Array 1 1407314-1413105 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP018052.1 Thiohalobacter thiocyanaticus strain FOKN1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1407314 28 100.0 32 ............................ TTCCAGGATGATCATTTCATCCACCTTGCTCC 1407374 28 100.0 32 ............................ TTCTCGGGGTTGGGGTATCGGGGCTCATCCCC 1407434 28 100.0 32 ............................ AGACGATTGCCGATGCGCTTCTTGAGGTGTTC 1407494 28 100.0 32 ............................ TCTGCGCGATCCCCGGCCATGTAGTGCTTCTG 1407554 28 100.0 32 ............................ TGTTGGCCTCGTTTTGCAGGTAGCCGGGGATC 1407614 28 100.0 32 ............................ CGCATGAGCAGCACCAGGCAGTCGATCTGATC 1407674 28 100.0 32 ............................ CCGAGAAGGAGGCCCCATGAAGGTGGCAGAGC 1407734 28 100.0 32 ............................ TCCATGCGGCTGTTGCACTCCTCCAGGCTGGC 1407794 28 100.0 32 ............................ TGCTGGGTATCAGGGTCCGGCAGGGCCATGAA 1407854 28 100.0 32 ............................ ATTCAGCCTCGCTGATCGCGTCTCCGTCATAT 1407914 28 100.0 32 ............................ TGAATCCAAGGGTATCTTGGACTGTAATGCGT 1407974 28 100.0 32 ............................ TAGTATTTCTTCCCGCCTCCACGGCGGCCCTT 1408034 28 100.0 32 ............................ TACGCCGAGTGGGACTTCAGGCTCTCGTTCCC 1408094 28 100.0 33 ............................ CAAGGTCGTCTTGACCCCGCCCAGGGCCTCCAT 1408155 28 100.0 32 ............................ GTCTGCGTTCGAGACCTGCAGGTCGTCGGTGT 1408215 28 100.0 32 ............................ CCTGTGAATTTCTTATCGGCTTCAATCAGGCC 1408275 28 100.0 32 ............................ TATCTGAGATCCCGGAATCCGCCGGGTCGGTC 1408335 28 100.0 32 ............................ TCGATACCGGCCGCGCCGCAACCGATGTGCAG 1408395 28 100.0 32 ............................ TGGATCGAACGCATCTGGCCGCATGGCTACGC 1408455 28 100.0 32 ............................ AGCTCCGCGCCGGAAAGCTCTGCTACCTTCAC 1408515 28 100.0 32 ............................ ACTGCTGCCACGCCCTGCGTGAGGTGTGGACC 1408575 28 100.0 32 ............................ TGCTGCGGTATGCGCTTCACAGGCCGGATGTT 1408635 28 100.0 32 ............................ GGTTCGATGACCTCCCTGAGACCCAGCGGACA 1408695 28 100.0 32 ............................ TTTCGGGTCCGGTCCAGGGAATGACTCCGTAC 1408755 28 100.0 32 ............................ GTATGAATCCATCCAAGCCGATCAGAACCCGT 1408815 28 100.0 32 ............................ TTGAGCCAGGACACCAGGCCGCCGATGTTGCC 1408875 28 100.0 32 ............................ TCGGCAGCCATCCGGCGCAGGGCGTTGGAGAG 1408935 28 100.0 32 ............................ GTGATCCGGGTCACGCCGCCGCCCTGGTCCAC 1408995 28 100.0 32 ............................ AAAGCCGGCGCGCTCTATACGCCGCTGGATCC 1409055 28 100.0 32 ............................ TGATGGACCAGATCCGGGGCCGGTTCGATGAC 1409115 28 100.0 32 ............................ GACTGCGGGGTCGAATTCAGGAAATTGAAGTC 1409175 28 100.0 32 ............................ TGCACAAATTGCCTACAGGGCCAAAGGGTCCG 1409235 28 100.0 32 ............................ GTCCGATCGACGAAGTGACGATCGCGGAGATC 1409295 28 100.0 32 ............................ AGCACCCCGGCGACCACCCCGACCAGCAACAG 1409355 28 100.0 32 ............................ GGATCCAGCAGCTGCGCGGTGGATCGAGGGAC 1409415 28 100.0 32 ............................ GCCAGGATACCGAGTCCTGCGCCGATGATGCC 1409475 28 100.0 32 ............................ TGTGCTTATCAGCACCAGCAACACGGTGATGT 1409535 28 100.0 32 ............................ ATTCGCCCCAGTCCAGCAGCCATGTGTCGATG 1409595 28 100.0 32 ............................ ACGTCGAGAATCCGATATAGGCCCCCACGACA 1409655 28 100.0 32 ............................ ATCGAGGCGCAGGAGGGTGACGGGGCCATCGC 1409715 28 100.0 32 ............................ TCCTTCTGTTTGGCCCGCTCAGCCTCCAAGGC 1409775 28 100.0 32 ............................ TGATTGAGGACGCGCTACGGCAGACTCATGAT 1409835 28 100.0 32 ............................ TCAAGGACCCGGACGAGGCGAGGGCGCAGATT 1409895 28 100.0 32 ............................ TTGTTGAAGGCCTGCAGCTCCGGGATCTCCAC 1409955 28 100.0 32 ............................ GCGCTCAGGCCTGGCGCTTAAGCACGGTATCA 1410015 28 100.0 32 ............................ ACCCCGTGGGGTCTGGCCCTCATCGACGACGT 1410075 28 100.0 32 ............................ ACATCGGACGCGGCCAGCAGCCGGTCACGGAT 1410135 28 100.0 32 ............................ ATATCGTCGAGCCAGCGGGGCGTGTTGCGGTC 1410195 28 100.0 32 ............................ CGCTTCGGCGGGAGGGAACATGACCCGCTTTA 1410255 28 100.0 32 ............................ TCCTGCTGCTGCAGGGCCAGCTCCAGCGGGTC 1410315 28 100.0 32 ............................ TACCGAGTGGTGCCACGGGCATGGCTGGTAGG 1410375 28 100.0 32 ............................ GTGTAGGTGGTGCCGCCGATGGTAAATGTGTC 1410435 28 100.0 32 ............................ GAGGACCACGGCAGTGCCATCCGTACCGTGGC 1410495 28 100.0 32 ............................ CTATCGCCGACTGGGATTCACTCTCGGATGAG 1410555 28 100.0 32 ............................ ATAGGACCACACCCATGGCCTGACATCAGAAT 1410615 28 100.0 32 ............................ TGGAGAAGAAGGCCAACCTGATCCAGGAGGTC 1410675 28 100.0 32 ............................ TGAAGCAGCTTGATTCGTTCTCTGCCCTGACC 1410735 28 100.0 32 ............................ TCAATGAGCGCCAGTGTCTCGTAGTTGATCCC 1410795 28 100.0 32 ............................ ATCATGTCCCGCTTCATGAACTCGATTTCACC 1410855 28 100.0 32 ............................ AGATTGGCGAGTGCGCGGCCACGCTCTGAGAT 1410915 28 100.0 32 ............................ ACCACAATAAACCACCCACCGCCGAAGCACTC 1410975 28 100.0 32 ............................ TACCAGTCAAGCGCACCGGGGGCGGGCGGTCA 1411035 28 100.0 32 ............................ ACCCGGAAGAAGTCGATCAGCTCGGTCCTGAC 1411095 28 100.0 32 ............................ AGCGGGGCCGTCGATGCAAACCGGCTGTCATC 1411155 28 100.0 32 ............................ CACACCGTGGGCAGATACGCTTGTCTGTGATC 1411215 28 100.0 32 ............................ GCTTGAGTGTGCCTGCGTCGAACTGGATCGGC 1411275 28 100.0 34 ............................ CTACCGGGTAGTGCCCCGGCTCTGGCTGGTAGGC 1411337 28 100.0 32 ............................ TGCTGGCGGCCCTTGAGGACCAGGACGCGGAC 1411397 28 96.4 32 ....................T....... ATTCAGGCGGATATGTGCAACCGGGGCTACTC 1411457 28 100.0 32 ............................ TATGACAAATACCACCTGATCGTTCCCCGGGG 1411517 28 100.0 32 ............................ GCGCCGGTAAGCATCAGAGCGCCACGCGAGGC 1411577 28 100.0 32 ............................ TGAAGTCGCAGCATGAACGGGAGATGGAGTTA 1411637 28 100.0 32 ............................ TTGTGCGTGGACTTTATTTCAGTACGGAGCGC 1411697 28 100.0 32 ............................ CACTCCACCGGGATATTGATAAGCGCATGGGA 1411757 28 100.0 32 ............................ TGCACCAGTATCTGGACCCGCAGCGCGACATC 1411817 28 96.4 33 .........T.................. CACCACAGCCCCGGTGAACAGGTAGAACGGCCC 1411878 28 100.0 32 ............................ AATGGTAGGACTCCAGCCGGTCTATCCGGTGC 1411938 28 100.0 32 ............................ GCGTACCGAGTGGACTGGCGAAACGGACTATG 1411998 28 100.0 32 ............................ ACAGACCCGATACTGCGGGAAGAGACCTGGAC 1412058 28 100.0 32 ............................ TTGCCGACGATGGCATGGCAATGGATCAGGGT 1412118 28 100.0 32 ............................ CGTATCAGTTGAAACCGCCAATGGATGCCGGC 1412178 28 96.4 32 ...T........................ ACATGGAAGAAAGCGATCAGCTCCTCCAGGTC 1412238 28 100.0 32 ............................ TTCCGGGCGGCGGTCAGGTAGGCGATCTCCAT 1412298 28 100.0 32 ............................ TGACCCCCTCGACAGATGGGGCCAGCGATAAC 1412358 28 100.0 32 ............................ AAAATCCCCGATGGACATGGACTGGGGCTGGA 1412418 28 100.0 32 ............................ TGCAGGCCCTGCCCAACGCCACAGAAGAAGAA 1412478 28 100.0 32 ............................ TGTCACTACCTTGTGCAGTCGAGTAATCAGCT 1412538 28 100.0 32 ............................ GCTGAGGCGGGAGGGAACTGAATGACCCGCTT 1412598 28 100.0 32 ............................ GTGGTCGCCCTTCTCGCTGGTGATCGCCTCAT 1412658 28 100.0 32 ............................ CGGTCAATTTCGGGGTAACGGGCGAAGTTTGT 1412718 28 100.0 32 ............................ AATAGGATCAGGCTCCAGATAAATCGTCCGTA 1412778 28 96.4 32 .....................A...... TCGCCCGAGAATGAGCGGAAGCCTGCTATGGG 1412838 28 96.4 32 ....A....................... GATATAGATAACGGTGAAGCCGGCATTGGTGA 1412898 28 96.4 32 .................T.......... ATCCCCGACCAGGCGGTCTTCGGGACGGTCCA 1412958 28 96.4 32 .........................G.. TACCCGCGTACCGACTGCCGCTACCTCAAGCA 1413018 28 92.9 32 .......A................A... TTGAAGGTGCCGTTGGTGTGGTCCACGGTGGC 1413078 28 89.3 0 ............AC...T.......... | ========== ====== ====== ====== ============================ ================================== ================== 97 28 99.6 32 GTTCGCCGCCGCGTAGGCGGCTTAGAAA # Left flank : TCGGTATGCAAAGCAGCTGTATGCGTTGCACGCTAACGCATCAGCAATAAAGTTTTCGCGTACCCCAGGTGAAGTGTCGGGTGACGAGAAAAACCGGAGAGCGAATTCATTTCTCGATCACGGAAATTACATTGCCTACGGGTATGCAGCCGCGGCGCTTCATGTGCTTGGGATAAACTATGCGTTCCCAGTGCTTCACGGGAAAACGCGCCGGGGCGCATTGGTATTCGATGTCGCCGACCTCGTGAAGGACTGGTTGATTATGCCAGCGGCTTTCGATGCGGCCAGGCGAAAGGTAAAAGATCAAGCATTCCGGGCCACGGTCATCGAGCGCGCCATACAGTATGAAGTCCTGGATATATTGATACCCTTTCTGAAATCGGTATCATCGAAATATATTTGATATCAGTAAGTTACAGAGTTCACGCTTAACGAATCCTTGCACCGGGTTAATTCATGTAACCCGTTGATGTTATTTAAAAAGTTGGGAAAATTCTCTT # Right flank : ACGCGTGACACCGGGCTTTCGGAGCTGCGGGAGGTGGGCCGCCACTGCGTGCCCGGCTTTTACGCTCGAGGAGCTGGGTGAGTGGAGGCTGGACCGGGATCGGGAACCAGTACTTCCATTCACCGGCCTGGATGGCCTCCAGCGAGGCACAAGTACCCCAGGGGAAATCCTTCCGGTTCGCCTTCGCGTCGTCCCCAACTGACCATCCGGAATCCGCATGAACGGGTGCGCACCGGCAGACAGATGCCGGGCACAGAGAAATGGACTCGGATGTCTCGGCCGAGATAGGGGTATTTCACAGCGACAATCACCGTAAAAATATACAGTATGTAGTACTGGGATATCTGGCAGAATTTCTGTATATTTCCGGTTGTTTTCTTCGGATCAGGAGGACCCAGCCATGTGTGGCCGCTTCTCCAGGACCAGTCCCCCCGAGACCTTTGCCAGCTTGGTGGAGGGTCGAAATGATATCGATGACTTACCGCCGCAGTACAACACCC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCCGCCGCGTAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAACCGCCGCGTAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2971623-2966522 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP018052.1 Thiohalobacter thiocyanaticus strain FOKN1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2971622 29 100.0 32 ............................. ACCTTTACGACAGATGCGGTGCTGCCTGTTGG 2971561 29 100.0 32 ............................. GTAACTTTCGGCGGACGTACAGACCGCGCTCA 2971500 29 100.0 32 ............................. GCTGTCGTTCCGAGCGGCCAACCCATCATCCA 2971439 29 100.0 32 ............................. CAATGCCATCAGGTCTTTCATGCTACCTCCCC 2971378 29 100.0 32 ............................. GTGGTGACAGCCGCAATTGTTTGTTGTGTTTT 2971317 29 100.0 32 ............................. ACATTGCCGGTGGAGCCGGTGTCGGTCTGATA 2971256 29 100.0 32 ............................. TTGATCTTGCCGCCGAACTCGGCCGCATCGAA 2971195 29 100.0 32 ............................. GTGCACGGGCGCGCGCGAATCCGCCTGGCCGC 2971134 29 100.0 32 ............................. ATGTTCACGTCAATCAGATCAGGAGGGCAGGT 2971073 29 100.0 32 ............................. ATTTGGTGTGCCGATAACGCCAACAGCATCGG 2971012 29 100.0 32 ............................. TGATCAGCATCCGCCCCGGCGGGAGGTGAACT 2970951 29 100.0 33 ............................. CGCACCACCCGTGCCCAGAACTTCCTGCAGCGC 2970889 29 100.0 32 ............................. AAGCTGGAGATCGACCACCGCCAGGCCACGCT 2970828 29 100.0 32 ............................. CCAACCAGAATGGGGATGAGGGCTGGCAGAAC 2970767 29 100.0 32 ............................. CCTGGACGGACGGCCGCAGCATCCCGACCGAT 2970706 29 100.0 32 ............................. CAGGTAGAAATCCTCCGCACTGGCATTGCTGA 2970645 29 100.0 32 ............................. TAAATACTTTTCGATGTGGTACAGGTCCGGGT 2970584 29 100.0 32 ............................. GTTCGCCACTATGCCTATTACGCCACTTTCGC 2970523 29 100.0 32 ............................. GACGCTCAGGAGCTACTGAGTAAATACCACCG 2970462 29 100.0 32 ............................. CCATATTCAGTATCACACCTGGAAGCAGCGGA 2970401 29 100.0 32 ............................. ATATAAGCGCCGAGCCAAGCTCGCCGCCGATT 2970340 29 100.0 32 ............................. TTGACTGATGGGACTCAAGCGTGATCCTAAGA 2970279 29 100.0 32 ............................. CTGGATGAGTACAAACGCCAGCAGCGTCAGCG 2970218 29 100.0 32 ............................. TAGAGCGCGTCGCCGGGAATTGTGTAGCTGTA 2970157 29 100.0 32 ............................. GTCTGCGCCGATTTCGATGCAGTGCTGGTAGA 2970096 29 100.0 32 ............................. CGGCTCATGCGGGAGAGACGCCTATACCCACT 2970035 29 100.0 32 ............................. ATGACCCCAGCCGGAAAGGTGTCATATCTCGA 2969974 29 100.0 32 ............................. CGTTGCATGTCTTCAGGCGTGCTACCGCCCTG 2969913 29 100.0 32 ............................. GATGCCCACAAGTGGTGTCAGGACACTACCGA 2969852 29 100.0 32 ............................. CCTTTTTTACCGCGCAGATACTCGGGGCCGAT 2969791 29 100.0 32 ............................. GTGCCGGGCGCCCGTTGACTGGCAATTGTCAG 2969730 29 100.0 32 ............................. GCGAATTTGCCCGCCCACAGGCCGGCGGCCTT 2969669 29 100.0 32 ............................. CCCGGTTTCGGGATTCGCTCTGCCTGTTGCCC 2969608 29 100.0 32 ............................. CCCGGTTTCGGGATTCGCTCTGCCTGTTGCCC 2969547 29 100.0 32 ............................. CCAGCGACAGCGGCAACAGCGATGATCAGGGT 2969486 29 100.0 32 ............................. GCATGTCGGGATCAATCGGCAATTACTGGCCA 2969425 29 100.0 33 ............................. ACGCCATTGGCGCCCCGGTAAAACACGTTGTCC 2969363 29 100.0 32 ............................. ATCGGCACCGGCGATCCCAACGATCCGACTCC 2969302 29 100.0 32 ............................. TGGTCGGCATGCTGACTTCGTGGCTGTCGCAG 2969241 29 100.0 32 ............................. GTCGGCGCTACAGGCAGTGGCACCGGACAGGA 2969180 29 96.6 32 ............................A CCGCCGATGTTTCCACCAGGATTGCGCTCGGC 2969119 29 100.0 32 ............................. GAATTTTAGGGCATGACTGACATGCTCGAACG 2969058 29 100.0 33 ............................. AGAGTCGATCAGCTCCGCATGCAGGCTCTCCGC 2968996 29 100.0 33 ............................. CACTGCTGACCAACTTCGGGATCTTGCCAATGC 2968934 29 100.0 32 ............................. GGACTCTGTGTATTGTAGGCCCGCCACAGACC 2968873 29 100.0 32 ............................. GACCGCGATTGGGCAGGAGAGCAGCAGGAGCG 2968812 29 100.0 32 ............................. GCACGATACATGTGGGCTGACGCAATGCTCAA 2968751 29 100.0 32 ............................. CCACTCTAACCGACGCCAGGACTAGCGGCCTT 2968690 29 100.0 32 ............................. GGCTCCAACCGCTATGTGACTGTTGACCTGGC 2968629 29 100.0 32 ............................. GCATGGGCTTGAAAATCTACGGAACAAGCGCA 2968568 29 100.0 32 ............................. TTTGTCGAGTCGACGCCCTCCAGCTCGAAGCT 2968507 29 100.0 32 ............................. GTGATGATCCCCGTGGTGGTGTCCACGGCCCA 2968446 29 100.0 32 ............................. CCGGCAGGGCGCATTACCGGGCGTCTCAGTAT 2968385 29 100.0 32 ............................. GCGGCCGACAGCAAGGGCCAGGGCCCCGCCGA 2968324 29 100.0 32 ............................. ACTACCGCGACTGGCTGCGCCGCACCGGGGCG 2968263 29 100.0 32 ............................. CACAAACTCCCACACCGGGCCATTGGCCTCTC 2968202 29 100.0 32 ............................. GCGACGGAATCGCCGGCGTGGTATCGGGGATC 2968141 29 100.0 32 ............................. ATCGGATGCGAGCGCCATTCCATTGATGAATG 2968080 29 100.0 32 ............................. CCAACCTGGAGCAGATCGCCCGCGAGAAGCGC 2968019 29 100.0 32 ............................. ACATAATGGCACTGATGGAAACACAGCAGATG 2967958 29 100.0 32 ............................. GTCCGTCCTGTGGACTCTGTGGGCGACCCGGA 2967897 29 100.0 32 ............................. GCGCCGACCTGGGTGGGGATGACCAGCGGGGC 2967836 29 100.0 33 ............................. GTGTCACGTGCGGCGCGCGCAGCACCGCCGTAT 2967774 29 100.0 32 ............................. TCTTCGGCTTTCCAAGATACACCTTTTTTCGG 2967713 29 100.0 33 ............................. TAGAGCAGACTGGTTAAAAGAGGTACGTCAAGA 2967651 29 100.0 32 ............................. ACCTGGTGCCCGTCCTTGAAGGCCCACAATTC 2967590 29 100.0 32 ............................. AACACCCGGCAGGCAACAGCGCGACGATCAGC 2967529 29 100.0 32 ............................. GAAGTGCCGCCGCGCTCCAATACGATTTTTCC 2967468 29 100.0 32 ............................. AAAATGGAAAATGTGAAATATTATATTGTGGT 2967407 29 100.0 32 ............................. CGGATATTCTCAATCCGTTGGGTAAGCTCGCC 2967346 29 100.0 32 ............................. AAACCTTCCCCGACGCGGGCTATGTCGGGCAT 2967285 29 100.0 33 ............................. CGCCCAGCAGGATCCGGAGATCTTCAGCACACC 2967223 29 100.0 33 ............................. TGCCCCTTTACGGTAGAGAGGTCGGTGGCAGCC 2967161 29 100.0 32 ............................. TGAGGACACCGCACAGAAACAGCGGCGGCGAA 2967100 29 100.0 32 ............................. GTCTCTGATTCTGAGAGTTGCGGGGCATAATC 2967039 29 100.0 33 ............................. TGCCCATGCAGCGGTATGAACTCGTGCCGCCCG 2966977 29 100.0 32 ............................. CTGGCAATATCAGCCACTGTCACCTACCCCTG 2966916 29 100.0 32 ............................. TCCGCGCGTTCCACGCTCATTCCTCACCTCCC 2966855 29 100.0 32 ............................. GAAGGAGACACAGCAGAGCCGACGCTTGTGAC 2966794 29 96.6 32 ............................A TATGTCCTTCCCATCCTGCTGCGGGACGATGA 2966733 29 100.0 32 ............................. GCCATGGCGCCGCAGAAGTCTTTAAGCCGTCT 2966672 29 100.0 32 ............................. GGTGGCGTGACGACCGCCGCCGGGTTCCCGCT 2966611 29 100.0 32 ............................. CCGTGTTAGCGCTGATATCTGACTGATTCGCC 2966550 29 96.6 0 .........................G... | ========== ====== ====== ====== ============================= ================================= ================== 84 29 99.9 32 GTGTTCCCCGCGCCTGCGGGGATGAACCG # Left flank : CCATGATCAACGATGTTCTGGATGCGGGTGGTGAGAAGCCGCCAGAGCCGCCGCCTGAAGCAGTCCAGCCTGCCATACCCAACAAAAAGGGCTTGGGCGATGCTGGTCATCGTAGTTGAGAATGCACCACCACGTCTGCGAGGACGACTCGCTGCCTGGCTGCTCGAAATCCGTGCCGGCGTTTATGTCGGGAACTATTCGGTCAAGGTGCGAGATATGATCTGGGGACAGGTTGAGGCAGGCATCGAGGATGGGAACGCCGTTGTCGCGTGGCGGACTAATAATGAAGCTGGATTCGACTTCATAACTCTTGGTGTCAATCGGCGTATTCCCAAAGACGTGGACGGCATGAAACTTGTGACCTTTCTTCCCGAAATCCCCGATGAAGAGGATTTCAGTGCTCTTTAACAATTCGGAAAAATACATCAAAATCGGCATGATTTTTCGGTGGAAAATTCACGGGTCATTTTCTTTCGATAAATCATAAAGATGTAGGAAGT # Right flank : GACTTTGTGCGATACACCAGCAGCGAGACAATGTGTTCCTTGCGATTGCTGACGATTTGTTTGCTTATAATTCCATTGAATAACCTCTCATATATCCTCGTGGTTAACTCCAGTAATCATAAGTACCATGTCTGAATGCCAGATTACACGTTCAATACTTAAGGGGTTTCTGATTAATCCAACTCCGCTTTTTTGTTTGCACACCGATGCAGTCGAGGATATATCCACCAGTCAACGCTGACGGCGAGCATTTTCCCGCAGCCGCTTCCACAGGGTGGTGCGCGACATGCCCAGGCGGCGGGCGGCCTCGGCCTTGTTGCCGCCGGTTGCGCGCAGGGTCTGCCGGATTCGTGTCCATTCGTCGGCGTCGTTGATCGGAGCGCGGTAGTAACGGGTCAGGCCGGCCTTGCCCGGTGCCGGTACTGCGGACAGCACCGCGTCGCCGGCGATGTCCGGCGGGAGATGGCGGGGCAGAATGCGCTCGCCGTCGCAGTGGACCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //