Array 1 104469-104179 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPND01000013.1 Saliphagus sp. LR7 scaffold13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 104468 30 96.7 36 ..............T............... CTTGTCTTTGGGTTGTTGACACTGATCCTCATCCTC 104402 30 100.0 34 .............................. GTTGGTACCTGGGGGCTAGTGCCTGCTCCCGACG 104338 30 100.0 35 .............................. ATCGAGTTCGCGTTCAACGCCGTTGGCGGGCCGGG 104273 30 100.0 35 .............................. TTAGGAAGTATGAGTGCAGTCCTCGACTACCTAGG 104208 30 83.3 0 ...............C..........GCTG | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 96.0 35 GTTCCAGACACACCCATGAGGTCTTGCAAC # Left flank : GCCTCGAAGACGAGACAGTAATGGATCAGATGGAACAGCAGTTCGCTGAAGGCAAATCAACGTACACGCTGTCGCTCGGACTCAGCGAACATCTCGCGACGTACGAGTACATCGGCCGGTTCGACGTAAGTGAGCACACGGGACGAGCGTCGGTTCGATCAGCAGTTCCCGGCGAGGAAATCGACCTGATTCCCTCGCCAGAGGCCAGATACGTGACCGAGCGGTCGCCAGCGTTCATGACAACGCGCGAAGCGGGTGGCCGGAAAGCAGATGGGTGGCAAACGCTCACGTACGAGAGAAGCGGGGACCCCCTCGACCTCCGCGAAACATCGTACGCTGTGGTCAACGGCAATGCAATCACCTTCTCTTAATATCCTCTCGCGCCGAAATCTCCTAATTCGTTCCCATCGACCTCCAGTGGAAGCACAGGATTGGCGGTCGACGGATATCGACCGCCGAAAACCCCAATCTATAGGCTTCTAGAGTGCTTATCGCCGACC # Right flank : TGTCACAAAGCCCTCTAGACATTACTCTCCACGTCAGAAGCATGCTTCAGCCGAGCGCCTATTACGCTGTTTAAACGCCGTACACCCGATGCACACGATCTTGAAGGAGTAAGAGGACGGATACCAGTCGCTACAACACGAAACTCTGGACCGCTTTGCGACGCGATCAAGATCTTCGCACCGAGGTGGAAAAGCCTCAGTCAGACGCGCGACTGACGTATTAGTAGGTCTGGACGTCGAGCCCGTCGATCCGTTCAAAGTGGTCGTCGCGTGTGACCACGGTCCCGCCGGCTTCGCGGACGGCGCCGGCGATCATGATGTCCGCGAGATTAATCTCTTGGCCGGCGGCGACGAGCTCCCCGTCGACGAGCGCCGCCTCTCGAGCGGCGGTGGGGGTGAGCGGTAGATGATTGGCCCACCCGAGTTGATCGACGAGGTCGGCCACGCCGGCGGGTCCCCGGAGCCGGGCGCCGCCACGGAGGACCTCGAAGAACGCGACT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAGACACACCCATGAGGTCTTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.40,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 103303-110449 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPND01000012.1 Saliphagus sp. LR7 scaffold12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================================================================ ================== 103303 30 100.0 36 .............................. CTCTAGATCTAGCTGACGAGCAGATCGGCGAGGCGA 103369 30 100.0 36 .............................. CCGACGGGACGCCCGCTAGAGTGAAACTCATAGGTG 103435 30 100.0 36 .............................. CACCCCTGGGGGTGAAACCGGAACCGTCGATAGAGG 103501 30 100.0 36 .............................. GCCTTCCCTCACGCCAAGGATGTTGCACAAGGGACG 103567 30 100.0 35 .............................. GTTGTGGGACATGATGGATCAGGGAGAGTACCAGG 103632 30 100.0 36 .............................. TGCTCATGGTTAGGTTGGGTTTGGATTATGAAAACG 103698 30 100.0 36 .............................. ACCTCGAACATGATCATCCTGAAAAACAAGACGCTG 103764 30 100.0 44 .............................. ACCTCAGCGGGGACGTGCGCCGGCTCCATTTCGGTGTGCGCCGG 103838 30 100.0 36 .............................. GCTTGATCGGCCAGCACATCGCGGGGTCGGCGGGCG 103904 30 100.0 35 .............................. TGCGAATCGGCCTGTTGTGAGACTGGAAGTAACGT 103969 30 100.0 36 .............................. TGGCGGACCGTCTCGGGCGTCCGCTCCCAGAGATCG 104035 30 100.0 34 .............................. GCTTCGTGGCGGGTCGTCGGAAGACACGGGGTCG 104099 30 100.0 35 .............................. CCGGCCAGTATCTCGCTGGCGATACACCAGTAGTG 104164 30 100.0 36 .............................. GTCTCGCTCGCGTTAAAACACGTCGGTCCTGTCAAC 104230 30 100.0 36 .............................. TCCTCGTCCTCGAGCTCATCGACGATGTCGATCGGA 104296 30 100.0 35 .............................. GAGTACCGCGACGAGGCCTACAGCACTGACGCCGG 104361 30 100.0 36 .............................. GAAACTGGCGGTGCGAACTACAATAGCATCTATATC 104427 30 100.0 36 .............................. CTGTGCTTCGCTCTCGTAGTACGACCGACGAATGAC 104493 30 100.0 36 .............................. CAGAAGCAAGAGCATATCGTTAGCTTCTGAGGAACG 104559 30 100.0 35 .............................. CCCATGAGGATCGACATCGGGACGTCAAGATACGT 104624 30 100.0 36 .............................. AGGTTCCGAGTGGTCCACAACCTCCGGCTCTAAGGT 104690 30 100.0 36 .............................. CTGCATTCGGGGCAGGTCACATAGGCCTCGCCCATT 104756 30 100.0 35 .............................. TACTTCCCAACCCTCAAGCCGTGGCTATCTGATTC 104821 30 100.0 35 .............................. CTTCGCTACCAGTAGCGCCTCGATCACGTCGTCTA 104886 30 100.0 34 .............................. GACGACAACGGCGGGATCGGTCACGACTACCTCG 104950 30 100.0 37 .............................. TCCTCTAGTTCGGACACGTCCCACGAGTTTGTGGCAC 105017 30 100.0 36 .............................. TGGCGAGCTGCTTACCAGGGCTTAGTCGTCTCCCCA 105083 30 100.0 36 .............................. TGGCGAGCTGCTTACCAGGGCTTAGTCGTCTCCCCA 105149 30 100.0 36 .............................. GGTTGGCGACTACTTCTCGTCTAATGTCCTGCGACA 105215 30 100.0 37 .............................. GGAGTTACGTCATCGTCGTTTCGGCGGATGGTCACGG 105282 30 100.0 36 .............................. CTGGCTTCTGGCGGGGTTGTGACTGGCCCGACATCG 105348 30 100.0 36 .............................. AAAGCAATCGCCTCGAAGGGGAATCATGTGTGGTCG 105414 30 100.0 36 .............................. GCCGACAAGACCGCCCCATCGCTCGGGTTCGTTGTT 105480 30 100.0 112 .............................. GGCCGTGAACTTCCCCACTGGGGCCTGGTCGTTGATCGGCCCTACGTCCTCTAAGACGAGTTCCGAACCCCCGACCTCTTTGAAGATCCAGAAAAAACCTCCGTGAGGATAC 105622 30 100.0 37 .............................. GATTATTGCCGGATTACTTACAACCATCTGGCTTATG 105689 30 100.0 36 .............................. TGACACGGGCCATTGGCGGCGTCGTGTCCACAAATC 105755 30 100.0 36 .............................. CGTGCTCGAATTGCGAACAGGAAGCGCCCGATCCGG 105821 30 100.0 36 .............................. CCGATCAAGAGAACGCCCGCACTCGGGAGTCGGGTA 105887 30 100.0 35 .............................. GTCCCGGTATCCGAAGGGGAGTTAGAACACTTTGC 105952 30 100.0 36 .............................. GCCGCGAGGCGACAGACCACGTCCCAGGCGTCCTCG 106018 30 100.0 37 .............................. CCGTTGCGCGGCCAGGATCATCCCCCTCCAGGTGAGG 106085 30 100.0 35 .............................. CACTACGATACCGCCTAATCCATGACTCAGAAAGT 106150 30 100.0 37 .............................. CTCCGCGAAGGGGCTGATACAACCTTGACTGGCAACG 106217 30 100.0 36 .............................. TTCGGGAAGTCGGACTGTGATTTGCTCCATGTCGCC 106283 30 100.0 35 .............................. AAAATCGGCTCCTTTGTCCGAATCCACATCATCTA 106348 30 100.0 35 .............................. TTGATGATGCGGAGTCCGTGGACGGACGTCGCAGA 106413 30 100.0 37 .............................. TGGAGCTTGAGCTTTGTGCCGACCGTGACGGCCTCGC 106480 30 100.0 36 .............................. GCGACAATCGTGATCTCCCCCGAGTCCATATCAGCC 106546 30 100.0 37 .............................. GGCCACGAACGGACGTCGGCGACTAAGTGGATGTCGA 106613 30 100.0 35 .............................. AGATGAAGCGATTCCAGGGCAGAAAGGCTGAAATC 106678 30 100.0 36 .............................. TGGAGTCGGGGCGTCTCGCTGACCTCCCGGCGCGAC 106744 30 100.0 36 .............................. GATGGACACCGTCTCGCTGTGGGACGGCTGGCTCCC 106810 30 100.0 35 .............................. GACCATCATCACGCCAAGGGGATCGTCCTCAACAC 106875 30 100.0 36 .............................. GAGGAGTTTGACCCGGCCACGGTACTCTTGAATCCG 106941 30 100.0 36 .............................. GACGTATCTGACTGCTCCAGAATCAGGCGGGTCCGG 107007 30 100.0 41 .............................. ATCCAGATCTCCGCGGAGAGCAACCCGGAGGAGTTCGCCGA 107078 30 100.0 37 .............................. TCAACGGCAAACACACACCCAGCGTGAGTCACATCAA 107145 30 100.0 36 .............................. GGTCGTCATGGGTTGGGTATGGATTTGCGCTTGGGA 107211 30 100.0 36 .............................. GAGCGCCTGCCTTAGTGGCCCGACTCCACGCGCAGG 107277 30 100.0 36 .............................. TCGCAGGAATCAGGGTGCCAGCTAGCCTCGCCGGCC 107343 30 100.0 35 .............................. CCGGATTCGGTGTCCCCGAGGACGAACAGCAGATT 107408 30 100.0 36 .............................. CGACCGCGACGCCCACCACGACGGTCAGGCCAACCT 107474 30 100.0 36 .............................. GTCTTGCCCAGTTCGTTCCTGAGTTCGTCGCGGCGG 107540 30 100.0 35 .............................. TGATGGATACCGACCCCACCGGGAGACGTCATACA 107605 30 100.0 35 .............................. GCTAATCACATTTACAATCCAGGGGGGAGCAACCG 107670 30 100.0 36 .............................. ATCATCGGACTCAACAAGGTCCTCGTCGATATCGGC 107736 30 100.0 36 .............................. CTCTCGAACCCGGGAGAGGAACTCGGTGATCGCCTC 107802 30 100.0 36 .............................. TGATCACCGTTCTGGGCCATCCAGTTCCTAAGTGTT 107868 30 100.0 36 .............................. ATCCCCTCGCCGCTGGGCCGATTCCAGCCAGGGACC 107934 30 100.0 37 .............................. TCGACGTAGAACTCGAGCTCGGTGATCAGGTCGGGGA 108001 30 100.0 35 .............................. CTCCGAGCGACCGCCGAGGAGTGCGTGCTCATCGA 108066 30 100.0 34 .............................. GGGGCTAATCAAATTACGTATGACGCTCGCCCTT 108130 30 100.0 36 .............................. CGGGAACGCCCCGGACTTGGACGGTGTTGAACTCCT 108196 30 100.0 36 .............................. CTCCTTCGACGTGTCCGTGACCTTCCAGACAGCTCC 108262 30 100.0 33 .............................. TTCATGCTCCCACTGCCCCCCGACTCACGCCGG 108325 30 100.0 36 .............................. TATCTGGTGGATGATCTGATCGATACCGGGAAGAAC 108391 30 100.0 36 .............................. CTGATGGGGCTCGTGGTCGAAAAACAGGCGTATGAC 108457 30 100.0 35 .............................. CGGTGTCGATTCCGACGGCGACGACGAACTAACTA 108522 30 100.0 38 .............................. TACCGCTTTGTCGTTGAACGCTACGAAGCGTTCCCCGC 108590 30 100.0 37 .............................. GTCCCCGACGAAGCGTGGGCCGAAAGCGCGCCCGAGT 108657 30 100.0 36 .............................. GGCATCCTAGAGTACCTCCTCGATGGCCGGAATGTG 108723 30 100.0 36 .............................. GCACGTCGTGGTTGTTGACCCAGGACTTGATCTCGT 108789 30 100.0 36 .............................. TCCATCAATTTCCACAAACTCAGAGCAAGCTCGCTT 108855 30 100.0 35 .............................. CTTCCAGACGTATCCGACGATGTTTTCGAGAACGA 108920 30 100.0 37 .............................. TACCAACCGGTCTATGAGATAATCCCGCTCGGGAGTA 108987 30 100.0 32 .............................. CACCCGGGCTTCGACCGGCCGTAGCTCAACCG 109049 30 100.0 35 .............................. CTCTAGTATCTTAGCGTATGACCCGAACCCGTGTG 109114 30 100.0 35 .............................. GAGCCTATCGGCCACGGCGAGTACGAGCGCATCGA 109179 30 100.0 36 .............................. GTAGGTGGTGGCGTTGACACGGAAGGCATCCCTATC 109245 30 100.0 35 .............................. CTGAGCGTCGAGCAAGCCGATCGAGACGTCGACTC 109310 30 100.0 36 .............................. GAGTGGACCGGCGGGAGGTGGGCGGCCTTCCCCGAG 109376 30 100.0 36 .............................. CATAAACCCGGACACGAACGAACAACCGATTACGTA 109442 30 100.0 35 .............................. TCTTTTTGCGCCTTGTGCAACATCGTCCTTTGTGT 109507 30 100.0 33 .............................. GTTGATGTACCCGGCGAGTTCTTCGACGGTCTT 109570 30 100.0 34 .............................. AGAGGTCTGCTATGACGACGACCTCCTAGAACAC 109634 30 100.0 35 .............................. ACCTCATCCCGGTGGCGCTCGGGGAGGTCTCGCTC 109699 30 100.0 35 .............................. TCGAAGGCGGCGCCCGTCTCGGGGTTGTTGGTCGC 109764 30 100.0 35 .............................. GAGGATACCGGATCGGTAGATCTCCCTCCGGTATC 109829 30 100.0 35 .............................. GACCCGAGCGCGGCCTAACGGGGTAGCCTGACATG 109894 30 100.0 37 .............................. CAGCAGGGCTGACCGCCCTCTTCTGACCCCGATCCTG 109961 30 100.0 36 .............................. ATTGTGGACTGGTTTTTGCCGGCCCGATTGGCCCAC 110027 30 100.0 34 .............................. GAAGTCGAAGCCCGCATAACTTGGGTTAACCTTA 110091 30 100.0 35 .............................. AAGGTAGACGAACTGGACGATCGGGAGCCCGAGCT 110156 30 100.0 35 .............................. ACATCCAAGGGACGACCGACAGCACCCAGGGCGAC 110221 30 100.0 36 .............................. GGATTGCGGCGGAGAACAACCCCGAGGAGTTCGCCG 110287 30 100.0 36 .............................. TCGGCCGCGACGATCCGGAGCCCGACCTCGAGTCAA 110353 30 100.0 37 .............................. AGCCGGGCGTTGTGACCGCCCGGCTCAGTCTATCCCC 110420 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ================================================================================================================ ================== 108 30 100.0 37 GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Left flank : AGACGGTCGAGCATCCGCGGTTGGATCGGAAGGTGAGCTATCAGTACCTCATGCGCATCGAGGCGTACAAGCTCAAGAAACACCTGCTGACCGGCGAGACCTACGAGCCGTTCAAACGGTGGTGGTGAGATGTACGTCGTCATGGTGTACGACCTCCGGGCCGATCGAACGCACAAGGCGCTGAAACTCGGGCGCCGATACCTCACCCACGTCCAGAACTCGGTCCTCGAGGGAGAGATCTCCAAGGGCGACCTCGAAAAGCTCCGAAACGAGATTGAGGACCTCCTCGAGCCTGGGGAGTCTACGATCGTCTACGAACTCTCCTCGGATGCGGTCCTCGATCGGACCGTTTACGGGGAGGACCCAACTGACGACCAGCGGTTTCTCTGAGCAAGCCTGGTTTCCGTCGACCCCCCGGGTCAGCGCCAGTATTGATGCTCGACGGAAGTTCTTTGTGAGTACCGCCCTATAGAGCGTCTGCAGCCCGCAAATCGGGCATG # Right flank : CCTTCGAGGTTCTGCCCGATTGCCTCTTGTGGGTCCGGGTTTCAGACGAACCCTCATAGCTAACTCACCTGCTGCATTATCTTAGATGAGCAGCGTCAGGACATCCCTCTCGGGCTACCTGTCGCTATCCACTCACCAAGGCCCATCGCGTCGCTCATCAACTCCTCTTTCGAGAGTTCAATCCCACGATGCTCGTTTTCGAGTTGGTCCGTCACCCACCGAACCTCACCGTCGGTTTCCTCGGCAGAGATCCGATAGTAGATGTCCGCACCCCACCGCCTTCGATCGTAGGATTATCAGCCCCCGCGACTAGCGGGCCGTCTTCGATGTCGACAGCGCGGGCCAGTTTAGTAGCGTCCCCGACACCGATCTGCGTAAGACCGTAGAGGTCACCACTCGGGATCTCGCCTCCGGTCAGGTTGACGGCGACTGCAATCCACCGAAAGCCCTCGGGATTCGGATGCTCGACAACGCCGTCGGGAACCTCGTCGGCTCCCTGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.10,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //