Array 1 168554-164664 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKHN01000002.1 Corynebacterium riegelii strain UMB0243 .21837_8_68.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 168553 36 100.0 35 .................................... CGACTAGTGGGGAGCAGTTCAGCCAGGGCGGGGGT 168482 36 100.0 39 .................................... GCACACGTCGTCCACGCTTAAGCCACGCACGGAACCCAG 168407 36 100.0 35 .................................... CGGACACGCCCATCTGGAACATCACCTGCGCGTAG 168336 36 100.0 38 .................................... TTGGAAGACTCCGACGCCTACCACACCGGAGGATCTAC 168262 36 100.0 36 .................................... CAAGCAGCAATCCGCGCCGGGTGGCTGTACGTAAGG 168190 36 100.0 37 .................................... AGCGCAAATTATCTCGACAAGTCAAGGGTTCTAATAA 168117 36 100.0 37 .................................... GTTTGCCGGAGTTCACGGCACAAGAAAACCTAGAGGG 168044 36 100.0 37 .................................... ATGCCGACTATGGCTGACGCGATGGCCCGCTTTACGG 167971 36 100.0 38 .................................... CTATACGACCGCGCCGAGATCGAAGCCCTGAAGGATGA 167897 36 100.0 34 .................................... GCCAGCTGGCCTAAGCACGCGGACGGCAACCACG 167827 36 100.0 38 .................................... TCCAATGAGGGCGGCAATTACGGACCGGACTACGGCAG 167753 36 100.0 35 .................................... TTTATGTTGTCCCTGTGGCAGCGGCGGCAGTGTGA 167682 36 100.0 37 .................................... AGGACGCGGGCAAGCTGGATAAACCGGACGCTGCCAC 167609 36 100.0 39 .................................... AAACAGGGCAAACACGTATACAGGCTGTTGCAGAGGCAG 167534 36 100.0 38 .................................... CCCCGTCACCTTGCGAAACCGTGTGCGCCTGCTCCAGG 167460 36 100.0 37 .................................... GGACACATCCACACACCGGAGGAGGTGGAGCAGTGAG 167387 36 100.0 37 .................................... GGGCGAGCTTTCGCACGACCGCGTAAGGCCTAACGAT 167314 36 100.0 37 .................................... GGACACATCCACACACCGGAGGAGGTGGAGCAGTGAG 167241 36 100.0 37 .................................... GGGCGAGCTTTCGCACGACCGCGTAAGGCCTAACGAT 167168 36 100.0 35 .................................... CGCGCATCCGTGGTACGCACAGACCTAGTTCCCTG 167097 36 100.0 39 .................................... GCGGCAACGTCACACCCCGCGCCGGGTTCTTCTTGAGCA 167022 36 100.0 36 .................................... CCCTCGGCGTTGACCCCGAACGGGAAGCGGTACAAG 166950 36 100.0 38 .................................... AGGCCGTAGACGGGGCCGTCAAAGCACCAGTGTGGATA 166876 36 100.0 34 .................................... GTGGTGATGGAAGCAGTAAGATTATCAAGAGTGA 166806 36 100.0 39 .................................... TTCAAGACCGGAGAGGACGGAAAGCTCATGGAGGTCAAG 166731 36 100.0 39 .................................... TCAGGATAACGCGCCGCAATGACGCGGCACCATTCCGCA 166656 36 97.2 34 ...............................A.... ATCGATTTCGTACACGGTGCGGTTGTCGCCCTCT 166586 36 100.0 37 .................................... ATCGTGGCTACCACGGAGGCGGAGACGATGGACAGCA 166513 36 97.2 37 ..............A..................... GCATCTAAGCCCATCCCAGACGTGGTTCTCCTGGCAG 166440 36 100.0 35 .................................... TCACACTGTGACGATGAAGAAGGTCGGCAACTTCG 166369 36 100.0 34 .................................... GTGTCAGCGCACTCCAGGGCGACAAAAACTATAT 166299 36 100.0 36 .................................... GCGGCTGTGGTGGAGATTAGGCCTGGTGTGTGGCGG 166227 36 100.0 39 .................................... GCACCAGCAGCAGCGCGGGAAAACGAGGCAGCGCGGGAA 166152 36 100.0 39 .................................... GTTGCAGCAAGCGCCTGACCATGCTGCTTCCACTCTTCA 166077 36 100.0 39 .................................... CTGCGCAAGCCGGAGGGCAAGCCCACCCTGGTGCCGGAG 166002 36 100.0 36 .................................... GCGTTGTTGGCACTCATGGCGCTCTACACCACCTGG 165930 36 100.0 34 .................................... TGCATAGCGCACGTCGCCAAGACCCGCTTAAGGG 165860 36 100.0 34 .................................... TGCATAGCGCACGTCGCCAAGACCCACTTAAGGG 165790 36 100.0 36 .................................... CTCCTTATGGGCGTGAGTAAACCCCCGCACCGTGTG 165718 36 100.0 35 .................................... TTACGGGTCGCGGCTGCCTCGGCTGTGATGTGCTG 165647 36 100.0 37 .................................... GCGCTGATCGACGTACTCAAGCCGTGGCTGTCTGAGG 165574 36 100.0 37 .................................... GGGGGTTGTCGTCATAGAACGCCATAATGCCCTCAAA 165501 36 100.0 39 .................................... GCATTGGTGGCGCGCGGTACTGCATAGTCTCATTGCCAG 165426 36 100.0 37 .................................... GACAGGCCGGTACGAGGTTGTCTGCGTCGTCAGTACC 165353 36 100.0 34 .................................... TGGCTGTACGAGCACAAAGCAGCCATTGCTGAAG 165283 36 100.0 35 .................................... CGTTCATCGCGTCGGTAATGTCTGACTGCGCCAGC 165212 36 100.0 35 .................................... GCCGCAAACGTGCCCGGAATGATCTGCAGCAGACC 165141 36 100.0 37 .................................... TCCCCAGGTCGAGTCCTGGGCGCAGCACTGGGGGTGG 165068 36 100.0 38 .................................... CTGTAATCGTTTTGACGTTCAGCGCCGGGCGCTGGTGC 164994 36 100.0 39 .................................... GTCTTCCTGGCTCATATCCAGGGCAAGCCTGGCGTTTCG 164919 36 100.0 38 .................................... CTCGACGAAAAGTACGCACGCAGCATCGACCCCGCGAC 164845 36 100.0 38 .................................... CGATGTGTCCGACCACCCTTGGATTGATTGGGTCGACG 164771 36 94.4 36 .....A.......G...................... ACCACAGGGGAATTACGCCACGCATCGTGCGTCACG 164699 36 97.2 0 .............G...................... | ========== ====== ====== ====== ==================================== ======================================= ================== 54 36 99.7 37 GTCGCCGTCCTTTACGGGACGGCCTTTCATTGAGGG # Left flank : GTTCGATGAGCCGGGACGATACACGTCGAACGCTTATCTGTTACGACATCATCAATGATCGTCGACGCACACGCGTCGCTGATGCACTGTCAGAATTCGGAGACCGGGTGCAATACAGCGTCTTTGTTGTGGATATCTCACCCGCCCGACTTCTACAAGTAAAGTCCCGCCTGAACACGATTATCGAGCCGGGCGAGGATTCCATTCTTTTCTGCGACCTAGGTCGAGTAGCGGAACTGAGCGAAACAAAGTTTGGGTATCTTGGAAAGTCGCGGGAGGTGGCAGACAATGACGCACTGATTCTCTAGCAGAATTGGCGGCTAAGCTACGAGCGCGCCGGTGTCACGCAAACCCCGGCTTACGCTCGCGCGGTGAATCGCCTGCTCAAAATCGAGAACTCAATAGTGGATGATTTTTGAAGTGCAACGTCTTGTAGAATCGTCTTCGCGCTCGCGAAGCGCTGGATTTACCCTGTTCACTGGTGCTGTTTTTCAGCCCCA # Right flank : GCGCGATCGAAGTCCCAGCCAGCGGCCAGGCGGTGTGGTCGCCGTCCTTTACGGGACGGCCCGACACCCCATAGAAGCGATCAACGGGTAGCGATTTTCGGCCATTTTTTGGTAACGACAGCCCGGAAACGGTCTCGGCACAACAAAAACGCCTCTCCTATTTGTGCAGGTAGAGGCGTTTTTGATGTTTTGAGGGGGTTGTTCGAACAATCAAACTAGATTCTTCGAAACCCCCAAAAGCGCCCCAGAGAGAAAAAAGCGCCCCAGAGAGGAATCGAACCTCCGACACCTTCTTTAGGAGAGAAGTGCTCTATCCACTGAGCTACTGGGGCAGTGGCGCTAGATTACCGCAGCGCCGCGCGGGTGTTGAAATTGGGCTGTTGAAATTGGGCTGGATCACGCTAGCGGTTGAACGGGGGCGCGATCCAAGTAAACGGCTGATCCAGAAGCGTCGTGCCCAGTTTGGAGGGGGTGAGGGTGAACGCGGTGCCGTTGTCAGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCGTCCTTTACGGGACGGCCTTTCATTGAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.60,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 9315-9464 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKHN01000012.1 Corynebacterium riegelii strain UMB0243 .21837_8_68.12, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9315 28 100.0 33 ............................ GCGCGGCACGTTAGATCAAGATCTTGATCTAAA 9376 28 100.0 33 ............................ CATGTAGGAATCACTACAGGTATTACGCCGAGC 9437 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 3 28 100.0 34 GTGCGCCCCACGCAGGCGCGGGGGCAAT # Left flank : ATGACCACACGACACCTGCCCCGAGACGATCAACCAGGCGACTACACCGGCTGTTGGAACCAAGTACACGTGCACACCGTCTACCCAGACACCAACGCAGGCGTGTGGCACCTAGGCCTACCCGAGGGCAACCACGCCGGCAGCTACTGCACAACGTTTAACCCAGTGTGGGGTTGCAACCTGTCCGGCGCGCACTTGCGTACCACCACAGGAGGCACCGCCGTCATCAGCGACCGGGGCGCAACCGTTGGGCAGCTGGTACGGGACCTGTTTGCCCCGTGGGAATTTAAAGGCACCCCGCTAGAGGTATGCCCGGCATGTCTCACCCTCGCACGGGCAGAGGCAGAACTAGTTAGCCAACGTAAGTACAACGTGCGTGCGCTGCTAAGGCAGTTTGAGGCACCCGAGGTACCACCGGCGTAAGTTCAACCGCTTAGACGGCAAAATTCACCAGGCATTTTACCGAACACCCCGCCCCGTAGTGCCGCTGGTTAAGGAGG # Right flank : TGAGCTGGAACCAGGTGGTGAAATTCACCACTTGGTACACCCCGCGCGGGCAGCCCGGCACAGGAGCAACACCCCCCGGGTAGGCCTCGGAGAGAGAGAAAACCTGACTGGTGGGCAACCGTGTGGAGTCAGCCACCTATACCCCCTAAGATTTTCGGCCCCCTCCTCTGGCATCGGGCCTGCCATCCATTGAACGGATACCGGGTAGCACCGAGGAGGTGGGGCAGCCGATTAGGTTACGTGCCCCGGTAAAAACGTGTAACCCGTACACAGCGCGAGCACCTATGCCCTCGGGGGCGTTGCGAGGAGGCTTGGGGAGGGGGTACCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGCGTGCAGTGTTCCCCCGGCGTGGGGCGCGGTGTCGGCATGCTGCTACGTGCACCGTGTGTGGCGCCACCTAGGCACATGCATAG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCCCCACGCAGGCGCGGGGGCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.70,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //