Array 1 11816-11418 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH591010.1 Lentilactobacillus kisonensis F0435 Scfld430, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11815 29 100.0 32 ............................. GGGACAGAGGGATCAGGGTACGCAGTGGAAAT 11754 29 100.0 32 ............................. TTACTCATCCAGTCTCATGGGGAAGTGCAAGA 11693 29 100.0 32 ............................. GCTCCCACCCAATACTCGATGGAGCTAGGCAT 11632 29 96.6 32 ............................C TCCGACCAGCAATATCGGTGGCGGTTCCGATG 11571 29 100.0 32 ............................. CGCTACGGCTTTAGATATTGATATCAAGAGTT 11510 29 100.0 32 ............................. TTGCGTTTCAATCTACTGCTTCATATCGTCGA GGG [11486] 11446 29 79.3 0 .....G.....A.T..C..A........C | ========== ====== ====== ====== ============================= ================================ ================== 7 29 96.6 32 GTGTTCCCCATGCGTATGGGGGTGATCCT # Left flank : TCGACGAATGACTTCCAATCAGAGGATTGTTGGTTGGAGATGCTTTTAAAACTAAGAACTGAGTTAATCCAGCCGGAGAACTGAAACTCATCAATCTAAATTTGAAAGAAGGGATGCCAGTGAATCAATAAGCCGATGTGCAAACGATAAAACAATTCACCCCTCAAATAATTAATAGTAACCCTCTTGAGAAACCCCAACGATTTCTTAACTTCATGAATTACCCCTCAATATGAAAAATTCCTCAAAGCCTCTGCGTGTTAGCGGGGGCTTTTTTGTGGGGATCGAAGGGTATGCAAAATATTGTAATACTTGTTTGATGTTTGTTTTAATAGCACCGTCAAGTTTGAACTGTTTTATTTGGGAAAGTCTGGTATCCTTAAACTAGTTGTTGGAATGATACATATTTTAGCTCGTCTTTATTTGTATGTATTTTTGAAGTTAATGAAAAACAGTTGTTTTGAAATTTCGGAATGTTGGTTTGGCGGGATTTGTTTGGT # Right flank : GTAAAATGATCTTGATGATTAGCGAACGCTCTTTTTAACAAAATATCAAAATATTTAAAGTCAGCGTCCCTTAGAAGATCCTCAACTCTTTCTTTAATTATTCATGCAAATCATTCGCTTAAAGCCAACGAGGCTTTTTATTTTGTATTACTTGAACTTACTTTTAATTTGTTGCCAACAAGTTGGGTAGTAAAACATTGCCGGTATTTGGTTAATTATTGCTAATATCGCTAAAAAAACAAGTCCCAGCATGATAATCATGTTACCTAATATCATGTCAATAAAATTATGGAAAGCAAACATAAGCAGTAATAGGGCAATATATATCCACCAACTGGTAAAAAATTTGTAGCTTATGCCAATGACAAAAATTGCAATTACTAACAATGCCATGAAATCAGCTTCCCCATAGTCAAGTTATAATCTTAACTTGATTATAGTATAAATTCGGAAGTGTGACGCTTTAATTGTAGCTAATTGTTCTTCATTAATTTAAGCGT # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCATGCGTATGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.50,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 1 265987-266870 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH591047.1 Lentilactobacillus kisonensis F0435 Scfld1650, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 265987 29 100.0 32 ............................. CCTGACCAGTTGCATGATCCAAGGTGAGTGAA 266048 29 100.0 32 ............................. TTTAGGCGACCTACCATCACTGAAAGATTATC 266109 29 96.6 32 ............................C GCTAGCACTTTGGAAGCCTTGGCGTTGGAAAT 266170 29 96.6 32 ............................C TGGTATGCCGACTTGAAGTAAGCAGACCAAAA 266231 29 100.0 32 ............................. AGTCCAGCACCCTATGCTGAAAAGAAGTTAGA 266292 29 100.0 32 ............................. ATGGCAAAGCAAGAGTACACAAAGGCTCAAAA 266353 29 100.0 32 ............................. AGCCCGTTAGTAGCTCGTTTGCTTCACGATTA 266414 29 96.6 32 ............................C AACTGCGGCTGCACCAAGATGATGACATGGGC 266475 29 100.0 32 ............................. CAATGCACGGAATGTAAATCGTATTTACAAGG 266536 29 96.6 32 ............................C ATCTCGATGTCCTCTGGATCTTCCAGGATCAT 266597 29 96.6 32 ............................C GAAACTGCAAAGGCTTTGTGTCATTATTGCAA 266658 29 100.0 32 ............................. CGGGCGGATGACGGCGGGGGCAGTGGAAGGTT 266719 29 100.0 32 ............................. CTTACTAAGGTTGCCACAGCAGCAAGGGCGAT 266780 29 100.0 32 ............................. GTGGCTTGTAGTGTAAAGGGAATTATTTTTGG 266841 29 89.7 0 ...........A..C......A....... | A [266864] ========== ====== ====== ====== ============================= ================================ ================== 15 29 98.2 32 GTATTCCCCACGTATGTAGGGGTGATCCT # Left flank : ACGCGCATCAAATAAAACCGACAGATTGTGAGGAATTTATATGAACAAAATTTCTATTCGTGGCAGTTTGCAAACGAAACAAATCGTAGGTAGTTATTCCGATGTTGAGAAGAAAATTATAGCGGATTTGGACGCTGTTCAAAAGCAGGATGGCAAAAAGCCGTTCTCAAAGATTGCTGATGAAGTGGTCGTTGAACCATATCGAGATGGCGCGTATGCATACCACGCCTTATTGACAGAAGCGGCAAAGATGTACGACTTGTCGCCAGAGATTCAAAAAAGCGCAAATGTGAGCGAAGAATAAATTGATGTAGGTCGTGGAGAAAATTTCTGGTTAGTCTAATCACTTAATTGGGAATGAATTTCCGCGGCCTATTTATGTTGATTGATCAGTTGAAGGGATTGTGCTATTTTTTAAATGCTATCTGAGTTAAATCGAAGTTGATGAAAAATGGTTATTTGTGGATTTGAGAATGGTGTAATGGCGGGATTTGTTTAGT # Right flank : TGCTATCGGTTGTTTCATATCATCATATTCAAGCGTTCCGTGACCAAAGCTGATTCTACGGACTATTATTGTTGTTTTGTAGTAACAAGGGAAGTATTATTGGGGTTTACAACAAATTGGATACTTAACTATTTTTTAAGTGAGATAGGATAAGAAAAATATTAATCCCCAAAAGTTGCCCAACAATAAATGATTCCTGCTATAATTAATGTTTAATTGTCTCTTTTTATTTTACAGAACAACGTTTTTATGATTAATAACTTTACTCTAATAATACAGGGTAAACTAAAGACATTTACACTATAATCAAAGTAAACAGTTATCCTTATTTAGAAAGTGTGTATCTCAACTTATGAACAAGAAAATCATGTCCGGGTCCTTCTGGCTGTCCTTTGGCAGTATCTTTTCACGGGTACTTGGGATTGTTTATCTAATTCCATGGCTATATATGATTGGCTCACCGGCACATAAGAGCGTTGCGATGGCGCTATTTAATGCAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTATGTAGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //