Array 1 161810-159400 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB900100.1 Thioalkalivibrio sp. AL5 F574DRAFT_scaffold00004.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 161809 29 100.0 32 ............................. TACTCTGGCACCGTGACAACCCGAGCAATCCG 161748 29 100.0 32 ............................. ACGCGGACGACGAAAACCGCGTGCACTACCTG 161687 29 96.6 33 ............................T GGTGGAATACGGCACCGATGTGCTGGCCGGAGC 161625 29 100.0 32 ............................. GCACGGGACTACTCAGAGGTTGCGGACCAGAT 161564 29 100.0 32 ............................. TAGTCGTCTCGTCGAAGCGCGGATGCTCTGGC 161503 29 100.0 32 ............................. TACCTAGAGGTACAGAGAGAGTTGAGGTATTG 161442 29 100.0 32 ............................. TCCGTGATGCGATCCAGCGGAAGCCCGTCGAC 161381 29 100.0 32 ............................. GCGTCGTTTCCGGCCCCTCGATCACCGAGAGC 161320 29 100.0 32 ............................. AACGACCGCACCGCGCGCGTCGCTGTGCTCGA 161259 29 100.0 32 ............................. GCGTTCGAGCTGGCAGTCTCGCTGGTGCAGGT 161198 29 100.0 32 ............................. CCACAATATGCGCTCTAGGTTGGCTTTATGGT 161137 29 96.6 33 ............................T GTTTGGAAGAGAATTGCCCCGGCTCCACTTCTT 161075 29 100.0 32 ............................. CTACAGCAGGTAGCGCGTTTACATCGTCAATC 161014 29 100.0 32 ............................. GGAACGGTCGATCTAACGATCCCGGCGCATGT 160953 29 100.0 32 ............................. GTCTGGCACATCGTCCCAAGATTCCAGAATAG 160892 29 100.0 32 ............................. GGTGGATGAAAACTTAGGAGGCTGGGCACCAT 160831 29 100.0 32 ............................. GATTCGTGCGGGCGGTCCATGACCAGAGCAAC 160770 29 100.0 32 ............................. CGGTGCAGGGCGCCCGCGATGCCGAGGAAGCG 160709 29 100.0 32 ............................. GGCGGACGGGGGTTCCGAATGAGCAGCATCCA 160648 29 100.0 32 ............................. GTTATAAGGATGATGCTGAGGCTGCAAGAGAC 160587 29 100.0 32 ............................. GTGTGAGCAACAGCTACACGGTCTACGTCCTG 160526 29 100.0 32 ............................. GTAAAGGATGAACGTTTTGAGGTTGAGGCATC 160465 29 100.0 32 ............................. AACGTTCCCGCGTCTGAGCCTGTCAGGCTGTC 160404 29 100.0 32 ............................. GGAAGGCAGCGAGACAAGCCTAGAGATTGAAA 160343 29 100.0 32 ............................. GTTTAGGTCATTGTCCTGTAGTTCGTGTTCCT 160282 29 100.0 32 ............................. CACTTAGGCGACACGTTCGCCGGGTGCTGTCC 160221 29 100.0 32 ............................. ACCTGTCCGGTGGCGAAGACAAGGCCGAAGCG 160160 29 100.0 32 ............................. TGGGAGAGGAAGCTGGACGGGTTCCCGCCCGG 160099 29 100.0 32 ............................. CTCGAGGGCGTTGGAACGGGCACGGTCGATTA 160038 29 100.0 32 ............................. TGCGGCGATCGGCAGAAGCCCGATGGGAAGGC 159977 29 100.0 32 ............................. TCGGCGTGGTTTCGATCGATGACTGGTCCCAG 159916 29 100.0 32 ............................. AAGCCGCCCGGCCCGTCCTCGCCTTCATAGAA 159855 29 100.0 32 ............................. TTCGCGCGGATGGTTTCGTTACGCGCCTTGGT 159794 29 100.0 32 ............................. GTTGAGAAGCACGCCGACTTTCGGGTGATCGC 159733 29 100.0 32 ............................. ACGGCCTCGAAATGCTGACGGGAGTGTAATCG 159672 29 100.0 32 ............................. TACCAGACCACGGTCCCGTCCGTCAGCGAGTA 159611 29 96.6 32 ........A.................... CCCACTTCTGTGGCGGCTTCGTGGATGATGCC 159550 29 100.0 32 ............................. GCTTGGGCCTTCGCCGGCATCCCCGACGCGGC 159489 29 96.6 32 .................A........... GAGACTACGATGCTTTTCTATCTGCTGCTGTT 159428 29 96.6 0 A............................ | ========== ====== ====== ====== ============================= ================================= ================== 40 29 99.6 32 GCGTTCCCCGCACCCGCGGGGATGAACCG # Left flank : CCGCCTCCGCCAGCACCGGAAGCGCAACCACCCGCGATCCCGGAGGCCGAACACCTGGGCGACGCCGGCCACAGGAGCAGATGACCATGACGATGCTGGTCGTCGTAACCGAGAACGTACCACCCAGACTGCGCGGCCGCCTCGCTATCTGGCTCCTGGAAATCCGCGCCGGAGTCTACGTCGGCGACGTAAACCGCCGCGTACGCGAAATGATCTGGGAACAGATCAACGCCTTGGTCGACGAAGGGAATGTGGTCATGGCATGGGCCAGCCGCCACGAATCCGGCTTCGAATTCCAGACATGCGGAAAAAACCGCCGTATACCAGTCGATTACGAAGGACTACGGTTGGTGCGCTTTGCACCCGAACCTGACCATGAAACATAACCCGCGGAAAATGCGGCACTCTTTAACAACTAGCAACCACTTGATTCCGCCGGCTGAGCTGGTGGATCATTCAGCCGCCAAAACCTTCCCGTAGATCAACAAAATACAGGAAGA # Right flank : CGCTCGTAGATGTGGGGCGACATGAAGGGACATCACTTCGTCAGCAACACTTATTTCAGTGAAAGCCATTTTCGTTTAGTACTTTAGAGTTAATACGAAACGACATCCGTCCCTCGTGTACCCAGTTCTGTACCACCGCGGCGCGGTGTGCACCCGCTTCATTCTGGGTATCGGCTCCAACTCCCGGGTCGATTGATGCATGATCGGTGCGACGACACGTCGCCGGCGAAGGAGCATTACGCATTGCCCTCGTCGGGGAAGTCCTGGTCGCGCTACTCCCGAGCTCCAGAAAGCGGAAGCCCGGCGCGGGACTGGGCTTGCGCGGTTTCATCGGTTCCTGGTCTCGGCGGTCCTGCGTCGCCATCTCGCGCCGCAAGGGTTCTAGCTCGGAGGGCATCAGCCGACGGGACGCGGACCCGGGCGAGGAATCGGGCTCCCGACTCCTTGAGCCGGTTGATCGGGTGCCTCCCCACCACTCTGAGGGTTCTTGGCCATCGCGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCACCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //