Array 1 55682-58215 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV787019.1 Corynebacterium sp. HMSC11D10 Scaffold105, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 55682 29 100.0 32 ............................. CCGCCCAGACCAACCAGCGTGATGTCGCGCTC 55743 29 96.6 32 ............................T TGGTGGGTGACCCCCACCAATTGGCAGGGGTC 55804 29 100.0 32 ............................. GGTGAACGTGATCATGGGCGCTCCGTTCCGTC 55865 29 100.0 32 ............................. ACGTAATCCTCTTGTTTCCCGTAGCGGTCTAC 55926 29 100.0 32 ............................. GGGTTACGCAGCGCGTCAGCGACGTATTCGAG 55987 29 100.0 32 ............................. GGGCTGATCATCGAATGGGTACAGAACCCAGA 56048 29 100.0 32 ............................. TACCCACGCAATCTTGCGGGCCTGCTAGAGGT 56109 29 100.0 33 ............................. GCCCCCCTTACGAGTACTGGTTGTTGACCGGCA 56171 29 96.6 32 ............................G ATCACCTTGCCGGTTTTCGGCTCCCCCTTGGA 56232 29 100.0 32 ............................. CATGGAATTCGAGTTCACCCAGAACGCGAAGC 56293 29 100.0 33 ............................. GCACCACGATCACGAACGCGATAGTGTCCGGCG 56355 29 100.0 32 ............................. AGCGTTCTGGATGTGGCGTGGGTACTGCTACC 56416 29 100.0 32 ............................. AGGCGTGTGGCACCAATCAGCATCAAGCAGAG 56477 29 96.6 32 ............................A GTGCTGCGTTTCATGTCGAACGTTCGATATAG 56538 29 100.0 32 ............................. AGTGCGTCGAGTTCATCGCGGGTAAAACCCGT 56599 29 100.0 32 ............................. TGTTGGTTACCTCGAACGCGGAGGATGTGCAG 56660 29 100.0 32 ............................. AAGGACGAACCCCACGCGGCACCGTCCACATC 56721 29 96.6 32 ............................G ATGCCGATCGCACGCATTGAGCCGGGTGAGTT 56782 29 100.0 32 ............................. CCAGGCGGTGGTGTGAATGGGCCTGCGGAAAA 56843 29 96.6 33 ............................T CGGGCGCCGGAAGGCAGTACGACTACCCCACCG 56905 29 100.0 32 ............................. ACGGCGTTAGTAGTAACGCAAGTTTAGTACCA 56966 29 100.0 32 ............................. GGGTTGCCGGGCTTGGGGCCGGACAGGTGAAC 57027 29 100.0 32 ............................. TCCGCAGGCCCGCGCTTCGTATACCCATCAGC 57088 29 100.0 32 ............................. CAAAGGCAGCATCCGCGGAAAACACCGTCGTT 57149 29 100.0 32 ............................. AGGTCAATTTGGCCCGCTCGGGGGCGCATTGG 57210 29 100.0 32 ............................. AAGCCGACATTAACGCGCGCCTTGCCGCCGAG 57271 29 100.0 32 ............................. GTGCGTGGCGACGGGCGTAAGACCTCCACCCG 57332 29 100.0 32 ............................. GTGCCGAGCAGGTAGGCGACATTGTGGGCACG 57393 29 100.0 32 ............................. GCAGCCACCGACTGGCTGCACACGTTCACGGT 57454 29 100.0 32 ............................. TTCGAACTCATCCTGCAAAACGACCCGCGCTT 57515 29 100.0 32 ............................. CCCACCATTGGCAGGGGTTAATGCCGTCCGGG 57576 29 100.0 32 ............................. CAGTATGACTACCGCAGTAACCTCGCTTGCGG 57637 29 100.0 32 ............................. TCGGATGCACCATCGGGCATGTTCTGCAAATC 57698 29 96.6 32 ............................G TGGAAAAGGACCTCGCGGTCTTCAAGCGTGCG 57759 29 96.6 33 ............................G TCCCTGGACTGTGCCGAGCGACAGTCCGAGGTG 57821 29 100.0 32 ............................. GCACAGCACATCAGCCACGGCGGCGTCGACGA 57882 29 100.0 32 ............................. CAATCCGGCACGACCGCAAACAACTGCCCGAA 57943 29 100.0 32 ............................. TTGGAATAGACGCGCACACCATTGATTCTTTG 58004 29 100.0 32 ............................. CGCTGCTGCACGGCTGCGGTTCCGGGCATGCG 58065 29 96.6 32 .............G............... AGCCAGCCGATCAGGAAGCCACCACGACAAAA 58126 29 93.1 32 .........T...G............... TCGAAGCCACGGACAAGAAGGCACAGTCGCTG 58187 29 82.8 0 .............G.........A..TGA | ========== ====== ====== ====== ============================= ================================= ================== 42 29 98.8 32 GTCTTCCCCGCATACGCGGGGGTGGTCCC # Left flank : TATTATCACCGACGACCCAGCCCAACGGACACAATCACTTTACGACCCCACCATCGGCCTCGTGGATGGCAAAGGGACCGGAGGACTCGACGTCAACCCAGACGATCGCTTCTCTGGTGATATGGATCGGCGATACTCCGAAGACCATCTGGCCTGGGCAATCGCAGGCATAGTTGCACTCGGCATGCCAGGTAACGAGAACGGGTCCGGTGTCCGCGATAGGCAATTGACACTGACCGCGCCTACCGAATGGTCGACCTTGGAAGAGATCCAAGACTTTGTCATGAGTCCCATTTCGACCTTGCCGACGTACAAGTGGCGTGACCAGCCCACCCGGCAGTCTGGCCAAATCAAAGTATGGGAGCCCATCATGGACAGTTCTTAATGCCCATACTGCCACGGTTATGTTCCGGTTTAAGCGCGCCTCTGACCCTGCCAAGCCGCTGAAGCAGTCGTATCTAGAATGGCCAGTGTCGGGACATTGTTCCAGGTCAGCGAGT # Right flank : AGTCGAAAGGTTACTGACGATGGCCGCCCCACTATTTTCAAGCGCCCACCATCAGCAAGCGTTACACCACACTAAGGGACGCAACCGTACTGCACCGATGCCGACGAGAAGTCCAATAGTTTCCTCGCTCCTAGGGCATGACCTCCAAAGGTTGAGTTTGAGGTACGCCATAAAACGCTCCAACATTCGCCAAAACGACTCGGGAGCGATTTGGGGGCTCGCGGCTAGCTGATCAGCCCGCTGCTGCGCCAAATCTTGAGCATCTTGGGCCGATTTTTGTATCGGATGGCTAACTCTTCCATCTTTTCCAGCACTGCCTTACGTACGACTGGATCGGCCGGGAAGCAGTCGATGATCTGCATCGCCGATGCGGCAGCCTGCTTGTACGGCCTGTCGCCAGTTGCCCGAACAATGTGCTCAGGTTCTCTGAGCATGATTTCCAGTGCACGTTCCGGGTCGTGACTGGATAGCACTGAACGGGCGAATTCAAATGCAGAGTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCATACGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //