Array 1 73804-75291 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUVS01000013.1 Streptococcus agalactiae SGBS003 ctg7180000000840, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 73804 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 73870 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 73936 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 74002 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 74068 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 74134 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 74200 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 74266 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 74332 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 74398 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 74464 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 74530 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 74596 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 74662 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 74728 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 74794 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 74860 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 74926 36 100.0 30 .................................... ACTCTAAATGATAGTTATGAGTTAAATGTT 74992 36 100.0 30 .................................... CAAATTACAGTTTCGACTGATTATGGAAAT 75058 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 75124 36 100.0 30 .................................... TTTTTACCAATGCTTCCATATCGCTTATAT 75190 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 75256 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //