Array 1 519-63 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAHP01000126.1 Arsukibacterium sp. MJ3 EFN4V4V6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 518 37 100.0 33 ..................................... GACTCGGCGATGCCGTTATTCAGGTCAACCCAG 448 37 100.0 33 ..................................... GATAACCCCACGCTATGGCCCCACTGGTTTGCC 378 37 100.0 32 ..................................... CTATCGGTAAGGCTTAGGTTAAGGAAAGCCCC 309 37 100.0 34 ..................................... CAGCCCACTTTGACTGGTGTAAGGAGTCTTGAGG 238 37 100.0 33 ..................................... ACACGACCATTACTATCGGTCATGACCAGATTC 168 37 100.0 32 ..................................... ACACAACGTGTCCAGCTGGGGACCGGATACAG 99 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================== ================== 7 37 100.0 33 GTTCAAACGTTGCCCCGACACTAAAGGGGATTAAGAC # Left flank : CGTTGCCCCGACACTAAAGGGGATTAAGACAGGTTGGATAACCCCACACTCTCACCCCACT # Right flank : CAGGTTGGATAACCCCACACTCTCACCCCACTGGTTCAAACGTTGCCCCGACACTAAAGGGGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAACGTTGCCCCGACACTAAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 63-312 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAHP01000105.1 Arsukibacterium sp. MJ3 EFN4V4TH, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 63 37 100.0 33 ..................................... CAACTTTCTTTAAGCCCATGACGGACTCCTTAA 133 37 100.0 33 ..................................... AGCTCTTGCACGCTATGCAAGTCGTGCGTCTCT 203 37 100.0 33 ..................................... CGTACTCGACGTGGTTCTGAGCGTTAAGGATAG 273 37 89.2 0 ........................C....C.....CT | C,G,C [300,305,307] ========== ====== ====== ====== ===================================== ================================= ================== 4 37 97.3 33 GTTCAAACGTTGCCCCGACACTAAAGGGGATTAAGAC # Left flank : GTTGCCCCGACACTAAAGGGGATTAAGACATCTGACCAAAGTTTACTGCACTCCCACTTGGGG # Right flank : AGTTGTCGCCTGAGTTATGTTTAATTAAGCTGCTTTTAGCTGCTCTTCTTTTGCCACTTTTACGTGACCAATCTCTTCGTTTTTATCCGGATTCAGTTGAACAATAGCAACCCGCTCCCAGTTTCGTGTATCACCGCTCCAACGTCTTGGATTGGCCGTTTTAGCACGTGCATACACTTCTTCCCGTTGCTTCAGAACGGCTGAGTCTTGACCAGCATGGCGCTGTGACGGCGTGACAAAGCCTATCGCACTGTGTTGATGGTCATTGTTGTACCACTGCACAAATCGCTGCACCCATTGACGGGCCTCTGCCAGGTTAGCAAACGCCTTTTTCGGATAGTCAGGTCGGTATTTCAAGGT # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAACGTTGCCCCGACACTAAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.10,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 528-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAHP01000149.1 Arsukibacterium sp. MJ3 EFN4V4VZ, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 527 37 100.0 33 ..................................... CGAGTTTTCGCAACTCATCCATGGTGACTGAGT 457 37 100.0 33 ..................................... TGCCGGCCGTATTCAGTAGTAACGTCCCACATA 387 37 100.0 32 ..................................... GAGCGTTGATGATGGTTGACAGCGCTGATACT 318 37 100.0 34 ..................................... ATTGCTCGCGCTCCCAGCGTTCTGTGATGTGTAC 247 37 100.0 34 ..................................... ATTTCCTAAAGTATTAACGTACAAAGGAGAAACG 176 37 100.0 33 ..................................... CAATATCGGCGGCTGCTTTGTCGGCGTCAGCAG 106 37 100.0 32 ..................................... ACTACTAACACTGACGTGGAGACCTCTGCGGC 37 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================== ================== 8 37 100.0 33 GTTCAAACGTTGCCCCGACACTAAAGGGGATTAAGAC # Left flank : | # Right flank : C # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAACGTTGCCCCGACACTAAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 1361-63 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAHP01000019.1 Arsukibacterium sp. MJ3 EFN4V4QM, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 1360 37 100.0 31 ..................................... TTTTAGCAAAGCGCGCCCGGCGCGGGTTGTG 1292 37 100.0 34 ..................................... TTTTTCAAGGCTTGCCATGCCTCGCTCGGTGCGG 1221 37 100.0 32 ..................................... GGGTATTCGACGTTTCTTACATATCTCATTTC 1152 37 100.0 32 ..................................... TCGGAACAGGATTGTTTAAACCATGTTCCACG 1083 37 100.0 32 ..................................... TTTCATAAATTCCCATACTCACAAGCTTTCCG 1014 37 100.0 33 ..................................... TGGAAGCAATGGCTGCTAAATACAAAGACACTA 944 37 100.0 34 ..................................... CCCACAAGGCCGAAGTCCACAGCACTACCCGACG 873 37 100.0 34 ..................................... CTTGCGCGGAGTGCGCGCAGGAGCCGTAGGAACC 802 37 100.0 33 ..................................... GTATAGTTCGCCCCCTAGCCAGCCCTGATTAAA 732 37 100.0 32 ..................................... CTATATGTGTCTATCAGCTCTTGCAGTGCTAA 663 37 97.3 33 .........T........................... ATTTGCTACCGCGCATGGATGAAGCAGGTTGGC 593 37 97.3 33 .........T........................... TAGGCTACTTGCGCGGAGTACGAACCCGCGCAG 523 37 97.3 32 .........T........................... CTAACGGCAAGCCTTTCGGCAAGCGGAACACC 454 37 97.3 35 .........T........................... TTGGCTTCCTGTGCTGCTGTCCAGTTCTTTGCTAC 382 37 97.3 34 .........T........................... GTGGAGATATAAGGTTACTTCGCTGCAGCTTTGC 311 37 97.3 33 .........T........................... TCTTGTAATCAGTTGCTTGCGTTGGCGCTACAT 241 37 97.3 34 .........T........................... ACATGACCAGCTGGCGCATTGGCCATTGCCTTGT 170 37 97.3 34 .........T........................... TTTAAGCTGATTGATTATTTCTTGATTACTTTTT 99 37 97.3 0 .........T........................... | ========== ====== ====== ====== ===================================== =================================== ================== 19 37 98.7 33 GTTCAAACGCTGCCCCGACACTAAAGGGGATTAAGAC # Left flank : GTGATACCGTCGGCAGAGCTAGCTAAGGTAATAAATATAACGCCAACACTGCCAGCCATACAGTTAGTGTCGGTAACCGCGCAGTTTTCTGATTGGCAAAAGTACAGTGTGAAAGATCAGCGGCAGGTTAGTATTGGCGGGTTAGCCGGTCACTGGGGTTATGCTGGTATAACGGCCACGGTTTATAGTTATTTATTGTTAGGTGAATATATTGGTATTGGTAATAAAACCAGCTTTGGCTTTGGCTGCTATCAAAGCAGTTTAGGCTTTAGTTCCAAAACGTTATCGATACAATAGTTATTGGCCAATGGCCTTTGCTTAGTAACATATTTATTAGGCAATATGTTCGGGGTAGTTCTATCCTGCTTAAACGTAGGGTATATTAACTTAGCTCTTTAACAACTTAATTGTACAAAAATTAGCCAATTTACTGGTTAAAAAGTAATCAATAAAAAGCGTTTGCAAGTATTTGTTTTTTATATAGAAAAAAACGTGCTAGA # Right flank : CATCTGACCAAAGTTTACTGCACTCCCACTTGGGGTTCAAACGTTGCCCCGACACTAAAGGGG # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAACGCTGCCCCGACACTAAAGGGGATTAAGAC # Alternate repeat : GTTCAAACGTTGCCCCGACACTAAAGGGGATTAAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 1 1776-63 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAHP01000030.1 Arsukibacterium sp. MJ3 EFN4V4R0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 1775 37 100.0 34 ..................................... CTGCAGTGCCGGCTAAGAAAGAACCAGCTATTAC 1704 37 100.0 33 ..................................... TTGCGGTATCGCCGCCATCACCATCGATTGAAG 1634 37 100.0 33 ..................................... TAGGCAATAATGCCCGGCCTTTCGACCGAGCAT 1564 37 100.0 34 ..................................... GTTAGACACACGGCTAGTACACGTAATGAGCTAC 1493 37 100.0 32 ..................................... CTTCTCCCAGCGTTCGGTAATAATTACCAAGA 1424 37 100.0 32 ..................................... ACGCGCATTGATCCATATTGCGAAGGCTGGCA 1355 37 100.0 33 ..................................... GGCAGTATCAGGGCCAGCTTAAACATCATCCTT 1285 37 100.0 33 ..................................... AAGCTGCGCCTGTTCTACGGGTTAATTGCGGTA 1215 37 100.0 32 ..................................... ACCACAACAAGTATGCCTGTGGATATTTCTGC 1146 37 100.0 35 ..................................... CCAATTTTTACTGCTACGCCAGACTCATTTACTAA 1074 37 100.0 34 ..................................... TTCGGCAAACGGAACACCCGACCATTACTGTCAG 1003 37 100.0 33 ..................................... CGGCCAGATCTTCTGCCGTAGCCCAGTCCGTAG 933 37 100.0 32 ..................................... AGAGACCTTAACCCCAGCGCCCCAGCGTATGC 864 37 100.0 33 ..................................... CAGTCAAATGGAACACAAAGCCCACAGGAGCCG 794 37 100.0 32 ..................................... CTCCGTTCCAACCATCTGGACGGTTCCAGTCA 725 37 100.0 33 ..................................... TTGCTTATCGAACTCGTCGCGCAGCTTTTTGAT 655 37 100.0 33 ..................................... GCATTGATATTCATGTTATTTCCTTCTTAGGAG 585 37 100.0 32 ..................................... GGCCTTCGACGTGGATAAACCTACCGTTTGAC 516 37 100.0 32 ..................................... ATCGCTGGCTTGCCTACAGCCTTTGGTATCAG 447 37 100.0 32 ..................................... AGTAGGACGAGGATCATTGCTCCGAACATTGC 378 37 100.0 32 ..................................... ACGACAAGTATGCCTGTGGAGACTTCTGCAGC 309 37 100.0 32 ..................................... TTAAAGCGGGATAGCATTAAGGTGGCATCGTC 240 37 100.0 33 ..................................... GGTTATGTCAGGATTGGCTGCAGCCACTGCACT 170 37 100.0 34 ..................................... GAGGATCAATCCGGTCTTAAAGCAATAGGTGATT 99 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =================================== ================== 25 37 100.0 33 GTTCAAACGTTGCCCCGACACTAAAGGGGATTAAGAC # Left flank : TTATCCTAGCCTGGAGCTGTTGACATGACAAATTGCGAACACTGGTACGTTATTAGTTACGATATTCGTGAGCGTAAAAGACTGGCACGGTTACATCGTTATTTAAAGCGCTATAGCTTTATGTTGCAAGAGTCGGTTTACCTATTTGTTGGTAATAAAACGGCCTGGCAAACGTTAAAAACCGAGCTGGAAAAGCGGATAAAAAAGCATGAAGACGATGTAAGAGTGTACAAGTTAGATAAAGAATGTTGTTTTAACTTTTTTGGCAGCAGCCCCTGGCCCCAAGGCCTGTATTTTGGTGGTTACCCACGCTTTACTTTAACGCCTTTATTGGCGGTGGCGGTATAAATAATTAATTGAATTTATACAACACAGTAGTATAGTAAGGGTGCTCTTTAACAATTTAATTGTACAAAAATTAGCCAATTCATTGGTTAAAAAGTAATCAATAAAAAGCGTTTGCAAGTATTTGTTTTTTATATAGAAAAAAACGTGCTAGA # Right flank : CAGGTTGGATAACCCCACACTCTCACCCCACTGGTTCAAACGTTGCCCCGACACTAAAGGGGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAACGTTGCCCCGACACTAAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 63-868 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAHP01000077.1 Arsukibacterium sp. MJ3 EFN4V4SK, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 63 37 97.3 33 .........T........................... GTGGCGATCTCCGCCGACTCAGCGACGTTGCTG 133 37 100.0 33 ..................................... TGTCTCTGCCTGTCTGGCAGCTTCAGCATCCAG 203 37 100.0 31 ..................................... ATTAACTGGCTCTAAGCGTGGAGCGGGTTTG 271 37 100.0 33 ..................................... TAATTGTGTCGAATGTGCCACGTAATTCTACGT 341 37 100.0 32 ..................................... ACGGGATTGCCCCACGCTGCTCATGCTATGTG 410 37 100.0 33 ..................................... CTACGCGAAGACTGCTGCCACAGTCTCCGACTC 480 37 100.0 33 ..................................... TTTTGCTCCTTCTCCCATTTCTTAGCTACCACG 550 37 97.3 35 ..................A.................. CCACTTGGCGCGCTGGCCATTGCCTTAAACAAGGC 622 37 100.0 33 ..................................... GTAAGGAGCGCTTTTTGCTCCTTCTCCCAGCGT 692 37 100.0 33 ..................................... TATTCTGAGGTAGCCACCGACGTATCGGTGTCC 762 37 97.3 33 .........T........................... CGGCTTAAAACACCCTCGGGGATTTGGTTTAAA 832 37 97.3 0 .........T........................... | ========== ====== ====== ====== ===================================== =================================== ================== 12 37 99.1 33 GTTCAAACGCTGCCCCGACACTAAAGGGGATTAAGAC # Left flank : GTTGCCCCGACACTAAAGGGGATTAAGACATCTGACCAAAGTTTACTGCACTCCCACTTGGGG # Right flank : ATCTGACCAAAGTTTACTGCACTCCCACTTGGGGTTCAAACGTTGCCCCGACACTAAAGGGG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAACGCTGCCCCGACACTAAAGGGGATTAAGAC # Alternate repeat : GTTCAAACGTTGCCCCGACACTAAAGGGGATTAAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.10,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA //