Array 1 160744-160082 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAICDZ010000004.1 Clostridium estertheticum strain CF001 contig00004, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                    	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	===================================	============================	==================
    160743	    35	  94.3	    28	..................A...........T....	TTATAACAATATAAACCTTTTAATACTG	
    160680	    35	 100.0	    28	...................................	TCCTCACAACCTAGCAGAGTTAATACTG	
    160617	    35	 100.0	    28	...................................	GACGCACAATCTAAAGTATCTAATGCTG	
    160554	    35	 100.0	    28	...................................	TTATCACATGCTAACTCATCTAATACTA	
    160491	    35	  97.1	    28	..................A................	TGCAAACAAAGTAACTCATCTAATACTA	
    160428	    35	  94.3	    28	..................A...........T....	TTATAACAAGATAAATCAGTTAATGCTG	
    160365	    35	  97.1	    26	..................A................	GACGAACAAGCTAAATGAGTTAATGC  	
    160304	    34	  80.0	    28	...A-...T..GT.....A....T...........	TCATAACACCATAAAAAAGTTAATGCTG	
    160242	    35	  91.4	    28	...C..C...........A................	TTATCACAATGTAAAGTATATAATACTA	
    160179	    35	  97.1	    28	..................A................	TCCTCACAATGTAAAGTATATAATGCTG	
    160116	    35	 100.0	     0	...................................	|                           	
==========	======	======	======	===================================	============================	==================
        11	    35	  95.6	    28	TATTCTTACTTACATCTAGGGTTGTTAGTTGATTA	                            	       

# Left flank :   TTAATTTTAAAGTTTCTACTGCATACTCTGTCTTTACTGTTTCTTTACTATTTGTCTCTAAACTTTCTGTAACTTTAGTAAGATTTACTGCAATACTTTTTAAAGAATCAAATATCTGTTCAAAATGAATTCTATTTTCTGAGTTGTTAGTTATTATTAAAGCCACATTATTATTAGTCACTTTGCTACCCTCTTTCAATTCCTCATAACCTTTTTCTAGATAGTCGATTCTCTGTTGATTTATACATGTGTTGCACTCGCCTTCCATATCATCACTTCCCCTCTACTTTATTTTTTTGCATTGAAAAAGACACCCTCTCAGGTGTCCTAATTTTATGAATTTATTTTTTATTTTTTAATTGTTACAACTAAGCTATCTGTAGTAGTTGTATCTGTTGTATCTATATATTGAGTTGCATAATCCGAAATTGCCCATGTATTTTTAATGGAATAGAGAGTTTTTAATTGATTTTTAAAACAACTTAAATTAACTAATACTA
# Right flank :  CCCTTACAATCTAAATCAGTTAATGCTATAAAATACTCAATCCCACTTAAATTACTTATATTCTTGTAAGATATTCTTAACTCTTTTATGTTTTTTACATCTAAATAAAGTATTGGTTCTGGACTAGTTTTTCCTATCAGAGTATACACCGCATTTCTAAAATTTTCATCAGTAAATTTACTTGTAATATCTGTGTTATCACTAATGTCACTAGCACTTGAAATAGTCAATGTAGCTGACACATTTATATTATTTGTATTCACTACGCCATCAACCATTGTTAATTTACCTATAAATGTGTAAGTTCCTGCTACTGTTGTACTTGCTACCTTGTCCCATGTTACAGCTAAATTCTTAGTTGTTCCATCATATAATGTAGTTGTCACTGTTGTAGGTAATGTATAAATATCCCCTACATTTTTTGTAACGTTTATAGCACTTACATTAGCTACTGTTGGAATAGTTATAACTTTTTTTGGTACTGTAAAGGCTATTGAATT

# Questionable array : NO	 Score: 2.63
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.61,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TATTCTTACTTACATCTAGGGTTGTTAGTTGATTA
# Alternate repeat :   TATTCTTACTTACATCTAAGGTTGTTAGTTGATTA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:71.43%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-2.00,-2.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [11-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [73.3-83.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,1.05   Confidence: HIGH] 

# Array family : NA
//