCAGTGAGCAAGCTTCCCTACGTCCTTCCACACACGAACTCACCCTAAAAGAACAGATCACCCAGCTGGAAACGGAACTCAAATGGCAAGCCAAGAAGCCGGAATCCAAGTAAACATGAGGTAGAACTTGGAAAAACTCAGAAGATCACGAATAGTCCCAACTCCAAATGCAAGGTACGGTGGCTGTGCCTTCTCACTCAAGTCTCCCGCCCAGGCTACTAGACAGCTGTATGAT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCATGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 533707-532680 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZWD010000001.1 Saccharibacillus deserti strain KCTC 33693 NODE_1_length_1357150_cov_180.545800, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 533706 31 100.0 37 ............................... CGGCGCAGCCAACGCAACCGGAACAACCGCATGAGCG 533638 31 100.0 36 ............................... ACGGCCCAAGCCGGACCGTTGTTAGAAAACGCCGTG 533571 31 100.0 36 ............................... AGCAAAAAACTCCGCATCCGTGTATCCGTAATAATG 533504 31 100.0 35 ............................... GGGATAAGTTGATCCGCACAGCAGGATCGTGGCAG 533438 31 100.0 35 ............................... GCAGGCTATCCCGAATTTAGTTGCTTTAGGCTATG 533372 31 100.0 35 ............................... AAGAATTTCGAAATCCGTCCAGGCACCGAGAAGAG 533306 31 100.0 35 ............................... ATGCACGGAGGCACGCTCTGGGGACTGATGTGTGG 533240 31 100.0 36 ............................... CAGCAGTCGATGCAGATTTGGAGGTGCAGGATCAGG 533173 31 100.0 34 ............................... TCCTCGATCGCTACGACGGTTATGGTCGTTATCG 533108 31 96.8 35 ....C.......................... GGATTGTCCGTTACCGGCACAGGGTTAAATGCGCG 533042 31 100.0 34 ............................... GCTTCATATTGTCCTCTTGTCACCCACAATTCCG 532977 31 100.0 35 ............................... GTTGATCCGGCTGCCGATCGCCTCGTCGTATCCGG 532911 31 100.0 36 ............................... TGCATGACCGAATTGAAGGACGACTCGACGTCAGCG 532844 31 100.0 34 ............................... CTCTTGCGCTTTTGCGGCTGCTGCCTTTGCTGTG 532779 31 100.0 38 ............................... CAGAACGGGTAATCGTACATGCCTTCGAGGCGCATAAG 532710 31 93.5 0 .............A........A........ | ========== ====== ====== ====== =============================== ====================================== ================== 16 31 99.4 35 TCGCACCCCGTGCGGGTGCGTGGATTGAAAC # Left flank : TTGAAATTTCCGATTTGGTATTTAAAATCCGAATCACGTCGCTGCTCGGAACCTTGGGATTATGATAAATGACGAACGTTCGCGAAAAATGATTCAGGTAATCGGCTTGATGCGATTTTGGAGACAGAATCAGCATCTTGCGCGACAGCTCGGTCTGATACAGATCGAAGACGTCCGATTTGCGCGATTCGTCGAGCGCGCTGTCGAACTCGTCCAATTTCAAAAACGAATGCTATCTTGATCCCCTATTCTCTCAGCAAGTTGGTAATCTCTTCGTTTTCCGTAATCCTTTATTTGATAACACTTTAGAGGAAGAGCAAGTCTTGCAAAAGTGCGAACGTGAAGCTCCCATGAAATCCCCGGGAGGTTCGCACCCCACGCCACATAAGGGATGCAGCAATTGCCCTTGTATTTTTGTCCTATTTTGGGTAGGCTGATTTTGAGGTTCGCACTTTTGGTCTTTAAAAGTCTTGCTGGTTAAGGGCCGGAAGTGGGAACAG # Right flank : AGTGCCGTTCTGGACGCCACTGTTCAGCACAAGAAAGCCAGATACTCCATAAGGAGTATCTGGCTTTCTTTATGTATACTTCGATTCATACTTTCGGAAGACCAGACAAAAAGGCTGTCGATATTTTTCCGACAGCCTAACCTCGACTAACCCATTATTCTTTTTAGGCTCTTACAAGATAGCAGAACTTCCCTAGCTTACAGCCCGTCCAATACCTCAACCTTCAACCCGTTCAATTCGCCCAACTCTACTTTGTAATCTTCAAAAGCTCTCGGCTCATCCATCTGCGTGGTTACCTGGAGCAGCCGATGTACCTTCGCAGACGAATACTGGCCGAGCTTGGAGCTGTGTTCCCACCAGTATACGTTGTGCACTTCCATGCTGCCGTCCGGTCTGGCAGAAGAGACATCGTTGGCGAACAGCGTACGCAGAGCTTCCTTGATCTTCTCCGCATCCTCTAGCGTAAAGCCTGTTTTCTCAGCCAGCTGCGTGTTGATACT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACCCCGTGCGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.60,-5.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //