Array 1 44027-37726 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNUL010000010.1 Lactobacillus delbrueckii subsp. sunkii strain CIP 101810 CIP101810-i1-1_scf10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =============================================================================== ================== 44026 28 100.0 33 ............................ CTCGGAAGCGCTTGATCGTCAAGCGTTCTTTAC 43965 28 100.0 33 ............................ CTTACCACCCAGGCCATAGGCAAGGGTCTTGGT 43904 28 100.0 33 ............................ TTTCTTTTTCCCGGTCCCGGATCAAGCCTTTCA 43843 28 100.0 33 ............................ TCAAATAGGCGTATTTTCTCGCAGTAATTGCCA 43782 28 100.0 33 ............................ TTTTTGTTGATAACGCCCTGCTTAAGCAAGGCG 43721 28 100.0 33 ............................ TATAAAAGCATAACTTCCCCACGCAAGTGGGGG 43660 28 100.0 33 ............................ TAGCCGCCGTATTAGCCGCTCTGCCACCGTCAA 43599 28 100.0 33 ............................ CCATGGCCGCAGTCTCCACCGCTGACTTTGGCT 43538 28 100.0 33 ............................ CCGTGCCTGTTTCATCATCCACCGCAAGGAAGT 43477 28 100.0 33 ............................ CATTGGTTTCTTGCCGAACGTCGACATCAAAGC 43416 28 100.0 33 ............................ TAAAGTAAGACCAGGTGCTTACGTCAACGTCGT 43355 28 100.0 33 ............................ ATTTAGTTGCGGGGAATATCACAGCCACCAAGA 43294 28 100.0 33 ............................ TAACGACGGTGGAAAACAATATCATGGTCGGCT 43233 28 100.0 33 ............................ TAGTTAAAGCCTTAATTTGCTCAACTAAAACAT 43172 28 100.0 34 ............................ TTGTGCAAGGCTGTTGTCGTCGGCACAGAAGAAG 43110 28 100.0 33 ............................ TCATTCGAACATCGCCCGGAAAGCATAGAGAGC 43049 28 100.0 33 ............................ CAGGAAACCGAGTGGAGAAAGCACCACTTCACT 42988 28 100.0 34 ............................ TATCCTTTAAGTCACAAGCTGAGCTTTACCAAGC 42926 28 100.0 33 ............................ TCTGGCCACCTAATCCAGAGATCATCATAGATA 42865 28 100.0 33 ............................ GGCTTCTTAGAAGTAAGCATCCCTTGCATGTGA 42804 28 100.0 33 ............................ TTGTAAAACTGACTGAAGGCACTGGATACTTCA 42743 28 100.0 33 ............................ CTCTGCTCGGCTGGAAGCACTCTGCTTGACCAG 42682 28 100.0 33 ............................ GAAGCCATGGCGGAAAGCAAGAAGTCAGTAGAA 42621 28 100.0 33 ............................ TCACTGATCGGTCTCCCTGCCCGGTTGAGCAGT 42560 28 100.0 33 ............................ CGTGTCTGGGGAGAATACCACAGAGAACTGCCT 42499 28 100.0 33 ............................ CGTCAGACAAAGCTTCCTGCCATTCGGTTACGA 42438 28 100.0 33 ............................ TCGAATACGAAACTGTTAAATGTGGAGATACTT 42377 28 100.0 33 ............................ TCAGCTTCATGTACTGCATAGGTAGCAAGCTGG 42316 28 100.0 33 ............................ CTTCGGGTCATCTGTCAGCCAGGCTAAAAAGGA 42255 28 100.0 33 ............................ TGGTCCAGTAGTCCATCAGGTATAAGCCGTCAA 42194 28 100.0 34 ............................ TCATCATGAGAGACGCACGCCGCTGGCTCGTTGA 42132 28 100.0 33 ............................ CGCCGTGGAAGTCGGTAGCCGTAGCCTTTGGCT 42071 28 100.0 33 ............................ TACTTTGCTCAAGCATTAAAGATGGCTTGGGCA 42010 28 100.0 33 ............................ GCGCCGTGTGGAGGCACTGACTGGAGATGCTGA 41949 28 100.0 33 ............................ TCATGTAGGGATGTGGCAGTATGCTGACAACTG 41888 28 100.0 33 ............................ CTGTCTTGATAGCTGGACACGTCCATGCCCAAG 41827 28 100.0 33 ............................ AGCATCGCTGCCGTCCTCTGCGGTATTGACCAC 41766 28 100.0 33 ............................ TGCTTAGACTAAATTGCAAGCCTTGACCTATCA 41705 28 100.0 33 ............................ TACAAATGAATAAAGAAGAATTTAAGAATCAGA 41644 28 100.0 33 ............................ TCGCTAGAGAAGGCCAAAAGGAATTTGGCGGCA 41583 28 100.0 33 ............................ TTATAAAGTCGCGTCAGCTCGTCAGCAGGCAGT 41522 28 100.0 33 ............................ CAGGAGTTACTTTTTCTGGTGGTCAGTTGGCAG 41461 28 100.0 33 ............................ TCTGGTGGGCATACTCCAAAGTCAAATCAATCA 41400 28 100.0 33 ............................ CTCCAGAGTCTTCCCCATGCGCTGAAGCAGACC 41339 28 100.0 33 ............................ CTTGACCTTAAACGGAACCAATTTCATTTCTAC 41278 28 100.0 33 ............................ CAAGACTTATACTGTAACGCTCTCAGACGGGAG 41217 28 100.0 33 ............................ CCGTGTCATTATAAGATGCCATTTAATCACCTC 41156 28 100.0 33 ............................ TGCCATTCATTAGGCACTGTTTGCAAGCTTGGC 41095 28 100.0 33 ............................ TTCGCTCTGCTTCCTGCCGACTGATCTCGTCGT 41034 28 100.0 33 ............................ TACCAGCAATCACTGGAAATGGGGGATTAGATG 40973 28 100.0 33 ............................ CCAGGCTGATGGAATTGATGATGGATGCACACA 40912 28 100.0 33 ............................ TAGCTGGAGACATGATCCTGCAGAAAATGACTC 40851 28 100.0 33 ............................ CGTCAGACAAAGCTTCCTGCCATTCGGTTACGA 40790 28 100.0 33 ............................ TCGAATACGAAACTGTTAAATGTGGAGATACTT 40729 28 100.0 33 ............................ TCAGCTTCATGTACTGCATAGGTAGCAAGCTGG 40668 28 100.0 33 ............................ TCATAACAGGAGTCACGCCCTTGATGCCGAGCC 40607 28 100.0 33 ............................ CATCAACGCCATAAGTTCTAGCCATTATTCTTC 40546 28 100.0 33 ............................ TCGTGCTTGAGATATCTATCAACCCGCTCTGCT 40485 28 100.0 33 ............................ TTAGGATTTGATTAAGACCGATACTCTTTTGGG 40424 28 100.0 33 ............................ TTAAACCAGTCTGTTAAGTTCATTTTTTATCTT 40363 28 100.0 79 ............................ TTGCTATTGTACTGTCACATACTCAGCCGGAATGTATTGGTGATCCCAACCAAACAACGATTAACTGGAGCCTAACGGG 40256 28 100.0 33 ............................ TGCCAGAACAGAGACCGAAGTGCCCTGGCTAAG 40195 28 100.0 33 ............................ AACATTGACGGCATCAAAGATGGCACAGCTGTT 40134 28 100.0 33 ............................ TCTTCATATTGGCACTCAGAATCACCAGCTTGA 40073 28 100.0 33 ............................ CTACCTCTATGCCAGCTCAACCAATCTGTTGGG 40012 28 100.0 33 ............................ TACTCTGTCAATCGAATATGATACTTTAAAATG 39951 28 100.0 33 ............................ CCATTGTCAAATCCGTGCTTGAAGCTGGAAACG 39890 28 100.0 33 ............................ TACTAATCCAGAAGAGTCAACCTAGCGCTGGCT 39829 28 100.0 34 ............................ TCAAGCCAGAGCCGTCATTAAGCAGTTTTGGAGA 39767 28 100.0 33 ............................ CCGGTCTTGGCCAATTTCTTGGCGTCAGTAGGG 39706 28 100.0 33 ............................ TCAAGGAGTTGGTTGCCTTGTTGATCCCGGCAT 39645 28 100.0 33 ............................ AATAAAAATGACAAAATTAGAAGAAGAAACCAC 39584 28 100.0 33 ............................ CAATCCCCGGATTAACATGCCAGCCGATGAGGT 39523 28 100.0 33 ............................ TTGGAGCGCAAGCTGGTCTGGCTGCTGGGTGCG 39462 28 100.0 33 ............................ TAGGAGATTATAAATGATTGTTTTAGATTCAAA 39401 28 100.0 33 ............................ TGAGTAGCTAGTACCAGAACCTTGCCAATATGG 39340 28 100.0 33 ............................ TGTTTACGCCAACTAAGCGGCCACTTTCGGGCT 39279 28 96.4 33 ...................A........ TTTCACACGTCTTTTTTTGTTCCCAGATTATTG 39218 28 100.0 33 ............................ CGACTTGACTAGAGCGATCATGCGCTACCTGGG 39157 28 100.0 33 ............................ CTTGTGTAATCTTCATTTAGTTTGCCCCCTTAA 39096 28 100.0 33 ............................ CAAGGGCTTTACCTGGCTACAGACCAGGTATAG 39035 28 100.0 33 ............................ TGTTGGAGCTAACGAAATCAGCTGGGACGGCAA 38974 28 100.0 34 ............................ TATGCAAAGTTTTACGATTAGCCTTAGTTGGGGA 38912 28 100.0 33 ............................ CCAGTGACGTCGCCTTTAGCATTTATCGCATTG 38851 28 100.0 33 ............................ CTAAGTTCGCTTTCAAGGCGCTATTATAGTAAT 38790 28 100.0 33 ............................ CAGTTGCATAAGAAAGGGATTACGGACATCACC 38729 28 100.0 33 ............................ CGACTGACAACGGCGCTTGCGTGTCGTCTTCGT 38668 28 100.0 33 ............................ CGGTTGCATAAGAAAGGGATTACGGACATCACC 38607 28 100.0 33 ............................ CGACTGACAACGGCGCTTGCGTGTCGTCTTCGT 38546 28 100.0 33 ............................ CGGTTGAAGCCCTTCTTTTCCAGGGCTTCGATA 38485 28 100.0 33 ............................ CTGCGGTAACTTTGCGGATTAAGTTCGCTTTCA 38424 28 100.0 33 ............................ CTTTGCCCACGTTTATCGTGAAGACTACCAGTC 38363 28 100.0 33 ............................ TGTAGGATTAAGCACTTGATCGCACAAGGATCG 38302 28 100.0 33 ............................ TTACACATTTACGATTATAGCGAAACAGTTGAA 38241 28 100.0 33 ............................ TCAAGGGTCTAGCAAGATTTTTTATTAATCATA 38180 28 100.0 33 ............................ CACGAAAAAGTCTTTCGATGATGACAAAAAAGA 38119 28 100.0 33 ............................ TTGTAATATTTTCAGTAATCGGTTATATTGCCG 38058 28 100.0 33 ............................ TTGACAGTGAAAAGATGGAAGCCTATAACGGCA 37997 28 96.4 33 ..........T................. CAATCATACAGTATATAAAGGCAGTCAGCATTC 37936 28 100.0 33 ............................ CGTCGACTGCGTGATCATGGTCCGGCCAACTAT 37875 28 100.0 33 ............................ TAACAGTTTTTGGCGCTAAGTCTTTATAATCAA 37814 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 37753 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ =============================================================================== ================== 103 28 99.8 34 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTACCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTGGATAAGGAAGGCGTTTCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACAAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : GTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGGTACTAGGGAAGGAGTGAGGAACAAGCGTGAGCATTTACGGAAAGTATGCCGACTATCTTCCACAGATTCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAGGAGAAGAAAGCATGACGCAAAAGTGCGAGAGAAAAGGTATGCCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGCTCATAC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //