Array 1 124331-122100 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWMI01000016.1 Bacteroides salyersiae strain BIOML-A8 scaffold16_size147399, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 124330 35 100.0 34 ................................... AGAGCCCAAATCACACCGATACCGGCACAAATGA 124261 35 100.0 34 ................................... TTATTATGCTTTTGTCCGTCTTTACCGTACAGAG 124192 35 100.0 35 ................................... TAATAGTTTATGTTTGGCAGGGTGACCCCAATCAT 124122 35 100.0 37 ................................... GCATATCCGGGGTCGGAGGAACCAGTTTGTCTACATT 124050 35 100.0 36 ................................... ATTGGGGTGTAGAAAATATCATCCTCTGTGGTGATT 123979 35 100.0 40 ................................... TCCAACGTATCCTCCGATTACCTCAACAGCGAAGTTGCGA 123904 35 100.0 40 ................................... CTTCCCGTTGCTTTTTGGTCAGCCGGTTGAGAATTTTTTT 123829 35 100.0 37 ................................... AAACTATTCCTTTGGGAAGGTTTGGCTTATGCGTAAT 123757 35 100.0 39 ................................... GGTATTTTCTTGCGCATTGATATTTGTTGTTGCAGCAAT 123683 35 100.0 36 ................................... GAGATTTCCAATATCTTACGGGTCGCTTCCTTACCG 123612 35 100.0 34 ................................... AAACAGTATCATTCATAACTTTGGCGTTTATATA 123543 35 100.0 32 ................................... ATTGAAATACGTCAATATAACGGCCGTTGTTT 123476 35 100.0 36 ................................... AAATCCAGACTTTGTGTGCCATTGTCTTCTTGGTTT 123405 35 100.0 36 ................................... AGGAGGAAATATGCATCTCCCTTTGCCTTACTGGTG 123334 35 100.0 33 ................................... GAACTCAGATTTGTAAACGCCCATACGAGCTTT 123266 35 100.0 35 ................................... ATTATCTCATCAGAAAGTCCCTGTAACTCCCATTC 123196 35 100.0 38 ................................... TAAAAGCATTTCCAAACCGTTTTCCGTCTCAATGATTT 123123 35 100.0 39 ................................... TTTAAGGAGACTGAAAGTTTCAAGCTTCAGCCGCAAAGA 123049 35 100.0 34 ................................... TTCTGGGCTTTCAGAATATTGGTGTAACAAGTTG 122980 35 100.0 38 ................................... TTTTGGAACGCTTATAGGGTTCCATTTTTACGTGTTTC 122907 35 100.0 41 ................................... CTTTTTACATTTGCGACTGTTAATTTTGCTTTCATAATCTT 122831 35 100.0 34 ................................... AGAACCGGAGCAAGAAGTCAGAACACTTAAGGCT 122762 35 100.0 37 ................................... TTCCTTCGGAGCAAGGGAACAATTCTTTAACCAATAT 122690 35 100.0 39 ................................... GGCAAATATAGCAAGTTTGGCATTGTCTTTCATGATACC 122616 35 100.0 37 ................................... ATGCTATACCCTGATTCCGATATCCGTTTAAACAACA 122544 35 100.0 35 ................................... GTCGCAGGAAGTACACATTGCACCAAAAACTACTG 122474 35 100.0 37 ................................... GGCGGCGCAGCTGCTATTCCAACCATCTTGTGTACAT 122402 35 100.0 37 ................................... ATCTTTGGGAGTAGGGAGGATTAAGAACATTTTGTCT 122330 35 100.0 37 ................................... ACATTTTTGGATCATTCGGTTCAAGATGCACCGGTTT 122258 35 94.3 35 ...................A............A.. AACTCGATACCAAGAGATGAACTCAAAGCGTCAAA 122188 35 71.4 20 .A....A.....C...T..A..C..AA.C...A.. TGTGTATGTATACTTGTGTG Deletion [122134] 122133 34 80.0 0 ......C.AT..-...TC.A............... | ========== ====== ====== ====== =================================== ========================================= ================== 32 35 98.3 36 ATTTGAGTTACTTCCAGTAGAATAAGGATTAAGAC # Left flank : TATGTGGCCAAGTGGTGAGATGAAGTGAACAAAACATGAAAAAAGGCCAAACTCTTGCGAAAAACGATAAAAAGATAATTATCTGATTTATTTGATATTATATTTTTTAGATAAATTGTATTACTTAAATCACATTCGCAACAAAATACATGTTAGCAACAAAGTAAATCATTTGCGAAAATGATTCATTACTATACAAGCGATCTTTGACGTATTGCATTTATAATCAATAATATATTGTATAATACCTCTATACCGTTTTTCGAAAATGAATCTTTTTAAAGAAATTCAAAATCATTTTCGAAAATAGATATTCAATGTAAATATCTTATTTTTAAGCAAATAAGCATATATTAGCCAAACAAATTATTGATTTTCTTAAAAATAATACATACATTTGCGAAAAAGTTATTGGAATATAGCGTATTGTATTAAATAACAATACTTTATGAGAAATATACAAAACAAAGAGTAAAAAATAAATTATTGATAATCAGATT # Right flank : AAGCAACTCTCTAAAATCATTTATATCTCATTATCCCGAATTCAGAAACAATGATACATCATACACCTTTAATTCACTCTAATAATATTACCCCATTTTAACCTCAAAATTTTTCTTTTCCAATACCACATATCCCGCATTTTCATTATATTTACCTCCAAATACGCAACACCAAATGGCAAGAGCAAAAAAGACATTCTGTGTCGTAGCATACGATATTAAAGAAGACCGGAAAAGAGCACGCGTCTCTAAAATTCTGGAAAAATATGGAATAAGAGTCAATTTCAGTGTATTCGAATGTATGTTTACCGATATCCAACTATTACAAGTGCAAGAGAAAATAAAAAAAATATTGGATAAACGCTCCGATACAGTCATATACTATCCGATTTGCGTCAATTGTTATACAAAAATCATATATCAACCGGCACATCGCCAAACGTCCCGCACTATAGAAATTGTATAAAATAAAAAGAAATCATCTGATGAAACCCAAACGA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGAGTTACTTCCAGTAGAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [19-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //