Array 1 36526-35384 **** Predicted by CRISPRDetect 2.4 *** >NZ_AEXN01000002.1 Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00036, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 36525 30 100.0 35 .............................. TTCAATATATCTTTTGTTTCTTTATCTAACATATC 36460 30 100.0 37 .............................. AATTGCTTGTCTATAATTGGCTTGGTTTGTCCAGTTT 36393 30 100.0 35 .............................. AGGAAGATTTTTATCTACTGATATAGATACAAGAT 36328 30 100.0 37 .............................. ACAGAAACTCTTTTCGGAATGAAGGGAAAATATCTTG 36261 30 100.0 36 .............................. CCAAGATTATTCCCAGAACTAAGATAGGGTGCTAAT 36195 30 100.0 33 .............................. TTTGTTAAGCTATCTGGCAACTCTGTAAAAGAT 36132 30 100.0 34 .............................. CTAACAAGCCAATTTCCACCATTTTGACAGTTGG 36068 30 100.0 36 .............................. TACATAGATATTAATGGTCTAGTTACTTTTAAAAAT 36002 30 100.0 36 .............................. TTGCAAGTTACATATATTTTTGTCATTTTCTTTTAC 35936 30 100.0 34 .............................. GAGTTTAAAAGTTCAAGTCCTGCATCTTCTGCGA 35872 30 100.0 36 .............................. ATGTATTTAAGGACATATCCTAGTCCTCCTTAACTT 35806 30 96.7 36 ................A............. ATTATCAAAAATTCGACATCAAACAAGTATCTATAT 35740 30 96.7 35 ................A............. TTTTTGTTGTGCAGCAAAAAATAAAGATGTTCTTC 35675 30 93.3 36 ................A..........G.. GCTTTCTCTAGAGTGCTAGTACCTTTTCCATAAAAA 35609 30 93.3 36 ................A...T......... AAAACAGATAAAAAAGAAATCATAAAAGCCAAACAA 35543 30 96.7 35 ........T..................... ATGGTAAATTTATATTCTAAAATCCCATCGCTTTT 35478 30 93.3 35 ...T....T..................... TCTGTCATTGAATGTATATTTAATTCTCCGTCTAT 35413 30 96.7 0 ...........................G.. | ========== ====== ====== ====== ============================== ===================================== ================== 18 30 98.2 35 GTTGATTAATAACATTTGATGTATTGAAAT # Left flank : AATAAAGCTAGATTGCTATAAATTAATAAAATATATACTAGAAGACAAAGAATTCGAACCTTATTTATTAGAAAGGAAATATTAATGGGAAAAAATTATAATTATATATTTCTATTCTATGATGTTGGAGAAAAAAGAGTAAACAAAGTATTTAAAATCTGCAAAAAATATTTAAATCACCATCAAAATTCAGTATTTAGAGGAGAAATAAGCCCGTCAAAAATTATAGCTCTAAAAAGAGAAATTGAAAAAACAATAAAAAAAGAAGAAGACTTTGTATCAATAATAAAAATGTACAACAAAGAAAGTTTCGAAGAAGAAACAATAGGAAAATATAAATCACTAGGAGAAGATTTTATTCTATAATTCCCAGCAGAATTATAAAAAACTCTAAAAATAAACAAAACAAAAAAACTAAAATAGCTGGTAAAAAAACTAAGGATATTGGAAAAATGGTATACTTAGAATATAAGAGTAAAATAATTGTTTATTTTACTTTG # Right flank : TTATAGCTTAGAACGTAAAAAAGACAACTAAAAGACCTTTATTAATTATGTAAGTGATAAAGTATTTGAGAAATTATATATTTTCTCTTATTAAGGTATGATATATTTAAATGGTTTTTAAATTAATCTTTAAAGGTTAATTATTAGAAAGGAAATTTTATGGAATTTATTGAACTTGTTAAGAATCGTTTTTCTTGTAAAAATTTTTCTGATAAAAAGGTGGAAGATGAGAAGCTTGATCTTATTCTTGAGGCTGGGAGGTTTTCTCCTACTGCTAAGAATAAGCAGATTCAAAGAGTTTATGTTTGCAAGTCGAAAGAGTCGCTTAATAAAATTGATGAATTGACTCCGTGCAGATACAAAGCTCCTCTTGTTCTTCTTGTTGCCTATGATGAGAGTGAGGCTTTTGTTTATCCTGGTGGAAAATATAATTCTGGGGCTGAGGATGCTTCTATTGTTGCAAGTCATATGATTTTGGCTGCAGCAAGTCTTGGGGTGGA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTAATAACATTTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //