Array 1 47918-47351 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACAQX010000050.1 Pseudomonas gingeri strain IPO3769 IPO_3769_S42_L003_contig_50, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 47917 28 96.4 32 ............A............... TGACCTATGACGGCGTGACGTACGGGAAAGAG 47857 28 96.4 32 ............A............... TACAAATACGATTCGGACAGCTACGGTTCGCC 47797 28 100.0 32 ............................ AAGCCACGTATTGAGGGCTTGCCATTTACCGC 47737 28 100.0 32 ............................ GTCGGCCAAGGATCCGGTCGGCGCAGTCATCA 47677 28 100.0 32 ............................ AACCAAACGATTGACGGCGTGCCGCGTGATCT 47617 28 100.0 32 ............................ TATTTGAGCCTGTACCATTTTGGTACCACTAA 47557 28 100.0 32 ............................ TGGTCAAGCGCCTTGGTGACTTTCAGGAGCCG 47497 28 100.0 32 ............................ TCCAGCGCACCAACATCGCAGGCATCCCAGCA 47437 28 100.0 32 ............................ CTCCCCCTTCAAAGTCAGCCGCTATAGCGGCA 47377 27 92.9 0 ......................-....C | ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.6 32 GCTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : TCAGGTCGCCCCTGATTCAAAAAAGGAACAGTACCTTTTCTGAATCACCTTTGGACATGTCCGAAATATGAAAATGTGAGTGACCTCAGAATCGTCACGCGCCTAGGGCTTCCATCGGATCCCGACCGAAGGCCGTGGCGACGTACATGTGATCTGTTCGCGGCCTCTCAACCGGCAGAGGAAACGAAGGTAATGACCGTGCTGGCGATGGGGCAGAGGAACACTGCGGGCCGCCAGCGTCTCGCAAAATCCCGAGTGGGGCATGTGCGCCGGGAGATGATGAGCCGCAGCTTCACCACGCGGCTGGATCAGCTTTGGCGGGTGTCTTGTTGCTGAGCCCAGAGGAGGCGTCACGAAGTGTCATGGCTGACCCTCTTTTTTGGGTGAGATCCCGCCGCTAATAAAATCAATCACTTACGGAACGGCAAAAAAAGAGGGGTAAACTGGTAATTGTTGGGGATTTGCCTTTGCAGGCAGAGCCTTATCACCGAAAGTGTCTA # Right flank : GCACTCATGTAGAGGCGAGCCGGGAAATCTGTCGCAATACTCTGCGCGAGGTGACGTCAGGAGTTGCTCGGCGCAGGTCGATTTCACGGCCACCGTCATGCCCTGATCGTTACTCCCCTTGGTAACGACCTTCTCTGTGGTTTATGGAGAGAATGAGATTGAGTGTGATGGCGCTCAGTACAGACCACATCACCCGGCTGGGTTCGATAAATAAAAGCGCGCAAAGCACGATTGAGCTGTCTGCCAACATCTGGATGTTTCCGGCACGCCAGCCGAATTTGTTTTGCAGATAGAGAACGGCGATGCCAATGCCACCAAGACTGGTGCAGTGGCGAAACAATACCAATGTACCGATTCCCAAAAGAATCCCGCCGTTGATACTGGCGTGCGCCGGGTGTACCCAGCCGATAGTGACCGTCATGGGGATCAGGGTTGTCATGAGTGAAAGCAGGGTGACCGCGCTGAATGTTTTCAGCGTAAACGCAATGCCCATGCGCTTT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : GCTCACTGCCGTATAGGCAGCTCAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //