Array 1 3450080-3452046 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOOG010000001.1 Bacteroides sp. NSJ-21 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 3450080 47 95.7 30 ........C.......................C.............. GATAGGAATATACGTGAAATTGAAACAATA 3450157 47 100.0 30 ............................................... CGACCAAAATCAAGGGAACGCACGTTCATC 3450234 47 100.0 29 ............................................... TTCATAAAGTTTTTTTGTTGGCAAGGTAC 3450310 47 100.0 30 ............................................... TGGATTCGATGTACACGCCTATCGACGACG 3450387 47 100.0 30 ............................................... GAAATAATTTCGTTATCGAATTATAACTTT 3450464 47 100.0 30 ............................................... AGTTACGCTGCTGTATAGCCATACGTTCGT 3450541 47 100.0 30 ............................................... CTGTACATCGGAAAAGGACTCTGCAGACTA 3450618 47 100.0 30 ............................................... CTTTAGTGAACAAATTATGCCCTTATTATC 3450695 47 100.0 30 ............................................... ACCCCCATCCTTCGATGAATTCCTTCATGA 3450772 47 100.0 30 ............................................... GAAACCAACAAGGTATGATAGCAATCAGCG 3450849 47 100.0 30 ............................................... ATAAGCTTGTGGTGGCTGCTGGAAGACCTA 3450926 47 100.0 29 ............................................... TTTTCAAAAGTAAATGTAACGTTCATGCT 3451002 47 100.0 29 ............................................... GAGGCGATGAACGACGTACAGATAGAGTA 3451078 47 100.0 29 ............................................... TCCTTAGAGAGCTCCGCAATGCGATATTT 3451154 47 100.0 30 ............................................... AATTGCCCGTACCCGACGAGATACGTACCA 3451231 47 100.0 30 ............................................... CCGCCAGCCGTGCGGAATTGATGCCCGTGT 3451308 47 100.0 30 ............................................... GACGTGTCAAGTCGAGTGATAGCAAAAAGC 3451385 47 100.0 30 ............................................... AAGCTCTCTTAGTTTCTCTCCAGGTGACGA 3451462 47 100.0 30 ............................................... TTTGTTCGATGTCCTTGTAGAGGAAATACT 3451539 47 100.0 30 ............................................... CTATTCGGCGTTTGAATCCCATTCACTTTT 3451616 47 100.0 30 ............................................... TTTTTAAAAAGAAAAGAGGTCACCGAGACA 3451693 47 100.0 29 ............................................... TTTAAAAACAGAAAATTATGGAAAAATAT 3451769 47 100.0 30 ............................................... AGCTCGTCGAGATTACGTTTTGTCAGTAGA 3451846 47 100.0 30 ............................................... CTATGTCTTCCTTTTTCATAATCGTACTGT 3451923 47 100.0 30 ............................................... TGGACATACTTCGGCAAACATAATGGGGTA 3452000 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 26 47 99.8 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TTCTGTATGGCAGGGCCTGCTTTCCATATTTCATCCAGAAACACGACGTCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCGTACTTATCGGATTCTTTCAGCCGGCTGATGCTGACGGGACCGAATATCTCGTCGGGTGTAGAGAATCGGGACATCAAGTATTCGAAGGCACGGGCATCTGTAAAAGCAGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGCCCCAGGAGCAGGATGCTCTCACCTGCCAGGGCTGCCAGCAGGGAGAGGTTTATTTCGGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGGCGGATGCGTTGGATCATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACCAAATAGTAGCGAAATCAGAGAGATTCTTATTAAGATTCACTATTTTTGGAAAACAAATACACACACAGACACGCACACACAC # Right flank : CTGATTACAAGTAACAATCTAATATTCAAACGATTACACATAGTATTAGAATATAAAAAAAGAATGCTGCTTCTGAAAAAATCCCGCCATTGCGCGGGATTTTTTTAGAATAATTCTAATTGTTGTCCAGGCGTATTCACATCCACAGTCTTTTTCCCATAAAAAAGTGCTATATTTCCAAATTGCTTGTCCGTAATGCACATAATTCCGACACTTCCATAGTCCGGTAAGAAAGATTTAACTCTTTTTATATGTACCTCCGCATTCTCACAACTCGCACAATGACGGACATATATAGAGAACTGGAACATCGTAAATCCATCCTTTTGCAGATTTTTTCTAAATTCCGCATACGCCTTTTTATCCTTCTTGGTTTCGGTAGGCAAATCAAACAACACTAATACCCACATAATGCGATATTCACTAAACCGGTCCATCACATCTCTGGATAGGATATTTTACGCAACTCACCACTGAAACATTTATACAGAGAAGCCGTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //