Array 1 8724-10191 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVVD01000037.1 Enterobacter hormaechei subsp. steigerwaltii strain GN06275 GCID_ENTE_00298_NODE_4.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 8724 28 100.0 32 ............................ GTGTTAACTCGCGATGGTGGTGGCCATGTTGG 8784 28 100.0 32 ............................ TCCATCTCGATGTAGACAAGGGTTTTCCCGTC 8844 28 100.0 32 ............................ AGAGATTGTTGACGACATCAGGATGATGGGGT 8904 28 100.0 32 ............................ AATCAGCAGCTGATCCATACAAGGGTTCTTTT 8964 28 100.0 32 ............................ CGTAGACACAGCGGCAACAAAGCGATCGTAAA 9024 28 100.0 32 ............................ TGACGACGGCACGACTGTCGCGATGTTTTTAT 9084 28 100.0 32 ............................ TCGCACGGACGGTGATCCGTTGGGCATGAATC 9144 28 100.0 32 ............................ GTCCAGGTCTGCGGTGAGCGCTTTTAGTTGCT 9204 28 100.0 32 ............................ ATTACCATCCGGGCCTTTACCGTTTACTGTTT 9264 28 100.0 32 ............................ GTGCGTCTCGGTCGATGCAAAGTACGTCCCGG 9324 28 100.0 32 ............................ ACAGAGTCAGAGACCAGGCCGCCACCGAACCC 9384 28 100.0 32 ............................ AGCAGGTAGACGACGCGCGCCACAGACTGTGT 9444 28 100.0 32 ............................ CTTCCCGCGTCGGTCACGCAATCGGACATGAC 9504 28 100.0 32 ............................ GCGATATCGACGTAGCTGAAAAAGAGACAAAA 9564 28 100.0 32 ............................ AGTTCAAGGCTGGCATCTTTGAGCAGTATTAC 9624 28 100.0 32 ............................ GTGGAGTTCGCCCGTTTCTGGGTCGAAGACCA 9684 28 100.0 32 ............................ GCATTTTGAGGCCCATCGTTTTGATGGTCTTC 9744 28 100.0 32 ............................ ATCGCATCCTTGACGGGCTTCGCCAGCGCAAG 9804 28 100.0 32 ............................ TTTGAAGCCGGTATAAGTATCTGCACCAAATG 9864 28 100.0 32 ............................ CATAACGACACCTTTTAAAATCGTTAATTAAC 9924 28 100.0 32 ............................ TGATTGAGCATTAACAGGGGCAGACTGTAGAC 9984 28 100.0 32 ............................ CTGACGGGTCCCGATTTTGCGCTGGGCGTGAA 10044 28 100.0 32 ............................ CTGCTCTTCGCGAAGACCAGTTAAAACATAAC 10104 28 100.0 32 ............................ GTAGACCCCGCGATGAATATTCCATACTTAGA 10164 28 78.6 0 ...................T.A..CCCC | ========== ====== ====== ====== ============================ ================================ ================== 25 28 99.1 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTTGGTGCTTATCTGGACGTAGTCAAAACTGAACTCGCAGAATCAATGTGTGATTTCCGGGTAGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGCGCTGCTGGTGTCGTATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACATATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAAGTTTAGTGTCGTGCGTCGGGGGAGGGGTTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCCAAATATTCACTCCAGCTATTTTAAAACCCATAATCATCACCACAATCCTCTTTGTATTTTAAATAAAATCAATACTCATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGATATTCCGACAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTAATCTCCGCTAACATACCTCGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTAGAGAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTGACGCAAATGGCGATGCGGGAGTTCGCGCGAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 19669-20415 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVVD01000037.1 Enterobacter hormaechei subsp. steigerwaltii strain GN06275 GCID_ENTE_00298_NODE_4.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 19669 28 100.0 32 ............................ TCCTCCAGTGCCGCGCCTTCGATCGCTTCACC 19729 28 100.0 32 ............................ AGCACGAATACAAAAGCAGTAGTCATCAACTT 19789 28 100.0 32 ............................ CTCAGCTGTAATGCGCTCCACGCTGTTGATAC 19849 28 100.0 32 ............................ TCCATCGCTACGGCCTGGTTGATTACCATTTT 19909 28 100.0 32 ............................ GGTGAGCGCAGCAGCATGACGGCGCTGAAGAA 19969 28 100.0 32 ............................ TGACTGCCCAGGGTGATTTTGTACCGCCGAAA 20029 28 100.0 32 ............................ AGTCGAATTGTTGCCAGTCGGCTTTATCCATA 20089 28 100.0 32 ............................ TGGAGCCTGAAAGGTGATGCGCCAGCTCCGGC 20149 28 100.0 32 ............................ GACAACATCAACAATCGTCATTGCTGCCATCA 20209 28 100.0 32 ............................ GATGGGGAGCGGCAAAACACAGGCGCTGCTTC 20269 28 100.0 32 ............................ GCTACGGCTGCGGGTATGAATCCGGTTTTATC 20329 28 100.0 32 ............................ TCATCGAGTGTAAGGCTGTGTGATTTTATTGT 20389 27 71.4 0 ......CA.......AC..A.AC.-... | ========== ====== ====== ====== ============================ ================================ ================== 13 28 97.8 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCTATCAGCCGCATGCCTCTGCTTGCAGGCAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTGAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGACCAAAATGTAATCTATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAAGGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : ACCCGAAACAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGTATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACAGAAAGCGCATTCGTAAAGGGGAGACGACA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //