Array 1 463-71 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRQK01000094.1 Phocaeicola plebeius strain AF31-28B-AC AF31-28B-AC.Scaf94, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ===================================================================== ================== 462 47 100.0 30 ............................................... TGCGTAATGAATAAGGGAACAGAAATGACT 385 47 100.0 69 ............................................... GGATTCAAAGTCTTCCAAAGTCAGATAAAGGTTGTGATTTGCTTTCATTTTAGTATCTTNNNNNNNNNN 269 47 100.0 29 ............................................... GTGCTTATATACCAAATACATATTGATTA 193 47 100.0 29 ............................................... CAGTATCAAGCGCAGCTGCGCCAACAGTG 117 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ===================================================================== ================== 5 47 100.0 40 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTAGAAACAAC # Left flank : TGCTTTCATTTTAGTATCTTTGAACCATTAGAAACAACAATCAAACTTTATTTGTATCTTTACAATG # Right flank : CTACCAATCTCGCGAAGCGATTCATTACGCCGTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTAG # Questionable array : NO Score: 5.36 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.69, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTAGAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-1.50,-1.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //