Array 1 2175143-2164304 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ454941.1 Bacillus sp. FJAT-42315 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 2175142 32 100.0 34 ................................ TTGAGTAGGTAATACATTGGGATTGGACAGTTTT 2175076 32 100.0 34 ................................ ACTAGGGGGTGACCAATAATGGCTAACTTATACC 2175010 32 100.0 34 ................................ AATATCTCCTTTCATACTCTCCTAAAATTACTGG 2174944 32 100.0 34 ................................ TGTTGCTGGAAAATATTCTTTTCCATCCATAGTC 2174878 32 100.0 34 ................................ ATATCATGAATGACGAACTATCTGCTCAAATATT 2174812 32 100.0 36 ................................ CCAAAGAGTATCTGTCATAAGTAAAATTGTATTATC 2174744 32 100.0 35 ................................ GGTTCTACAAAGGTAGAAGACATTAACCGCTCGTT 2174677 32 100.0 37 ................................ TCGACACGGTGCCGCTCAACTTGAAGGAAATCATCGC 2174608 32 100.0 33 ................................ ATATGGCGTGGAAATACTTCAAAAGGTATTAAC 2174543 32 100.0 34 ................................ ACATTATTGGGTGGCTTTTTATCGGCTACCCTTT 2174477 32 100.0 34 ................................ CCAAAGAGTATCTGTCATAAGTAAAATTGTATTA 2174411 32 100.0 34 ................................ ATACTCTCCTAAAATTACTGGGAATGTTTCATGC 2174345 32 100.0 36 ................................ TCCGTTTGTGTTTGCTCTATCTAAGCTAACGTATTT 2174277 32 100.0 34 ................................ GTTAATATCCATGTTTATTCCTCCTATTATCCAA 2174211 32 100.0 34 ................................ TCCTTGCAGCAGGATAGATAATACTTGTTTTTGG 2174145 32 100.0 34 ................................ CTCCTATGATTTAATAACTTAATTTTACCACTAT 2174079 32 100.0 34 ................................ TAAAGTATAATTTTGTGCCGCATATTGTTTAATC 2174013 32 100.0 34 ................................ ACCTATGCTATTTCGGTGTTTTATAACCCTAATA 2173947 32 100.0 35 ................................ AATAGACGAACTACTCGACGAAATGAATGACTTGG 2173880 32 100.0 38 ................................ GGTATCGAATGTTTACAGGCAATTGTCAAAGACATCCC 2173810 32 100.0 34 ................................ AACGCTTGACGCTTCGGCGTTTTCCGATACTACA 2173744 32 100.0 33 ................................ TTTACTGTATACTTTTTCATCCGAGGCGCACCG 2173679 32 100.0 35 ................................ CCCGAAAGGAGGATCGTATTTGTCCGAAAATAAAC 2173612 32 100.0 34 ................................ TGCGTTTTCCAAGGCGTGGCGTCCGTTAGTTCTT 2173546 32 100.0 33 ................................ CGACGGGTAACGTCTTGTCTGCGTTATTACTAC 2173481 32 100.0 34 ................................ CGCCAATCCTTAGCGTTTGTTTTGCTCATTCGTC 2173415 32 100.0 33 ................................ TTCCGGCGCCTCATATTCTTCGCGCGGGATATC 2173350 32 100.0 35 ................................ CGAACGGTAATTAGTCACGCAGGAATTGAAGAAAC 2173283 32 100.0 34 ................................ GCCAGTAATATTGTCGTAATATATTTTACTTCCT 2173217 32 100.0 33 ................................ TTTGCACGTTTGGCGCAGCGGGGAAAAATCTAT 2173152 32 100.0 35 ................................ CGAACGGTAATTAGTCACGCAGGAATTGAAGAAAC 2173085 32 100.0 34 ................................ GCCAGTAATATTGTCGTAATATATTTTACTTCCT 2173019 32 100.0 33 ................................ TTTGCACGTTTGGCGCAGCGGGGAAAAATCTAT 2172954 32 100.0 33 ................................ TTTGCACGTTTGGCGCAGCGGGGAAAAATCTAT 2172889 32 100.0 34 ................................ ATGCGTGCGTAGTAATCGCGGACTATTTCCGTAT 2172823 32 100.0 34 ................................ CGCGAAAGACGAGATAGCGCCGATACTTACGTTG 2172757 32 100.0 34 ................................ ACTTTGAATTTCACCGCAAAATGACGACGCTTAG 2172691 32 100.0 33 ................................ CCTGATGTCAGCCTTCGCCTTTGCTACGATTTC 2172626 32 100.0 34 ................................ AATATTTAACGGAGAGCCGGAGGTGGCGGAAGGT 2172560 32 100.0 37 ................................ TACAACTTAGCGCGCAATCAGAAGATGGTCGCTACTT 2172491 32 100.0 35 ................................ TCTAGTTATAGTACCGCATGAGAAGATGGTTTTTG 2172424 32 100.0 35 ................................ ATTTCGTATCGCACCGCCCGTATCTTCCGCCAGAT 2172357 32 100.0 34 ................................ CCGAAGGCGATGAGAAAATGACGATTGTGATTGA 2172291 32 100.0 34 ................................ GATAATCAATTGACGATTGTTAATGCGCGGGCAG 2172225 32 100.0 33 ................................ TTCTGTGGAAAAACTGGGACACTGTAAAAGAAA 2172160 32 100.0 34 ................................ TAAATCTAACGAGGATCGTAAAACGCAAGTGAAG 2172094 32 100.0 36 ................................ ATAAAATAAACGAAGAAAGGAGGCGTTAGGATTTGG 2172026 32 100.0 33 ................................ AAGGCAAGCCGGTATTCAGACTCCATGCGGAGC 2171961 32 100.0 33 ................................ GACCATCATAGAACGCAAACTCGCTTGATCGTC 2171896 32 100.0 36 ................................ GTTAGGGCAAACGGATAGGGGCGCCGGCGGGTTCGG 2171828 32 100.0 36 ................................ ACCAACGCACACGTAAAGCGCTACGGATTGAGGCGC 2171760 32 100.0 36 ................................ ATACCCGTTGACTAGTGCGCTCATTAGTTCGTCAGA 2171692 32 100.0 36 ................................ AAAGCAGTTAAAAATGGCGCAGACATTTGAATATGT 2171624 32 100.0 34 ................................ AAGCGGTGAATTTGCGCCGTACGTCGCAGGTCTT 2171558 32 100.0 34 ................................ CAGCTATTCGCACTTTAATCGCTGAATACGAAAA 2171492 32 100.0 34 ................................ TCGAAAACAGCAGAGTTGATCGCTAATCATGTAA 2171426 32 100.0 34 ................................ TCTATTGATTTTTACCGATATGTTGACTCTCGCT 2171360 32 100.0 36 ................................ AAGGTAGTTAGAAACATTACCTAGAAAGAAGGTGAC 2171292 32 100.0 34 ................................ TACATAACCATTCCCCATTTTTTCACGATCTTCT 2171226 32 100.0 33 ................................ TGGAGCTAAGTTACGTACTCAGTTAGGATTGAC 2171161 32 100.0 35 ................................ TCTTTCAAAAGTACTTAATTCTTTCGCTGCTACTT 2171094 32 100.0 34 ................................ ATACGAAATGGACTCAAAAAGGTCGTCTGTTTAT 2171028 32 100.0 34 ................................ CTCTAGCTATTTGTTTATTTTTAACACGCCAATT 2170962 32 100.0 33 ................................ CATTCAAACAAAACACTATTAGGAGGAATTTTA 2170897 32 100.0 35 ................................ CGGAAAGCCGTGCAATTAACGTTTTGAGAACTGAG 2170830 32 100.0 33 ................................ TAAACATAAGACTTTCATAATCTGCCCCTTCGC 2170765 32 100.0 34 ................................ AAATCAATTTGTAGCGCTTCGTATGCTGCTACTA 2170699 32 100.0 35 ................................ CAGTGTTAGAAGCGATATTCGAAGTCATATTCAGC 2170632 32 100.0 33 ................................ TCCTCGTAATAGTTGTAGTAACTCATTTGTTTC 2170567 32 100.0 35 ................................ CTCTGGAACGGTACGCGCACAGACACGAATATACT 2170500 32 100.0 35 ................................ TTGCCGTTGATCATTTGAACGTATTTTCGGAATTC 2170433 32 100.0 36 ................................ CGTAATCCTGCGCTAACACACCCGCCCCAAAGGAAG 2170365 32 100.0 35 ................................ CTACATTTATAGGAGACGCGGAATCGTTATAAATC 2170298 32 100.0 35 ................................ ATTTTTATCTACGGTTTACCCTCCCATTTTCCAAC 2170231 32 100.0 34 ................................ CTCAAGCTTTTTAGACTTGTTTAAATTGAATTGA 2170165 32 100.0 35 ................................ ATACTTAGGTTTTGGCCCCTGTATTTTATAGTCAC 2170098 32 100.0 34 ................................ CTCACCATTAAACGGCAATTCTCTGTCACACCAA 2170032 32 100.0 34 ................................ CTCACCATTAAACGGCAATTCTCTGTCACACCAA 2169966 32 100.0 36 ................................ TCCCATTGAACTATGAATAACTATAGTATCCTCATT 2169898 32 100.0 35 ................................ CTTTATATATGTTGATCCAGTGGCAAGAACAGGGC 2169831 32 100.0 34 ................................ CTCACCATTAAACGGCAATTCTCTGTCACACCAA 2169765 32 100.0 36 ................................ TCCCATTGAACTATGAATAACTATAGTATCCTCATT 2169697 32 100.0 35 ................................ CTTTATATATGTTGATCCAGTGGCAAGAACAGGGC 2169630 32 100.0 34 ................................ TTGTTGCGAACAAGCAAACAGCTGGATACGGACT 2169564 32 100.0 34 ................................ TGTTGCCAGACAGCTTAAATACAGATCCGAACCC 2169498 32 100.0 35 ................................ GCTGTAGATGAAGTAGTTAGACGTCGTGATGCAGC 2169431 32 100.0 35 ................................ GAAAAGAACAGTTTTTTGAAGCTAGGAAGGTGGGT 2169364 32 100.0 36 ................................ AAAATCACTCGATACTCACAAAACTCCCGCAAGCGA 2169296 32 100.0 33 ................................ TATTCTTTATCTTTGGACTGAAAAAGGTGCTTG 2169231 32 100.0 35 ................................ CAGTTCCCATTTCCATATAAAATGCACCGATTTTT 2169164 32 100.0 34 ................................ ACAACGAATAGAGAAATAATTTCACAAAATGAAT 2169098 32 100.0 34 ................................ ACAACCGCCGTTCGAGTTGGCAGCCGATTGGTGC 2169032 32 100.0 33 ................................ AAAGAAAGCTAAATTTTAAAACGTCAGGCATAG 2168967 32 100.0 35 ................................ TTTTTACCTCCTTGCTTACTGGATCGTTGGAACTG 2168900 32 100.0 33 ................................ TTCCACAAATAAAGAAGCGGATATTTACATGTA 2168835 32 100.0 36 ................................ CACTTGGGTCTGTCGTGCACGTCAAAGTACCAGGAA 2168767 32 100.0 33 ................................ CATACCATTTGCCGTACTCTCAATAACACCAAT 2168702 32 100.0 35 ................................ CAACATCACTTTTTCCGCTTGTGACTTGCTCATAG 2168635 32 100.0 34 ................................ AGGATGGCAAGTTAGTGGAGGACCCGCATAATCG 2168569 32 100.0 33 ................................ CCCAAGCGATCGTTGGAATATAAGATTCTTTTC 2168504 32 100.0 33 ................................ TACTGGCATGCCACCATTAGAGCAATAGTTGCA 2168439 32 100.0 35 ................................ TACACAATATATTTCAGACTCTTCAGGTTTTTTAC 2168372 32 100.0 34 ................................ TCGACATTGATGGGAACAATCTCTGAAATAAAAC 2168306 32 100.0 33 ................................ AGCGAAAGATCGATCGGATTACAGAAGTGCCTA 2168241 32 100.0 34 ................................ TTGATGCAAATGTGGTATCCACTTCACCTTTAGA 2168175 32 100.0 34 ................................ GAGCGTCTACGCCCGCTGAACCGCCTAACTCTGC 2168109 32 100.0 34 ................................ TAGTGTGTATCCCGATAATAATACGCCAGAAAGG 2168043 32 100.0 35 ................................ CAAAATTTCAGGAAGAACAGGGAGACGCGACTTCG 2167976 32 100.0 35 ................................ TCGCCTTTTTCTGCTGCATCCCACATCTGCTTGAA 2167909 32 100.0 34 ................................ ATCTGACCAACCGAATTTAGACAAATCAATCACA 2167843 32 100.0 33 ................................ GATGAAGAATATTTAAAAGCTGGATTTATTTTC 2167778 32 100.0 35 ................................ CGGTGGTCTTAAACAGTTTGCAACAGCAACAGAGC 2167711 32 100.0 35 ................................ TGTCATTCTCTCTAAATTAATTGCTGCATCTTTCA 2167644 32 100.0 35 ................................ TCTAGCATTATGACTCGCGGTCGAACCGTAGCAGC 2167577 32 100.0 33 ................................ ACAATGATGCTCTGTTTCTGGATGATTCACCTG 2167512 32 100.0 35 ................................ AACTGTTACGAATGCTCCGATCGGTGCTCTTCCCT 2167445 32 100.0 35 ................................ TATTTTTGCACCAGCGGAATAACATTACCATCTTT 2167378 32 100.0 34 ................................ ATTTGGATCATTAAAAAAGGTAGTAACAAATACG 2167312 32 100.0 37 ................................ GACTGTTACCGTTTTATCACGGGCATCAAACGTTAAC 2167243 32 100.0 35 ................................ CCATGAAGATTTATTTGCGTCGGGAGGTAAGAACT 2167176 32 100.0 33 ................................ ACATAAGGATTGCGATCTGGAACACAGTGATTC 2167111 32 100.0 33 ................................ TTCCCATAGGACGAACCCCTTTTCCTCCTGCAT 2167046 32 100.0 34 ................................ TGTAAACAGTCCAGACTTCTTGGCCCATTCCGCG 2166980 32 100.0 34 ................................ AATTGGATCCGGCTATCTCTCCTAACTCTATTTT 2166914 32 100.0 34 ................................ AAAAGTCTGGCATTACACCGGACATTGTTGTCAT 2166848 32 100.0 34 ................................ ACAAAGAAGAATATTTTGAAGTTAAAGTTTGCTC 2166782 32 100.0 33 ................................ CATGCGCTAGTTAGCGCAACGGATGTAAAAGGA 2166717 32 100.0 35 ................................ ACGGCACTTATCCACAAGGTGACTGCCCCTTGCTC 2166650 32 100.0 34 ................................ ATGATATGTATGGATTAAGCAAGGGAAGGTAGAT 2166584 32 100.0 34 ................................ TATAGCTTCAACCATTTCATTCGGGAATGTAACA 2166518 32 100.0 35 ................................ ACCTAATTGTGGCACATCCGTGTTAGCTTTACTCG 2166451 32 100.0 34 ................................ CATAATCCTGCGCTAACACACCCGCCGCAAAGGA 2166385 32 100.0 34 ................................ ACAACGATCAATCAAAGCTTCAGTATTCTCAATA 2166319 32 100.0 35 ................................ ACCTCCTCTCAGGTCAAACATTATTTCCAAATATT 2166252 32 100.0 33 ................................ GAAAGTGGCGCAAGTGACAGCTTTGAACTAGAC 2166187 32 100.0 34 ................................ CGGAAACGCAAACGGAACAACTTGTGGAACTATT 2166121 32 100.0 34 ................................ CCTTGGTTTGCTATGCCAAGCTATCGTATGCCAG 2166055 32 100.0 33 ................................ TTTCAAGATCATCGATGCCGTCAAATTCGAAAT 2165990 32 100.0 33 ................................ CTCGTAGCTGTTATATCTGCGAAAGTTTGCATT 2165925 32 100.0 35 ................................ GACGCGCATTTTAAAGCGTACAGAGGGCAGAGGAC 2165858 32 100.0 34 ................................ AGCTCAGGTTGGTAAGTCTGAAATTGTGCTAAAT 2165792 32 100.0 35 ................................ GATTAGATAGTTACGTAAAGCTTCAGCCAAGTCAG 2165725 32 100.0 34 ................................ ATCACTCATCACCATCTAGCTCAATCGCTTTTTG 2165659 32 100.0 34 ................................ TTTTCTTATGTTGAACAGCTCGTATCCGAAATGC 2165593 32 100.0 36 ................................ CGTTGAAGACTGGACGCATAAGGCAACACAAAGAAA 2165525 32 100.0 34 ................................ TTGGGAAAATGGTAAAATTGATTTGAAAGCTTAT 2165459 32 100.0 33 ................................ GTAACTCCATCCACGATTATGCACTCGATCTCG 2165394 32 100.0 34 ................................ TACTATCTGGAACCAGACGTTTATACTTACATCG 2165328 32 100.0 35 ................................ TCCTGTTTCTTCGTCTTTTAGTACATCGTGCAACT 2165261 32 100.0 36 ................................ AAAAACGAAGGGAGAAATACAAATGGAAACTTTAAC 2165193 32 100.0 36 ................................ TCTATCAAGAAGCGCTCCATCTTGGGAAGCCCCCTC 2165125 32 100.0 34 ................................ AATCCAGTGACGAAATTGTACGAAAAGGCATAGC 2165059 32 100.0 34 ................................ TAAAGAATGTGTTGACGAATATGAAATGCCAGCT 2164993 32 100.0 36 ................................ CTCCCGATTCATTTTTGATGCGCAATATGCGTCTAC 2164925 32 100.0 33 ................................ GATACGATCGCACTACCAGTAGCAGATGATGAC 2164860 32 100.0 33 ................................ TAAGCTATTTTGGACATAGTTACTTATTTTATC 2164795 32 100.0 35 ................................ CTTACTGTTTCATCTTCGATACTTACCAAGGCCTT 2164728 32 100.0 34 ................................ AAAGTTTTAAGGCATACTGGGAAGGTTTTGTTGA 2164662 32 100.0 33 ................................ GCTATAGTATCTGCTGATGGAAGAGTTGTTTAT 2164597 32 100.0 34 ................................ ATATCATACTTCAATACTTTATGACGATGGAATC 2164531 32 100.0 33 ................................ CTTATACATTAGTTTTTATACCTGTGTTATTAC 2164466 32 100.0 34 ................................ TGCTTGATCTTGAAAACATCTGTCTCCATGCCCT 2164400 32 100.0 33 ................................ CACCTAGTGCATTTAATGCTTTTTCCGCTTCTG 2164335 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 164 32 100.0 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : CTAGATGAATATCCTCCGTTCTTATGGAAGTAGGTGAAACATTTGTTAGTATTAATCACTTATGATGTAAGCACTACTAGTAATACTGGGCAAAAGAGGTTGCGAAAAGTAGCAAAAACATGTCAAAACTACGGTCAACGAGTCCAAAATTCCGTATTTGAATGTATTGTCGATGCTACCCAATTTGCAGCATTAAAAATTGAATTAACTAACATTATCGACAAAGACCAAGACAGCCTTAGATTTTACCAGCTAGGCAATAACTATAAAAGTAAAGTAGAACACATCGGTGTAAAAGAATCCATCGACATAGAAGGACCTTTAATATTCTAGTGCGAACCTATAGTGCACATGAATTCTCCGGTGCATTCGCACCTGATATTTTTAGATTCTCTTTGTGATTTTGTAATATTTGTTACATTGTTCTTTATTTAATAAAGGAAATAGCGTGTTTTTGGATAGAAAAGGACTTTTTTAAGTTTTTTTACCCAAAAATCGCT # Right flank : TGATGGATGATGCCCATCGTCAGCAGCCCAATAGGACAGCATTAATGTAACAAGAGTTATTATGGTAATATATGGATAAAAAAATACTTCATCATGCGAATTAAAAAATCATGAGCATATTCTTATTGTTCTTTAAAGGAATTATCAACTGTTATTAAAAATATAGATAATCAAGTACAAATATGGACAAATACTCTAAAAAAACAGTTAGTCTTAAATTGGTTCTAGTCGTATCGTGATCATCTGATTCAATGATTTCGAAATCGGTATTCGCATTTCTTTACAGCATTCTCTCCATTGCTTAAGCCATTCATGATCAATGGCACTACGGATAAGGCTCCTTGTTTTCTCATCATCATAGATACTCTACAACTAATGTTAATTTATCCCAAACAACATCAATTATAGAGTATAATGAATGCAAGGTGGTGAGTAAATGAAGAAAGCCTATTTGATAGAGATTCAGCCGACAACCGAGCAGAAAACGAAAATACACCAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 3005480-3002074 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ454941.1 Bacillus sp. FJAT-42315 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 3005479 29 100.0 35 ............................. CTTAATGCAGTCACAGCATCCGCCACCGTTTTAAC 3005415 29 100.0 37 ............................. CTTGAAAGCGCGAAATCGGACAATGAATTTGGACATC 3005349 29 100.0 35 ............................. TCTTATCGTTGGATGATCTTACAGTATGGTGTTCC 3005285 29 100.0 36 ............................. GGAGTTACTAGGTTTTTAAAGTAAAGGGTAAAATGC 3005220 29 100.0 35 ............................. TCTTTTAATTCGTTAATCGCCTTTTCAAATTCAGC 3005156 29 100.0 35 ............................. TTATTATTTCTTTTGTTTTCTCATGTCGTAAAACC 3005092 29 100.0 39 ............................. TGGCTTCTCTATATCTATATCTACATTAGTATCATCATC 3005024 29 100.0 37 ............................. ATGATTACGACGATAAAAAAATCATGGAGTTTATAAA 3004958 29 100.0 36 ............................. TTATGATTTAGGAAACGGACCACTTCGATAAGCTCC 3004893 29 100.0 35 ............................. GGAGTAGCGGAGTTATTAACAGAGCGTGGATTAGA 3004829 29 100.0 36 ............................. AAACGTCTCGTAACTTACAACCATCATCCCGATAGA 3004764 29 96.6 39 .......A..................... GTAGTTGATGCTGATAATTAGTACAGCTCCACCGATATA 3004696 29 100.0 36 ............................. AAACGTCTCGTAACTTACAACCATCATCCCGATAGA 3004631 29 100.0 39 ............................. GTAGTTGATGCTGATAATTAGTAAAGATCCACCGATATA 3004563 29 100.0 36 ............................. GGTTTAGCTAGTGCATCTACTGGCACGAGCATCAGC 3004498 29 100.0 36 ............................. GGTTTAGCTAGTGCATCTACTGGCACGAGCATCAGC 3004433 29 100.0 35 ............................. CATCATTCATGCTAGACGTTACACTATCGCCAACG 3004369 29 100.0 35 ............................. CATCATTCATGCTAGACGTTACACTATCGCCAACG 3004305 29 100.0 35 ............................. AACGACAGTACACAGACAATCACTTATCCTTCAAC 3004241 29 100.0 35 ............................. ACTAACGAATGAAAATCCTGTTCTTCTTCGCTTGT 3004177 29 100.0 35 ............................. AACGACAGTAAAAAGACAATCACTTATCCTTCACC 3004113 29 100.0 35 ............................. ACTAACGAATGAAAATCCTGTTCTTCTTCGCTTGT 3004049 29 100.0 36 ............................. CTTAATTTCGCTGGCATAATGTTCTCCATTTTTACA 3003984 29 100.0 35 ............................. ATTGGCTTTAACACTAAATCTTGCTGTTACTGTTT 3003920 29 100.0 36 ............................. ACGTCATCTATACAGCATGGGAAACTACACGCAGCA 3003855 29 100.0 36 ............................. ATGAAGACTCTTTGGACAAATTCACCTATATTGATG 3003790 29 100.0 36 ............................. ACCCCGACTAAAATAATTAATAAAAATCAAAAATAG 3003725 29 100.0 35 ............................. TTGTTTTCTTCGATGAATTGATTGAACACTTCATC 3003661 29 100.0 37 ............................. ACAAACATACCGTCTTCGTCAAACATTTCATTTTCGT 3003595 29 100.0 37 ............................. TTTCCTTTTTGTAATATAGCAACCTGTATTTGCCGCC 3003529 29 100.0 36 ............................. ATGTCTTCGCTAGGGTTCCACTCCCGATGAATATCA 3003464 29 100.0 36 ............................. CTAAAAATATTCGCGGTCAAATCGCTTACGAGAAAA 3003399 29 100.0 35 ............................. TCTCAAACTGGTGGTAAAGTCATATTTTCGGGAAC 3003335 29 100.0 34 ............................. TGGGAAAGTATCGTCTGTACGAACTTTTAAGCAA 3003272 29 100.0 37 ............................. CTAATGTTTTCACACTCTTTAGATCGATCACGCTATT 3003206 29 100.0 35 ............................. GTTTGCGTGCATCGCTCACATAATCCATGTTGACA 3003142 29 100.0 35 ............................. CGCATATTCTGAGATCGGCATCAACCGACCTCCAA 3003078 29 100.0 37 ............................. GGATTTTACCTTCTTGCTCGATGTTGGGCAAGCTTTC 3003012 29 100.0 35 ............................. TTCACAAATATCAATAAGTTTTTAACTAGTCTAAC 3002948 29 100.0 36 ............................. AGAATCGGTCATGATTAAAGATATTAGCGGCATAGA 3002883 29 100.0 36 ............................. CATAATGCTATTGTTTTCTTGAGCTTTCTCAAACAA 3002818 29 100.0 36 ............................. TGAAACGGATCGGGAATATCGGCCACGTCTTAAAAC 3002753 29 100.0 36 ............................. TTATCTGTACTTATATAAGTTGCATAAGTCGTTGAA 3002688 29 100.0 36 ............................. AGTTTTACCAAGACCCGAACGGGCCGGTAACCAACG 3002623 29 100.0 38 ............................. TCAAATGTTACCCAAGCGTTTGGTTGTAATTCGCTAGC 3002556 29 100.0 37 ............................. CTCAATACTAAGTACTCACCTTTATTATTTATAAAAT 3002490 29 100.0 37 ............................. TATCAAGCGCATGAAGCCTTTTCTGGCACGTACTCCA 3002424 29 100.0 37 ............................. AACAACACCAAGGCGCTTGAACTTCTCTTGCATTTCC 3002358 29 96.6 36 ...................T......... TGTCTCCCCTAACCAAACTATCCAAGCAGGTCAACG 3002293 29 100.0 35 ............................. ACTATGGTAAAGGTGATTATCAGCGGATTTATAAC 3002229 29 100.0 35 ............................. CTACTATTGACGTTTTATTCACTGTCAATAATGTC 3002165 29 100.0 35 ............................. GTTGGCGGTACTGGTGTCGTGGTTGGAGTGGACGA 3002101 28 89.7 0 .....................-.A....G | ========== ====== ====== ====== ============================= ======================================= ================== 53 29 99.7 36 GTTTTATCTCAACTATGTGGAATGTAAAT # Left flank : AGCATTTTTTGAGAGATGAAGATTATAAAGCATTGAAAGCATGGTGGTGAGATATGTTTGTCATTGTTTCCTATGATGTGGATGTGAAAAGAGTAGCAAAAGTGCATAAAATATTAAAAAAATACTTAACATGGACACAAAATTCTGTATTTGAAGGAGAGATTACAGAAGGGAAATTAAAGCAGTGTATGGCTGAAATTGTAGAGAAGGCAGATCAAGAATTCGATTCTATTTATGTTTATCGAGTAGCCAATCCTAATCATATAAAAAAAGTGGTATATGGGGTTGAAAAAGATTTCGAATCAATGTTTTTATAATTTGCAGTAAAGCTCTTTTTTGGTGAAACGTGCTTGAACCCTTGGCCCCATTGACTTTCAAGCCTATTTGTCGAAGGTGTGCGATTCATGACTGCGGCTTTACGGCAATTTATGTTAAAATAGACTTAGTGAATCACTTACAAACCCTTGATATAAGTGCTTTTTTAAAACGACCAAGTGAGG # Right flank : AAGGTTATGCAAGCTAGTGTCTGCCAATAGAGTTTTTACATTCAGATACTTTGCTTTCCTTAAAATTTTGTATTCTTTTCCGAAACAAAAATCGATCATGTATGGGGGCGGTGTTGTCTAAAGCTTCTTCACCCCACACCAAAAAAGAGACAGCCCACGCTATCTCTTTTTTTCATCATCTTCTTATTCTACTTCCCAACACTTGCACACATTCTCTGCTCCAAGTAAGCTTCAAAGTCTTCACTGCATAGCGGCCTGCTAAATAAATATCCTTGTCCCTCGATGCAGCCGTCTTCGATGAGGATTTGGAGTTGGTCGGCGGTTTCGACTCCTTCTGCGATGACGTTTAGGCTTAGGGCGTGGACGAGAGTGAGCATGGCTTTGACGATGGCCCGGCTTTCTTTGTTTTCATGGATGTCTCGGATGAAGGAGGCATCGATTTTTAGTGTGTTGATTGGCAGTTCTTTTAAGTAGCTGAAGGAACTGTAGCCAGTGCCGAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTCAACTATGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 3 3014270-3017664 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ454941.1 Bacillus sp. FJAT-42315 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 3014270 29 100.0 36 ............................. TGCATCTTTCTCCCTGCATCATTAATAGGTGTCATT 3014335 29 100.0 36 ............................. ACCGTTTAGGTGGAGAGTTTGGTGTAACAGCAGATG 3014400 29 100.0 37 ............................. GGTTTCTTTCTGAAGATGGTGTATATGAAGTTTTATT 3014466 29 100.0 34 ............................. ATCCAAGGAACTGGAGCTTCGATGACACTTAAGT 3014529 29 100.0 36 ............................. TCGAACATGTGCACATCAGTATCAACATACATTGTC 3014594 29 100.0 34 ............................. GAAGCTATTGTCAGTAACTATGACGAGTTAAATT 3014657 29 100.0 34 ............................. ATCCAAGGAAGTGGAGCTTCGATGACACGTAAGT 3014720 29 100.0 36 ............................. TCGAACATGTGCACATCTGTATCAACATAAATTGTC 3014785 29 100.0 34 ............................. GAAGCTATTGTCAGTAACTATGACGAGTTAAATT 3014848 29 100.0 34 ............................. ATCCAAGGAAGTGGAGCTTCGATGACACGTAAGT 3014911 29 100.0 36 ............................. TCGAACATGTGCACATCTGTATCAACATAAATTGTC 3014976 29 100.0 36 ............................. TCGAACATGTGCACATCTGTATCAACATAAATTGTC 3015041 29 100.0 36 ............................. TCGAACATGTGCACATCAGTATCAACATACATTGTC 3015106 29 100.0 34 ............................. GAAGCTATTGTCAGTAACTATGACGAGTTAACTT 3015169 29 100.0 36 ............................. TTATTTCATATAACTCTTTCAACCTCTCATCTGACA 3015234 29 100.0 35 ............................. GACTATAAGGTATTCCTTCACAGCGTTCAATCAAA 3015298 29 100.0 36 ............................. TAGCAGTTCTTTTTATTTATTTATATAATTGTGAGC 3015363 29 100.0 35 ............................. GTTGATTCAATATAACTACCAAGCGTATAATAAAC 3015427 29 100.0 35 ............................. TTGCCTCCCTCAAGCAATCCGAAATAGCAGCATTA 3015491 29 100.0 37 ............................. AAGAATGAGCATCTGGACAAGGTAAAACAGTGGGAAC 3015557 29 100.0 35 ............................. TTGAGCAGGATGCTGATATCGTATCGTTCTTGTAT 3015621 29 100.0 35 ............................. CGTCAAAAAGAGCCTTTCCGTACTCCTCCACCTTT 3015685 29 100.0 37 ............................. TTCACACCAACCAGCACGAATGGCATTTGCCGTCATC 3015751 29 100.0 37 ............................. ACAGATAAAGCATCGATGTTACCAGCTGCTACATCTC 3015817 29 100.0 36 ............................. ATTTGCGGGTTTTTCTTTATGTAAAAAATAATTGAA 3015882 29 100.0 36 ............................. TTCATGAATCAAGAAATGAGCAAAGACCGCATCACG 3015947 29 100.0 37 ............................. GGAATAGTAAACAACAACGCCCCCACAACACGTTCTC 3016013 29 100.0 36 ............................. ATTTGCGGGTTTTTCTTTAGGTAAAAGATAATTGAA 3016078 29 100.0 36 ............................. TTCATGAATCAAGAAATGAGCAAAGACCGCATCACG 3016143 29 100.0 37 ............................. GGAATAGTAAACAACAACGCCCCCACAACACGTTCTC 3016209 29 100.0 36 ............................. TCAGGTGGATACTCTAGCTCAGTCATGCTGTTTAAT 3016274 29 100.0 36 ............................. TAATGAGCGTATGATTAGACTCGAAGGGCGTGTGGA 3016339 29 100.0 37 ............................. CAACGCATTGGACGCTCTTGACGAAGAAGCGATGAAA 3016405 29 100.0 36 ............................. ACTTTGTTGACTTTGGTAAAAGGCAGGTTGTTGTCG 3016470 29 100.0 34 ............................. CTTGTAACAGGTTTAGCCGCAATGAGCGCAACTG 3016533 29 100.0 36 ............................. TCTCGACCGCTTCTAAACGTTGATTCAGCGGTTCTA 3016598 29 100.0 37 ............................. GACTCTTTCAAGTGAGATAATTGCGGCCGTGACATAT 3016664 29 100.0 36 ............................. CAAGAATGGCGCAATCAAATATATGGGTACCAACCA 3016729 29 100.0 36 ............................. TGCACATTCGTACTAAGATCTCATCAAGTCGTTTAC 3016794 29 100.0 37 ............................. TTTCCAATCTTTCAACTGCTTCTTCAAACTTGGATTC 3016860 29 100.0 37 ............................. TTAAATCTTTAGTTTCATCCGCGAGTGTGCTAAAAGA 3016926 29 100.0 37 ............................. ATGATTTCTTCAATTTCAACGGATTCACAGCAATTTT 3016992 29 100.0 37 ............................. AGTCATGATGAGTGCAGAATATGCGGTGCCAACTTAA 3017058 29 96.6 36 ..................A.......... GAATGCTAGGTGATTACATAGAGCAAGATCACTGGC 3017123 29 100.0 35 ............................. CGGCTTGTCCCAGTAACTCAAAATCGTGGATATAC 3017187 29 100.0 34 ............................. CACTAGCATCTTCAGCTAGTAATAATTGATTTTC 3017250 29 100.0 37 ............................. ACTGTTGTGCTTCCCGAAAGTGCGGACTTGCAGCTGC 3017316 29 96.6 35 ...............T............. ATGTTTAAGTTTATTCCTAGTGGTAATGGATTCGG 3017380 29 100.0 35 ............................. GATACAATTTCAAAGGCAATGATGACAGTGTATTA 3017444 29 96.6 38 .................C........... TCAGCTTCTTGTTTTTCATCAATGTAACGAGTGCAAAC 3017511 29 96.6 35 ...............G............. AGAATTGCACCGACTCCGCTACAACTTCGGTTACA 3017575 29 93.1 32 ...............T.C........... TTATATCCCACTACGTTCAAATAGAACAATTA 3017636 29 86.2 0 A....C.T.......C............. | ========== ====== ====== ====== ============================= ====================================== ================== 53 29 99.4 36 GTTTTATCTCAACTAAGTGGAATGTAAAT # Left flank : ACTCCTTAATTATCTATTGTTATTTTTTATAAAAAATGTAATATTTTTTAATTTATATAGTTATTTTCACACAAGACCTACTGGATTGTCAAATATTTATAGCTTCTAAAAGACTAAAATTTGATATCAAAACATTTTAATAAATTGTAGTCAATGTTGTTAAATAAGTGCCTTTACACCTATTATTATAAACGATGACCTTCATAAAAATTCGGATGGGCTTTATGTTATAATTCTCACTTCACATTGATTAGAAAGATGGTTTACGCTAACTTTTGGAGTAGATATAGAAGATTGAAAAATAAGCTTTTTCATATTTGCAGTAAAGCTCTATTTTACCTAAAAGCTGTTGAAGCCTTGTCCCCATTAACTTTCAAGTCTATTTTTCCAAATTTTACGATTCACGACTGCGGCTTTACGGCAATTTATGTTAAAATAGGCTTAGCGAATCACTTACAAACCCTTGATACAAGTACTTTTTTATAATGACCAAATGAGGG # Right flank : TTTTTATAATTTATCACTCGTTTTACTTTCAACAACAAAAAACCATATTTCATAGATGATTACTCAACATCTATGAAATATGGTACAGGATTAAATAACTTTAATCTCCTAGTTACTTACTCCTTATTCTCCATCCGCTTCCCTTCCCTAAATACTTTCGCACTTCTCACATACTCTACATCTTTCACACTAAGGCGAGCGTTGATCACGCGGGCGATGGCAAAGAAGTAGTCAGATAAGCGGTTTAAATATTGCAGTGTAACTGGATGGATGTCTGGTTCAACTTTCATTAAGCTAACGACTTGGCGTTCAGCACGACGTACGACGGTTCTAGCGATGTGAATGATGCTGGCTGCTTTGGAGCCGCCTGGTAAAATGAAGCGCTCTAAGGCTGGTGCTTCTTGAATGTATTGGTCGATTTTCTTTTCTAGTTCTTCGACTGCTTCTGCTTGTAGCTTCCATCCTCTTGCTCCTGTTACTGTGGCTAAGTCGCCGCCGCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTCAACTAAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //