Array 1 1335025-1332956 **** Predicted by CRISPRDetect 2.4 *** >NZ_UHHS01000001.1 Streptococcus viridans strain NCTC1080, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1335024 36 100.0 30 .................................... GGTCGTCTAGTAGCTTGATAGCCATGACTT 1334958 36 100.0 30 .................................... GTCAGGCATTAGCATATCGCCAAAAGGATA 1334892 36 100.0 30 .................................... TTGGGGCACGTAGAGTTTTGTTGCGATTTT 1334826 36 100.0 30 .................................... AAGCTATCGGAAAAGAGTGGAACAAGCATT 1334760 36 100.0 30 .................................... AATCCGAGAAGAGATTAGTAAGATTTCTGT 1334694 36 100.0 30 .................................... AGACATTCTTTATTGTCTCGTTCTATTGCT 1334628 36 100.0 29 .................................... GTCACATTGGTCGATATTGGCGATTTGAT 1334563 36 100.0 30 .................................... CCTCGCCTATCGCATTCTTGATTGAGTGTT 1334497 36 100.0 30 .................................... CTCAACTCAACTCTTCTATTCTGTCGTTGC 1334431 36 100.0 30 .................................... TGATTTGGAAATCTTAGCAAAAATAGAAAG 1334365 36 100.0 30 .................................... AGGTAGTGGAGATAAGTTTACTGTATCTAA 1334299 36 100.0 30 .................................... ATGATAAAAAACGTAGTCGATTTAAAGATT 1334233 36 100.0 30 .................................... AAGATAAAGAACTAAAAAAAGCTATGAATT 1334167 36 100.0 30 .................................... TTACACGAATATCTACAGATGGCGTTTTTA 1334101 36 100.0 30 .................................... CGCGCTTTTTTGATATAATCATCTCAAAGG 1334035 36 100.0 30 .................................... TATCCAGATGGTACGACTGTAGAATTTAGC 1333969 36 100.0 30 .................................... TCCGCGCTGTTCTAAGAATCGAATTTGTTT 1333903 36 100.0 25 .................................... ATTCCGTTTCCTAAGCTAATAGTGA 1333842 36 100.0 26 .................................... TAAATGCTGTGATATTCAGTATCTTG 1333780 36 97.2 29 T................................... TAGTTAGAAAGGTTAACGTGTTATTGTTT 1333715 36 100.0 30 .................................... CTATTATCAATTTCCGAGAGCAGATAGCCT 1333649 36 100.0 28 .................................... TCACGAAACAACCTGCAGACAAATAGAA 1333585 36 100.0 30 .................................... AGCACGACCGCATGGAACGACAACGGAAAT 1333519 36 100.0 30 .................................... TAACAGCTGCAACCATCAAAGAAGATAAGC 1333453 36 100.0 30 .................................... ATCTTATTTGCTAGATTCCATTTACTACCT 1333387 36 100.0 30 .................................... CACAAGGTAGCTTAAAACGTAGGCATTGGT 1333321 36 100.0 30 .................................... ATGAAATGTATTATGAATTTTATTGAGCAT 1333255 36 100.0 30 .................................... GACTGCGATTGAGATGCTTGTTCTAGCTGT 1333189 36 100.0 30 .................................... AATACTCGGTTTGCGCGTGGGGAATACATA 1333123 36 100.0 30 .................................... ACAAGCGATTGAATCGATTCTCTTAATTTA 1333057 36 100.0 30 .................................... TGCCGGCCAACTTTACAAATACAGTTAATG 1332991 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 32 36 99.9 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGCCCGAAGTGAAATCTATGTTAGAAAAATTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATATGTCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGGTATAATATTAACAAATATAAGGAATCGTTCGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : ACAATACATTTTAATCATAGGGCTTGCAAATTTTTCCAATCGTGTTATAATACTTTTTAGAGACATATCACCTACAGGAAATCTTTCAGAGAGCGTGTGGAGCTGGGAATCACGCAGAGGATGTAGCTGGGACTACTCGATTTATTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTAGGATTGCCGCTTTTTATTTTGTCGGAAGGAGGAAGAGTTATGCTCTATATGATTGGTGGATCGCCTTGCAGTGGGAAGTCAACAATTGCCTCCCTTCTTACTCAGCAGTATGGGCTGCTTCATATCAAGTTAGATGATTTGACAGACCAGATGATGGATCAAGCAAGAGCGAACGCAAAGCCGATTTCCCTTCTGAGACAGGACAGAAGTCCGGATCAAATCTGGCTGAGACATCCAGAGGAGATGGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //