Array 1 95060-94792 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVOG010000003.1 Acinetobacter bereziniae strain ACIN00190 ACIN00190_c0003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 95059 28 100.0 32 ............................ TGAAGCAAAGCAGGCATTCGATGCAATGGGTG 94999 28 100.0 32 ............................ GTTTGAGGAAGCATTCCCAATACCAGCACACT 94939 28 100.0 32 ............................ TTTCAAAGCTAGTGCATTCGCAACTTCACTGG 94879 28 100.0 32 ............................ TCATTGATGTTAAAGAGGGTTACAGTCCAACA 94819 28 92.9 0 ..C..................C...... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 98.6 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACTAGTTTTTATTGAACTTTAACATCATATAAAAATGATCTTTTTTAGCAGTTTATTGAGCTGCAAAGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTAATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTGAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGTGAACAATTTAGGGAAATATGCTTTTAATAGAATTACGATTGTTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTGATCTAAAATTATA # Right flank : AATTGTTAAACCTCTCTTATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAAAAAGATCAAAATTAAAAAAATGAATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCAATGACGACGCTAAATATTTCTCAAATTTTTGAAAAATTTTGTTTTTATCAAGAAAAGTACCTTTCTATCCTGCA # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [85.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 11688-12015 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVOG010000029.1 Acinetobacter bereziniae strain ACIN00190 ACIN00190_c0029, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 11688 28 96.4 32 ...........T................ AGAAATGGTGCTTCGAGAGGCGATTTGGTGAA 11748 28 100.0 32 ............................ ACAATCTTTAACAGTTGTAATTTCTACTTTAG 11808 28 100.0 32 ............................ GTCCACCCCCACGGTTCCAACGAGGGAATTGC 11868 28 100.0 32 ............................ TACATATGCTGCTTGGGGCATCAAAAAAGCAT 11928 28 100.0 32 ............................ TTGCTAACGTTTTGAATTGCCGAAAAGTCTGA 11988 28 78.6 0 ...........T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================ ================== 6 28 95.8 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : GCTTTAAATGATGCCAAATTTAGTAAACGGATCTCAGATAGACAATTTAATTTAATTCAAACAATTATGTTTGTAACAGGACAAACGAAAAAGTTTTTAAACCAAGCTGAGTTATATCGAATACCACAAATCCAAGTTTTATATACAGGTAAAACAGAACGTACTTTTTATCGTGATATTGCTAGATTGGTTGAGCTAAACTTTTTAGATGATCAAGATGGATTGATTGTTGTTGGCGAGTCAGTTTAAATATGATGAGTTTATAAATTGCTTGGCAATATTTTATAAATTTTTTGCAAATGAAGCAAAAGTAGGAAAATTTGGATTGTATAGATTTTAGTGAAACAGAAGGTAATTCTAAAATTTTACCCCAATATTTTTTAGCTCTTTAACAACTTAATAAAATCAATAAGTTATAATTGTAAGTAGAAACTTGGGTCATTTGATGATTTTAAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : ATATAAACGCCTTAACATCTTCGCTAAATTTAGGAAAGTACAAACGATATGGAATAATTTTTATAGTAAATAAAATACAATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTAGCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACAC # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //