Array 1 1633894-1635005 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP074170.1 Enterobacter sp. JBIWA003 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1633894 28 100.0 32 ............................ ACGGTCACCCGGTAGCGAATATCCCCTTTGGA 1633954 28 100.0 32 ............................ ATCGATAGAGTCATAATGTTCACTCCGTGAAT 1634014 28 100.0 32 ............................ ACGTCCACCCATCGACTCAACTGCTGCCAAAT 1634074 28 100.0 32 ............................ GTCGAAGTCCAGCAACTACTGAGAAAGGGGAA 1634134 28 100.0 32 ............................ AGCACGCCCAGGAACTTTGCTGGCAGCTCGCA 1634194 28 100.0 33 ............................ TTACCCCTGTAGCCGGATCGCCATTCGTCCAGC 1634255 28 100.0 33 ............................ TGGATTCGCCAGGGGGGATGCCGGTGTTCGAAT 1634316 28 100.0 32 ............................ TGCCAGCCCGCATATCCGTCGATAACCGCTGC 1634376 28 100.0 32 ............................ AACGGACGGGTTTTAGACCGGAGTTTTTAAAA 1634436 28 100.0 33 ............................ CATTTGGGGTGATAAAGGTGAAGTATGCAAAAT 1634497 28 100.0 32 ............................ TTCAACATCTTGACCACCTTGAACAAACTTAC 1634557 28 100.0 32 ............................ ACGAATTCGCTTTGGTATAGCGCAGGCTGGGG 1634617 28 100.0 32 ............................ GAATGATTGTACGGGGCAAATGGGGGTTAAAC 1634677 28 100.0 33 ............................ TTTCAGCAAGGAATGTGTTGATCGCTCTGTATG 1634738 28 100.0 32 ............................ TAAAAGGTCATCGAGGCCGCCGCCGTCAATAC 1634798 28 100.0 32 ............................ TGAATGGACCGAGCAGCAAAAAAGGCAGGTTA 1634858 28 100.0 32 ............................ GAAAGAGGGGGCAATTGAACGACTGGAGGACG 1634918 28 96.4 32 ..............T............. AATGAGCAACATCGACAAACGCGCACCACATG 1634978 28 78.6 0 A....................AC.CCT. | ========== ====== ====== ====== ============================ ================================= ================== 19 28 98.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CACTCCCCCAAACGCAGCCCGTTTGCCGTTGCCTCGGAGCTTACCTGGAAGAGGTGAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAGGTGGTGGAATTTGAGGACGAAGCGGAACAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACCGAAACGAAATGTGACTACAGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGCGATATGTTGCCGCACCTCACAGGGCTTCTTCATGACATTGCGCATTCGATGGTCGCAGATGTCGTTGCGCCTCAAAGTGCAGAAACGGTAATTCACATTATTTCCTGAGTGCTATCCGAGGCGTCGGGAGGGCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAACATATTGATTTATATGGTGTGGATTTGCGTTCCAGAAAAAAGGGTTTTATGCGTACAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTTGTTTCCTTTC # Right flank : AAAACCAACCCTATGAAACATTCACTCTACCTATTTAAACCTTAATGACATCAAACCTGCACTCTTTATTTTTCACAATAAATAAAAAATTCATTCACGCACTAATTATATTCTAGCCAATATATTATCTGTAAAAATAATGCATTAAATGGAATAGTGATCTTCAGTTTTATTATCACGATAATTACTATTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTCCGATAACATACCAGCATTCAACACCTTGAAATAAAAGCCGTTGCTATGCCTGCAAACAGCATTACCCCAACAGATTTAAAAACTATCCTGCATTCGAAACGCGCCAACATTTATTATCTGGAGAAATGTCGCATCCAGGTAAATGGTGGGCGAGTTGAATATGTCACCCAGGAAGGTAAAGAGTCGTTTTACTGGAATATTCCCATCGCGAATACCACGGCAGTGATGCTGGGAATGGGAACATCCGTTACGCAAATGGCAATGCGGGAGT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1644501-1647113 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP074170.1 Enterobacter sp. JBIWA003 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1644501 28 100.0 32 ............................ CAGCACCCCAAGCGATTAACCGCGGGGCCAGG 1644561 28 100.0 32 ............................ TCGTGACGGAAGTATTGAAGTGTTGGGGTTCG 1644621 28 100.0 32 ............................ CGGCAGCGGCGGAGCTGGTGGCGAGGTCTGAG 1644681 28 100.0 32 ............................ TGCACTCGGTACCCCAACGTTGCAGTCCTCTG 1644741 28 100.0 32 ............................ AGTATCCACCGGCGATTTTACTGACGGCATCG 1644801 28 100.0 32 ............................ TGGAACACGTTGAACAGCAGAGCGTTACGCCT 1644861 28 100.0 32 ............................ AGCTCGCAAAGGAGGGGTATGACCCGATATCA 1644921 28 100.0 32 ............................ TGGGGCTAATTGTGGCGGTGGGCGCTTATGCG 1644981 28 100.0 32 ............................ AGCAGCAGCATTGAAGAATATGACGACTCTTA 1645041 28 100.0 32 ............................ CCCCGCGCGGGCTGGAGATTTTGCGCGAACAT 1645101 28 100.0 32 ............................ GACGGAAGTAAAGCCGGCGGCGGGTGCAAATG 1645161 28 100.0 32 ............................ AGGGAAATATCTGCGGCAGGACTGTTAAGCAC 1645221 28 100.0 33 ............................ TCATAAAGTAAAAAGGGGCGTATTACCCCTTTT 1645282 28 100.0 32 ............................ ACTATACGCGCGTATAGTGGGAAATTGTGGTA 1645342 28 100.0 32 ............................ GGTTAACGTGGAGAAGTCCTCCCAGTCGTATT 1645402 28 100.0 33 ............................ ACGCCAGCGCATCTATTACCGTAAAGCACATAA 1645463 28 100.0 33 ............................ AGCGTATCCCCGCTGGAGCAGTCAGGCTCAACA 1645524 28 100.0 32 ............................ GGTAACGAGATGGATAAAGGCGCGGTAGTCGG 1645584 28 100.0 33 ............................ TGCGTATCCCCGCTGGAGCAGTCAGGCTCAACA 1645645 28 100.0 32 ............................ GGTAACGAGATGGATAAAGGCGCGGTAGTCGG 1645705 28 100.0 32 ............................ TGCAGAGCGTTTCAACTTAACAACGCGTGTTG 1645765 28 100.0 32 ............................ ATTCCTGCAGCTCGTTAGCGTAAAGCGGGTAT 1645825 28 100.0 33 ............................ CTGCCGATTCGTACGCTTGCAGAAGCGCGAGTT 1645886 28 100.0 32 ............................ AGTAGCCCCCGGGGTTTCGCATTCAACCGGTG 1645946 28 100.0 32 ............................ ATTCACAGCTAAATCAAACGACACCGAAGATT 1646006 28 100.0 32 ............................ TGAAGGTGGAACCCTTGTACGCAAACATCTTA 1646066 28 100.0 32 ............................ AGTAGAAATCATATCGAGTCTGGCGCGAGAAC 1646126 28 100.0 32 ............................ GCCCCGCGCCGTTGCTCTTATGTTGCTGTTTT 1646186 28 100.0 34 ............................ CACGGAATATCCAAATTTCCAGCAGGACTGTAAA 1646248 28 100.0 32 ............................ TCGTTTAGTCATGCGACGTCTACGCATAATAA 1646308 28 100.0 32 ............................ ATCCTGTGCAAGAGCAAGCTGAAAATCCTTCC 1646368 28 100.0 32 ............................ TTACGCTAATTTCTTATACACGCGAGGCTCAT 1646428 28 100.0 33 ............................ AGAACGCGGGCTTCGAGTTGGCGCTTAGCTTTG 1646489 28 100.0 32 ............................ GCAATCCAGCTCTGATGGTCATATAAATCGCG 1646549 28 100.0 33 ............................ ATGTTCATGGGCTCGCGCTGATACGGCGCATTA 1646610 28 100.0 32 ............................ GGCAGATACAGAATGGGGGAGTGGCACTGATT 1646670 28 100.0 32 ............................ ACGTCCAGATCCCCTAATTTGCCCGACCGCAA 1646730 28 100.0 32 ............................ TTAGCGTGAAATTATGGTTTGAAAGTTAATCT 1646790 28 100.0 32 ............................ AGCGAGGTGAGCACTTGATTAATCTCTTCGAG 1646850 28 100.0 32 ............................ AGCGAGGTGAGCACTTGATTAATCTCTTCGAG 1646910 28 100.0 32 ............................ TAGCGCATCTGTTCGTATTCGGTAACCCGCCC 1646970 28 96.4 32 ................A........... GGCAACAGCCAGCTCACGCGTAGGGAAAGAAG 1647030 28 92.9 27 ...............C....T....... ATAGAAAATAAGGTCTCCCTTTACTCT C [1647055] 1647086 28 67.9 0 C.A.....T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================== ================== 44 28 99.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGGGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACGCTGACGGGCAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCAGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTTACCTCCTGAGTAATGTCATTTGTCATAGACAAGTATAGTCATTTGTCAGAGGGAGTGGAATGGGCGTTTTTTGTGCGGGTGGTTAATGCGAAGAAAAGTGTTTTGACCCTAATTTTTAGTGGTTGTGTAATAGATTGATTTTAAATGATTATTTGGGTGGGTGAAAAAGAGGGTGAGAGAAGGGTTTTTAGCTTTTTTTGTATGCAAATCATAAGGGTGTGGAGATATTATTTCA # Right flank : GCTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACTGCACCACAAAAAAATAAGGCCGGGGAAAACCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //