Array 1 27017-28203 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSYC01000034.1 Corynebacterium diphtheriae bv. mitis strain 1482 Contig_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 27017 28 100.0 33 ............................ TGGGTCGAGGATAATAAGGGCAAGCTGATTGCC 27078 28 100.0 33 ............................ GGAGTCACCGTAGGAAACCTCGAATCAGACCTC 27139 28 100.0 33 ............................ CACATAGCAGTCATCGCGTTCAATGAGTGACGG 27200 28 100.0 33 ............................ CCACCCTCCCATGCTGGGATCTCGGGCCAGACC 27261 28 100.0 33 ............................ TTCGACTGCTTGGTGTAGGCATGTGATCGACTG 27322 28 100.0 33 ............................ CACATAGCAGTCATCGCGTTCAATGAGTGACGG 27383 28 100.0 33 ............................ CGCTGCCGGATACCGTCGCCGCGGCCGTGGACC 27444 28 100.0 33 ............................ CTCCACGAGGCTTAGTCAAGATTCCGCGTTCAG 27505 28 100.0 33 ............................ TGTAATTGTCGTGGCGTTTTTGTCGGCCCAGCG 27566 28 100.0 33 ............................ TCTTCTTGATTTTTACGGATGGTTTCCAACACG 27627 28 100.0 33 ............................ CATTGATTCTGTGACGATCGAGTCTACGATTTC 27688 28 96.4 33 ..............G............. GATCTTGGCGGGGCGGGTGTACCAGCGGTGGAC 27749 28 96.4 33 ..............G............. CTAGTTATGGGTGAGCCAACAACGGTAGACAGG 27810 28 96.4 33 ..............G............. TGTGGAAGAGTTTGATGCTGGTGATGCTGACGG 27871 28 96.4 33 ..............G............. TTTGTGACAACGTTTTGGGCGATTGTGGTGTTG 27932 28 96.4 33 ..............G............. TCAAAGGCGCTGGTCAGGGCGTCGAGGATTTCC 27993 28 96.4 33 ..............G............. GGCGCCGATCGAGCGCATAGCACCAATGCCTTG 28054 28 96.4 33 ..............G............. TGATGATTACCGCACAAGAAGTTGAAGCGTACC 28115 28 96.4 33 ..............G............. GTCGCCGGATTCGCCACCGTCGCCGCCGGCGCA 28176 28 96.4 0 ..............G............. | ========== ====== ====== ====== ============================ ================================= ================== 20 28 98.4 33 GGCTCATCCCCGCTAGTGCGGGGAAAAC # Left flank : CTGATCTTTCCCTTTTCGAGCAAGCTGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCACGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATACCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCTGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCACCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTCTCTACAGAATACACCTTATAGATATTAAAAGTTAATTTTTTCAAAATTTTTTAGTAGACCCATCATTTACTGATTTCTCTGAATGAAAACACAGATCCCAAAACCCGTTCTTCAACAAAGATTCATCCACCCTGCTAGTGCAAGGAATCACGGCGGTCCAGTTCTCAAAGTCCCTG # Right flank : CACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTGTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTATGCGTCTTCCTTTGGGCAGACCTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTAAACGAGCCTCTCCTCTTTCGTCGAAAAACAACGCAACTTGGCCTTTAAGCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGAATCTCTACGTGTCATTTGGGCTGGCAGACGCACTGTGTTTCCAGCCAATGCCTCAGCTTCTTTCCAAGTAA # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCCGCTAGTGCGGGGAAAAC # Alternate repeat : GGCTCATCCCCGCTGGTGCGGGGAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //