Array 1 197543-198241 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABWUT010000002.1 Klebsiella pneumoniae strain ZKP118 isolate ZKP118, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 197543 28 100.0 33 ............................ CAAAAGGCGCCTTGAACATTAGCAGTTCAGCCG 197604 28 100.0 33 ............................ CGGTACTGGTGGAGGTATCAATGCGCTGCTTGC 197665 28 100.0 33 ............................ TTACGATGTTGAAAAAGCGATGTCGGCTGTAGG 197726 28 100.0 33 ............................ CCAACGGGTATAGTTTTAACTCCGCTTTTCTCA 197787 28 100.0 33 ............................ TATCCGGCGGCCATGATCCCCGGCATGGCGTCC 197848 28 100.0 33 ............................ TCCACATTTTCAAAATGCGGTAAACTTCTTTCG 197909 28 100.0 33 ............................ CGTGGCAAGCTCCGTCCCGCCTCCGTGCTGGAT 197970 28 100.0 33 ............................ TTCCATCATCTGCGGCGGGATAGCGCTGCGGGT 198031 28 96.4 33 ............C............... TTCCATCATCTGCGGCGGGATAGCGCTGCGGGT 198092 28 96.4 33 ............C............... TCTGCAGCTGGCCGTCGAGCTGACGGATGCCGG 198153 28 100.0 33 ............................ TTCATCACGTGTGAGCGGATTTGGCTCTATCCT 198214 28 92.9 0 ...................A.......T | ========== ====== ====== ====== ============================ ================================= ================== 12 28 98.8 33 GTCTTCCCCACATGCGTGGGGGTGTTTC # Left flank : TTAGCGTTGGCGAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGACTTGACGGCGCCGCGCAGGATAATAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTACGCGAAGCCACGGAAGGCAAGCGTCAAGACGTCGCGCTATATTCTGGGTATGACAAAAGCGTTTTGCGCCTGGCTGCGGGGCGGGCAGGCCAGTAGGGTAGACCGGCCCAGGTCAGCAGCAAGTCGACGGTGGTGATATGGGGACATACTTTTTCGTTTGATGAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAACTATCGTAAATCTGGTATTTTAATACGCCGCTAGACACAATATGCTGGT # Right flank : TCGCCTTTCAAGTGTCGACAAGTAACGTCTGTGCGCATTTCTCAGATGAAAGGGGATTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATGTTTTTTGTATGATTTTACTTATAAATATTCGTGAACTATGTTTGTCCTATACTTTCTTTAGGGGCATCTAAATCATTCGAGTTTATTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAGCTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGATGTTTTTGATTTTATAAAAAGTTATTTATAAGTTTCCCGGTTTTTAGTATTAATAAAGGGCACATGTTTTTTAAGGAAAAATTCCATGAGGCGCTTGATCAGGGTTTCGCTACAAAATCAACATGCCATCGCGGCGATAAGTTTTGAAAACTGTCCAGCGAAAACCCGGATG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACATGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 206996-208121 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABWUT010000002.1 Klebsiella pneumoniae strain ZKP118 isolate ZKP118, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 206996 28 100.0 33 ............................ TATAAATATTTCTTTCGCACCAGAGGATATTCC 207057 28 100.0 33 ............................ CCACATCAGGCCAGTACACCCGACGTTGTACGC 207118 28 100.0 33 ............................ TTTCTTTATCTGAATCGTCATGGTTATAACGGA 207179 28 100.0 33 ............................ TATGGAAACGGCGGAAAAAGCCGGGCTGGCCAG 207240 28 100.0 33 ............................ CGGACGCGTCTATCCCGGAGCCAATATCGCCGC 207301 28 100.0 33 ............................ CCTGTTCATACAGCTCATTCGCACGGATGAGAT 207362 28 100.0 33 ............................ TATTGGGCATCAAGGATCCTCCACGCGATTGCC 207423 28 100.0 33 ............................ TGATTCGGATAAGTGTCTTAAGGTCGTTGCTGA 207484 28 100.0 33 ............................ CAAAAAATAAACGTCGTTCCTCTTCTATACCTT 207545 28 100.0 33 ............................ CGTGATAGTTGATGCTGGTTGGTCAGCTGTCAG 207606 28 100.0 33 ............................ TGGGTGGCAGGCGAAAACCTGCAGGAGATCGGC 207667 28 100.0 33 ............................ CGGGATGGCCTACCCCAACCACCGAATCTGCGA 207728 28 100.0 33 ............................ TCGATATCGCTTTGAGTACACCGTAGAGGATCA 207789 28 100.0 33 ............................ CTACGACTATTCGATCTCTTACGCGCAGCTTGA 207850 28 100.0 34 ............................ CTCGACGATTCGCCGCTGGCTGACGGGTAAATCG 207912 28 100.0 33 ............................ TGGCGATATCCACGCTGCGGCCAATGGCCAGCT 207973 28 100.0 33 ............................ GCGTGGACTACCAGGGTATCTAATCCTGTTTGC 208034 28 96.4 33 ........T................... CCCCGCTTTTGAGCACGCGCTGGCATTCGTTCT 208095 27 85.7 0 ......A...T.T....-.......... | ========== ====== ====== ====== ============================ ================================== ================== 19 28 99.1 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGAGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTCCGTGGACGAATGAAGCTGTGGTTTGTCGAACCACGGCCAAATGTTTTTGTCTCAGGCGTCAAAGATTCGGTCGCACAAACCGTTGTTGATTACCTGTTGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTTGCTACAAGGGTGAGGTCAGAAACCCGATTATTGATCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT # Right flank : CTTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAGCAATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGTAGAGGTAGGAATATTTTATTGCGATAGAGAAGGGAACTGTTTAAAGCAATAACGGCGAATGATTCTTATAAAATGAAGGATAGGGAATTCATATGTTTCGACTTTACCAGTCACATGATTTAATACGCCAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGCGTGTATACATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCCTACCGAAGGAAATATACAACTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTATGATGAGGTAGAGCACAGGCTACAAATTGGCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //