Array 1 71323-70260 **** Predicted by CRISPRDetect 2.4 *** >NZ_QXGH01000021.1 Nocardioides immobilis strain CCTCC AB 2017083 contig_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 71322 28 100.0 33 ............................ CGTGCGAGCGGCGAGTCCGACGGGGTTGAGCTG 71261 28 100.0 33 ............................ GTTGACGGTGTCGTTCTTCGCGCCGGTGAAGTT 71200 28 100.0 33 ............................ CGAGCGCGCCTGGGGCTACGGGTCCACATCCGG 71139 28 100.0 33 ............................ GATCGAGTCCGCAGCCACCGCCACGCCGTCGAC 71078 28 100.0 33 ............................ GTTGAAGCCCCGGATGATCGAGTCGCGGGCAGC 71017 28 100.0 33 ............................ GAAGATGCTCACCGCGACGATCGCCGTGGCTGT 70956 28 100.0 33 ............................ GTGCACGGTCGAGAGTCCGAACGTGCTCCGAGA 70895 28 100.0 33 ............................ GCGGTCCACGTCGAGGCGCACGTCGTCGACGTA 70834 28 100.0 33 ............................ CTGGTAGCCGGTGACGTCCATCCACGCGCCGGG 70773 28 100.0 33 ............................ CTGGAACCGGGTCCGGGTGACACCGGGAACAAG 70712 28 100.0 33 ............................ GATGGTGGCGTCGGTGTCGTCGGGAGTGAGATC 70651 28 96.4 33 ...T........................ GGCCACCGACCGCATGGCGGCCGCCCTCGGCGC 70590 28 96.4 33 ...............A............ GAACAGCCGCGTAGCCCCTGCCTCGGCGATGCC 70529 28 100.0 33 ............................ GGAGTCGCCGAGCAACTCGCCCTCGGTGCTGGT 70468 28 100.0 33 ............................ GGATTGGCGGCCGGTGAAGTGGACGTGGTTACC 70407 28 100.0 33 ............................ GGATTCGCGCGGCGGACAGGCCTGACCGTGAAG 70346 28 100.0 33 ............................ CAGGGTGCCAACGGTGTTGCGGGCCTCGATGAA 70285 26 85.7 0 ...........-..G.....A.-..... | ========== ====== ====== ====== ============================ ================================= ================== 18 28 98.8 33 GTGCTCCCCGCTCGCGCGGGGATGAGCC # Left flank : GCTTCCTCCCGAGGAGGTCGAGGACCAGGACTGGAACGTCGTGTCTTTGTGGGACGGCGGGAACCGTACTGTGGCTGGCGGCACGTTATATGAGGAGGACATCCCGTGGTAGTCCTAGTGCTCACGGCTTGTCCGGCCGGCCTACGCGGGCATCTGACCCGGTGGTTGATGGAGATCAGCCCAGGCGTCTTCGTGGGGCAGGTGACCGCTCGCGTGCGTGAGCTGATGTGGCTCCGCGTGCTTGAACTGTGCAAGGAGGGAAACGCCATCATGGTTCATTCGTCCGGCAACGAGCAGGGGCTGGAGTATCGCTGCCACCGGCACGATTGGCAGCCGGAGGAATTCGACGGCATCTGGTTGATGAGGCGTCCAGCTGAGCCGTCCACCGTGCCAGCCTTGCCTCCAGGCTGGAGCACGGTCGGACGCATGAAGCGCGCCAGGCGCTACCGAAAGTGATTCTGACCCTCGCACCCGGGGCGTAAAGTCGCTGCTCAGAGAGT # Right flank : GCCGCTGCTCGACAGGATCCTGCACAGACTTTAGTCGTCTGGGTCGACCCAGTGATGTGGGTGCGTACATTGGCGACCATGGGGTGGAGGTCGGTCGATTGCAGAAGCCTTGCGCAAGAACTGATCGGCGACCAGGTTGCGCGATGGCGTCACGTGCAGGCTGTGGCGAACGCCGCCAAGCGACTGTCGACCGCGCCGTCTGATGACATCGTTGTCTCGGCTGCATGGCTGCATGACATCGGGTACAGCGACAAGTTGGTGGCAACCGGCATGCACGCCATCGACGGCGCCGCCTTTCTCGATCTGTTGGGCGCACCGCAGGAACTGGTCAGTCTCGTTGCCTTCCACACCGGCGCCGAGCACGAGGCGGACGAGCGTGGCCTGCTCGATCGGCTCATCCAGTTCGATTCGCCACCACAGGACCACCTCGATGCTCTCATCCTGGCCGATCTGATCAGTGGGCCCGACGGTCAACCTATGACTGTTGCCGAGCGACTGGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCTCGCGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCTCGCGGGGATGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.90,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //