Array 1 88761-86168 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNHK01000002.1 Brevibacterium paucivorans strain UMB1301 ERR1203651.17957_1_63.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 88760 29 100.0 32 ............................. AGTTGGGTGCCGAGTTGGAGCAGGCCGGGTTA 88699 29 96.6 32 ............................T GGTGTGCCGTGTGGTTACCGATTTCTACGAAG 88638 29 100.0 32 ............................. TCAACGCTGGTATTGACGCTTCCTGCCGTATC 88577 29 100.0 32 ............................. GGTGACAGCGTTTAAGGCGCTTAACGCGGCCA 88516 29 100.0 32 ............................. TTTGCTGTGTCTGGCATTCTTGGCTCCTTGTA 88455 29 100.0 32 ............................. TCTGCTTTTTCGATCACTCCCCAAATGGTCGA 88394 29 100.0 32 ............................. TGCAAATAGTGGTCTAGCGTTCCGTCCCTGCG 88333 29 96.6 33 ............................G GAGCACCTATAATGTCTTGGCACCTCGCACCAT 88271 29 100.0 32 ............................. ATAACCCCCTGGATCACCGAAGCAGACTACCC 88210 29 100.0 32 ............................. CCGTCTGGCAGAAGCCGGGTAATGAGCTTTCC 88149 29 96.6 32 ............................T AGCACCGTAGCGAACAATGAAAATGCTGTTTG 88088 29 100.0 32 ............................. CACTGTCCCTGACGAGTGATTGCTGGATAACT 88027 29 100.0 32 ............................. AAGACACCTACGTGGTGTCTCGGTTCCGAATC 87966 29 100.0 32 ............................. AGTTGAGAACCTTGTCATGTACGGCCGCGCAT 87905 29 96.6 32 ............................G CAATGATCAGACGAGACGGATACACGGTTTTC 87844 29 100.0 32 ............................. GATCATTGAGATGGCCCGCGTAAACACGATAG 87783 29 100.0 32 ............................. GTAGACGACTGCTGTGACTGCTGTTGTGACTG 87722 29 100.0 32 ............................. TCAACCATCACGACCAGCCCCCTCCAGGCCCG 87661 29 100.0 33 ............................. GCAACGCGTACAACCTGAACAAGCAGGGTTACC 87599 29 100.0 32 ............................. CCGTGGATTGTGATACCAAGCTGGTCTTCAAG 87538 29 100.0 32 ............................. TGAGCCGGGGACAGCTGCGCGACAGCCCCCAT 87477 29 100.0 32 ............................. TCCAACATGAGAGCGACCCCGGCGCGGTCGTA 87416 29 100.0 32 ............................. AGGAACCCGCTCATGCTAAAGCAACGGTCCAG 87355 29 96.6 32 ............................T TTGACCCGGTGAGTCTGGGGTACGTGTGGACG 87294 29 100.0 32 ............................. GCATTCTTCAGAATCCCAGGGATCACCCGTAA 87233 29 100.0 32 ............................. GGCCACGGGCATGGCCTCGAGTGGTTCTGTGA 87172 29 100.0 32 ............................. GGATCTGGCAGGGTATCGTCTGGGCTTTCCGG 87111 29 100.0 32 ............................. GAAGTCTTTGGCTTCATTATGCGTTGCGCCAT 87050 29 100.0 32 ............................. AGTTTCACGGACACGACTAGCACGCTCTAAAC 86989 29 96.6 32 ................C............ CCTGACTGGGCGCGACAAGGCGGGTCAAATGA 86928 29 100.0 32 ............................. GCCGCCCGGTTCGTCCAAGACCATTCCGGCGC 86867 29 100.0 32 ............................. GCTATCGACATCACCGCAAAAGGAATCAACGT 86806 29 100.0 32 ............................. AGAGCTGTGATCTGTCCGGCTGGTTTGTGATG 86745 29 100.0 32 ............................. ACGCTTGCCACAGGTGCCTACGCCGTGGCAAC 86684 29 96.6 32 ............................G TAATGCCAAAATCACTCGCTGATGGCCGTACC 86623 29 100.0 32 ............................. GCGGGTGGTGAGAAACTGCCGGTGGATTATCG 86562 29 100.0 32 ............................. TGGCGCTCAGGATAAAACTTCTCTTTCCTTGA 86501 29 100.0 32 ............................. ACAACCGCACACGCCAACGCGCCACGCAACGT 86440 29 100.0 32 ............................. CTTGGCTGGTCGAGTACGTTTTCACCGACCAC 86379 29 96.6 32 ...........G................. AAGCAACCGCGCAATACGTTTTGCGTCGCCTC 86318 29 93.1 32 .........T.G................. GAACAGTCGAAGGACGCGACCGGGCAATTTGC 86257 29 89.7 32 ...........G.............A..T TGCCCGTCGTGTCGAAAGTTTGATGATTTTCC 86196 29 96.6 0 ...........G................. | ========== ====== ====== ====== ============================= ================================= ================== 43 29 98.9 32 GTGTTCCCCACACCCGTGGGGATGAGCCC # Left flank : GAGCTGTCGTTATGGTCTGGGCGAGGCGAACAACGTTTGCCCAGTGGCGAGAATCATTGGGAACGGTTCTCATGATTGTCATTGTGTTGTCGTCATGCCCAACCGGCTTACGAGGCGATTTAACCAAGTGGGCGCTTGAGGTTTCAGCAGGCGTTTTCGTTGGCAACGTGAGTGCGCGAGTCAGGGAGCTGCTGTGGCAGCGGATCGAAGAAACAGCAGGCACCGGACAAGCTCTCATGGTGTGGCCAGCACAAAACGAGCAGCGGTTGCAGTTCAGGACGAAAGAACACAAATGGGAACCTGTCGACTTAGACGGGCTCACTTTCATGAGACGACCCGCACCAGAGTCCGGGTACGGGCGAAAAACCATGCAAGGCGGTTGGAGCAAAGCGCGTGCCATTAGAAACGCGTCTAAGTACTCCAAATATAGGTAGGTCTTTCTTCAACCGAAAGTGAATGAGCTGGGCATGCAATCCTGGTATCGTTGCTGATCAATTAGT # Right flank : AGTCACGCTAAGTTAGGGAGTACACGTGGATCGAGTGGAAGATGCCGGGGTTTCCTTTGGTTTTTTATGAAGTTAGGGAGTGCACGTGGATCGAGTACGTTTCCGGGATTTGAAACCATATGAGGTCGTTGACAGTCTCGACGACTTGAAAGGGCCATTTCACGAGCCTATCCGCCTGCCGATCTGGGTTCGGTGGATTGACGACGGCGACATTGATGTGACTGAGCTCGGCGGCGCGCGCCTCGCCTATCAAGCCCTTCTTGCAGAAGGTACCACCGAGATTCAGGCGCAACTGATAAACAAAGACAGATTGCTTCAGGTATGGCCACATTTGATTCTCGATTCCCGTGTACGGGACCTGTGGGAAGGGCGCTTCCCTGAGCTGAGGTGCTCCGCACACCCGTGGGGATGAGCCCACCAGCGGGAGCGACAGCGGATACGCGAGATCGTGTTCCCCACGCCTGTGGGGATGAGCGACACGATGGCGACAAGTGTGACGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACACCCGTGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //