Array 1 1835-3385 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZJP01000160.1 Clostridium sporogenes strain 87-0535 contig00049, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 1835 29 100.0 39 ............................. TTTTTTAAATTACCTGTTTCTTCTCCTATTCCTTTAGAG 1903 29 100.0 38 ............................. CTCGAATTGCAAAGTTCTATAATGTAAGGGTCTTGTCT 1970 29 100.0 36 ............................. CGTAATATATAGAAGTGAATGTAGAGCATTAATTAG 2035 29 100.0 36 ............................. ATAAAGGTGTAAAATTTAACTCGATTAATAAGCTAG 2100 29 100.0 37 ............................. TCATTTGAACTCGTTTTTATTATATGTTCTAACATTG 2166 29 100.0 40 ............................. TATTGTTACTAAATACAAAGAGGGTTTATATGGCTAAAGG 2235 29 100.0 38 ............................. TTGGGCTAAATATTCTACTAATCCGCCTGTTTCGTCGC 2302 29 100.0 38 ............................. TTTACAAATTTAACATCTACATTTCCGTTATGCCAACT 2369 29 100.0 37 ............................. TTATCTTCTCTGTATTCTTCTATATCAGATTGTATTC 2435 29 100.0 38 ............................. AAACTTCTTCTTTTAGCATTATCTTCTGTTTTATTCCC 2502 29 100.0 38 ............................. TACACATGCATTTTCTACACATGATATATCCTTCATCG 2569 29 100.0 37 ............................. ATCTCTTAACATTTCCACTTCTGCATCAGTACATTTT 2635 29 100.0 37 ............................. TTTTAATAACTAATTTCTCTAAAAATAAAATAAGAAG 2701 29 100.0 36 ............................. CTAACATAGTTATATTTTGGGCTTTCAGCATCTTTA 2766 29 100.0 38 ............................. CTTTTTAACAATTTCTTATTATGTTTATTAATTTCTTG 2833 29 100.0 37 ............................. CAAGTTTTCATTTCCAATTCTGTCATGGTTTTTGCCT 2899 29 96.6 37 A............................ TTTTAAACTTCAAATATATCTTTTATTTCATACTCAC 2965 29 93.1 36 ................G...........A TTACAAGAATTTTTATTTGTTGTAAAATTAAAATAA 3030 29 89.7 38 .........C.....C........A.... TTACTTAATTTAGGTTTTATGTTGACCTTACCGGATTT 3097 29 89.7 33 ............T........C....T.. ATTAAACATCAACCAATTTTGAGCTTGCACTGT AG [3121] 3161 29 96.6 36 ........................A.... AAATTTTCTATGTTCACTATTTTCCCAGCATGTTCA 3226 29 93.1 36 .......................C..G.. ATTACATATGTAGCAAATGCTACAGCAACAAAGATT 3291 29 89.7 37 ...............C........AG... GCGCTTGCAGCTCTAAGTAAACATTTCTAAGTCTTAC 3357 29 86.2 0 A.............G.........T..G. | ========== ====== ====== ====== ============================= ======================================== ================== 24 29 97.3 37 GTTTTATAGTTCCTATAAGGAAGTGAAAT # Left flank : TAAAGAGTTTTTAATCAGTATAAAGAATAATATAATAGCAAAATACAATTCATTTTATAATGAAGAATATAAAGGAATTTTAAATATAAGTATATTAGATGCAAACAATATAAGAAAGAAAATAGATAAATATAAGAAGTGGATATATGAAGGATATTTAGGTGGTTTTATAATAGAGGGAGATACTGAGATAGTAGAACTTGCTTATAGCTGTGGATTAGGTAGCAAAAATTCTCAAGGCTTTGGATGTATTGAGACATTTAAAGATCTTAATGGTATTAAAAATTATAGCAGAATAGTTTAAATTTAAATATTTTGCAGCGAGCTAACTTTTTTATTATATGTATATAAAGTATTGATTTAACTGAATTTTTTAAAGATTAAGTGGGTTTTATAAAAACATTACTGAAGGTTTACTGCAAAATCCATAGATTTAGGTGATTCTTAACATTGTTAAAAACAAGATGTAGCCTTATTTTATGGTAATTTTGAAATTGGGG # Right flank : TAATTTTAATAATATTTAATTATTTGTATTATTTTTTATTGGGGGGAAATTTTTAATCTAACATAGTTTAAAATTTACTATAACAAATAAATACTATTAAATCCTTTATAAGTAAGTTTAAAAAGAATTGTTATTTGGTATAATGTATATAAGCGTAATTACTAATTAGTAACCTTAATTGATAATTAAGTATTGAGAATTAAACATATGTTAAGGAGGTGATAATATGGAGTTTGATATTTATACATTAGTAGAAAATGATGAAATAGAGTGTAAAGAGGCTTTAGGTGGATTACCTAAAGATTTATGGGAGACTTATTCAGCTTTCGCCAATTCTAATGGAGGAACACTTTTTTTAGGAATAAAAGAAAAGTCAGCGAAATTCTTTTTTACAGGAGTTAAGGATGAAGAGAACATAATTAAAGATTTATGGGACAATTTAAATAATCCTAAAAAGGTAAGTGCAAACATATTAGGTAATAATTCAATAGAGATTCTTA # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATAGTTCCTATAAGGAAGTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.10,-3.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //